RNA–Protein interactions for RNA: ENST00000395856.3

NCOA1-203, Transcript of nuclear receptor coactivator 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCOA1, Length 6,828 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCOA1-203ENST00000395856 VSTM4Q8IW00 320 aa4.26□□□□□ -1.73
NCOA1-203ENST00000395856 AHI1Q8N157 1196 aa4.26□□□□□ -1.73
NCOA1-203ENST00000395856 DYNLL2Q96FJ2 89 aa4.26□□□□□ -1.73
NCOA1-203ENST00000395856 ZFP42Q96MM3 310 aa4.26□□□□□ -1.73
NCOA1-203ENST00000395856 AIFM3Q96NN9 605 aa4.26□□□□□ -1.73
NCOA1-203ENST00000395856 BRIP1Q9BX63 1249 aa4.26□□□□□ -1.73
NCOA1-203ENST00000395856 FAM49AQ9H0Q0 323 aaPredicted RBP4.26□□□□□ -1.73
NCOA1-203ENST00000395856 RPF1Q9H9Y2 349 aaKnown RBP4.26□□□□□ -1.73
NCOA1-203ENST00000395856 RWDD2AQ9UIY3 292 aa4.26□□□□□ -1.73
NCOA1-203ENST00000395856 PRG3Q9Y2Y8 225 aaPredicted RBP4.26□□□□□ -1.73
NCOA1-203ENST00000395856 PCDHB9Q9Y5E1 797 aa4.26□□□□□ -1.73
NCOA1-203ENST00000395856 PCDHA1Q9Y5I3 950 aa4.26□□□□□ -1.73
NCOA1-203ENST00000395856 ZMYM4Q5VZL5 1548 aa4.26□□□□□ -1.73
NCOA1-203ENST00000395856 ADGRL1O94910 1474 aa4.26□□□□□ -1.73
NCOA1-203ENST00000395856 ARHGAP10A1A4S6 786 aa4.26□□□□□ -1.73
NCOA1-203ENST00000395856 H0Y626 953 aa4.26□□□□□ -1.73
NCOA1-203ENST00000395856 M0QYV0 167 aa4.26□□□□□ -1.73
NCOA1-203ENST00000395856 GSNP06396 782 aa4.26□□□□□ -1.73
NCOA1-203ENST00000395856 CAPZA2P47755 286 aa4.26□□□□□ -1.73
NCOA1-203ENST00000395856 SERPINB4P48594 390 aa4.26□□□□□ -1.73
NCOA1-203ENST00000395856 TRIM32Q13049 653 aa4.26□□□□□ -1.73
NCOA1-203ENST00000395856 MAPRE1Q15691 268 aaKnown RBP4.26□□□□□ -1.73
NCOA1-203ENST00000395856 ZNF790Q6PG37 636 aa4.26□□□□□ -1.73
NCOA1-203ENST00000395856 ISLR2Q6UXK2 745 aa4.26□□□□□ -1.73
NCOA1-203ENST00000395856 CHMP1BQ7LBR1 199 aa4.26□□□□□ -1.73
NCOA1-203ENST00000395856 ZNF589Q86UQ0 364 aaPredicted RBP4.26□□□□□ -1.73
NCOA1-203ENST00000395856 IFNEQ86WN2 208 aa4.26□□□□□ -1.73
NCOA1-203ENST00000395856 CHURC1Q8WUH1 139 aa4.26□□□□□ -1.73
NCOA1-203ENST00000395856 LSG1Q9H089 658 aaKnown RBP4.26□□□□□ -1.73
NCOA1-203ENST00000395856 KLHL25Q9H0H3 589 aa4.26□□□□□ -1.73
NCOA1-203ENST00000395856 MRPL47Q9HD33 250 aaKnown RBP4.26□□□□□ -1.73
NCOA1-203ENST00000395856 SMARCAL1Q9NZC9 954 aa4.26□□□□□ -1.73
NCOA1-203ENST00000395856 PKD2L2Q9NZM6 624 aa4.26□□□□□ -1.73
NCOA1-203ENST00000395856 STK17AQ9UEE5 414 aa4.26□□□□□ -1.73
NCOA1-203ENST00000395856 ARIH1Q9Y4X5 557 aaPredicted RBP4.26□□□□□ -1.73
NCOA1-203ENST00000395856 ABCC12Q96J65 1359 aa4.26□□□□□ -1.73
NCOA1-203ENST00000395856 RNF103O00237 685 aa4.26□□□□□ -1.73
NCOA1-203ENST00000395856 KCNQ3O43525 872 aa4.26□□□□□ -1.73
NCOA1-203ENST00000395856 RHOBTB1O94844 696 aa4.26□□□□□ -1.73
NCOA1-203ENST00000395856 PLA2G4BP0C869 781 aa4.26□□□□□ -1.73
NCOA1-203ENST00000395856 IL10P22301 178 aa4.26□□□□□ -1.73
NCOA1-203ENST00000395856 MAPK10P53779 464 aa4.26□□□□□ -1.73
NCOA1-203ENST00000395856 NLRP11P59045 1033 aaKnown RBP4.26□□□□□ -1.73
NCOA1-203ENST00000395856 CSNK2BP67870 215 aa4.26□□□□□ -1.73
NCOA1-203ENST00000395856 ROR1Q01973 937 aa4.26□□□□□ -1.73
NCOA1-203ENST00000395856 ADCK2Q7Z695 626 aa4.26□□□□□ -1.73
NCOA1-203ENST00000395856 MCF2L2Q86YR7 1114 aa4.26□□□□□ -1.73
NCOA1-203ENST00000395856 SH2D3CQ8N5H7 860 aa4.26□□□□□ -1.73
NCOA1-203ENST00000395856 SNX31Q8N9S9 440 aa4.26□□□□□ -1.73
NCOA1-203ENST00000395856 OR2W6PQ8NHA6 318 aa4.26□□□□□ -1.73
NCOA1-203ENST00000395856 GNL3Q9BVP2 549 aaKnown RBP eCLIP4.26□□□□□ -1.73
NCOA1-203ENST00000395856 UBAP1Q9NZ09 502 aa4.26□□□□□ -1.73
NCOA1-203ENST00000395856 NPHP3-ACAD11A0A0J9YXS1 232 aa4.25□□□□□ -1.73
NCOA1-203ENST00000395856 PHF20L1A8MW92 1017 aa4.25□□□□□ -1.73
NCOA1-203ENST00000395856 STXBP3O00186 592 aa4.25□□□□□ -1.73
NCOA1-203ENST00000395856 AIM2O14862 343 aa4.25□□□□□ -1.73
NCOA1-203ENST00000395856 CHUKO15111 745 aa4.25□□□□□ -1.73
NCOA1-203ENST00000395856 FOSP01100 380 aaPredicted RBP4.25□□□□□ -1.73
NCOA1-203ENST00000395856 FGAP02671 866 aa4.25□□□□□ -1.73
NCOA1-203ENST00000395856 CHN1P15882 459 aa4.25□□□□□ -1.73
NCOA1-203ENST00000395856 CSE1LP55060 971 aaKnown RBP4.25□□□□□ -1.73
NCOA1-203ENST00000395856 PEX3P56589 373 aa4.25□□□□□ -1.73
NCOA1-203ENST00000395856 GRIN1Q05586 938 aa4.25□□□□□ -1.73
NCOA1-203ENST00000395856 DNAJC3Q13217 504 aa4.25□□□□□ -1.73
NCOA1-203ENST00000395856 CUL1Q13616 776 aa4.25□□□□□ -1.73
NCOA1-203ENST00000395856 ARL13BQ3SXY8 428 aa4.25□□□□□ -1.73
NCOA1-203ENST00000395856 C9orf131Q5VYM1 1079 aa4.25□□□□□ -1.73
NCOA1-203ENST00000395856 SIX5Q8N196 739 aa4.25□□□□□ -1.73
NCOA1-203ENST00000395856 ZNF274Q96GC6 653 aaPredicted RBP4.25□□□□□ -1.73
NCOA1-203ENST00000395856 SRPK1Q96SB4 655 aaKnown RBP4.25□□□□□ -1.73
NCOA1-203ENST00000395856 SP110Q9HB58 689 aa4.25□□□□□ -1.73
NCOA1-203ENST00000395856 EMILIN3Q9NT22 766 aa4.25□□□□□ -1.73
NCOA1-203ENST00000395856 TBC1D23Q9NUY8 699 aa4.25□□□□□ -1.73
NCOA1-203ENST00000395856 STOML1Q9UBI4 398 aa4.25□□□□□ -1.73
NCOA1-203ENST00000395856 MCM8Q9UJA3 840 aa4.25□□□□□ -1.73
NCOA1-203ENST00000395856 ADAM21Q9UKJ8 722 aa4.25□□□□□ -1.73
NCOA1-203ENST00000395856 GRXCR2A6NFK2 248 aa4.25□□□□□ -1.73
NCOA1-203ENST00000395856 C5orf58C9J3I9 102 aa4.25□□□□□ -1.73
NCOA1-203ENST00000395856 SMAPO00193 183 aa4.25□□□□□ -1.73
NCOA1-203ENST00000395856 SRP72O76094 671 aaKnown RBP4.25□□□□□ -1.73
NCOA1-203ENST00000395856 ATP1A1P05023 1023 aaKnown RBP4.25□□□□□ -1.73
NCOA1-203ENST00000395856 BRAFP15056 766 aa4.25□□□□□ -1.73
NCOA1-203ENST00000395856 RFX3P48380 749 aa4.25□□□□□ -1.73
NCOA1-203ENST00000395856 BPIFB4P59827 614 aa4.25□□□□□ -1.73
NCOA1-203ENST00000395856 SLC44A4Q53GD3 710 aa4.25□□□□□ -1.73
NCOA1-203ENST00000395856 CC2D1AQ6P1N0 951 aaPredicted RBP4.25□□□□□ -1.73
NCOA1-203ENST00000395856 KRT26Q7Z3Y9 468 aa4.25□□□□□ -1.73
NCOA1-203ENST00000395856 DDX53Q86TM3 631 aaKnown RBP4.25□□□□□ -1.73
NCOA1-203ENST00000395856 TRIM69Q86WT6 500 aa4.25□□□□□ -1.73
NCOA1-203ENST00000395856 YAF2Q8IY57 180 aa4.25□□□□□ -1.73
NCOA1-203ENST00000395856 OR8H2Q8N162 312 aa4.25□□□□□ -1.73
NCOA1-203ENST00000395856 ARL10Q8N8L6 244 aa4.25□□□□□ -1.73
NCOA1-203ENST00000395856 ZNF473Q8WTR7 871 aaKnown RBP4.25□□□□□ -1.73
NCOA1-203ENST00000395856 GLMNQ92990 594 aa4.25□□□□□ -1.73
NCOA1-203ENST00000395856 DDX47Q9H0S4 455 aaKnown RBP4.25□□□□□ -1.73
NCOA1-203ENST00000395856 GOLPH3LQ9H4A5 285 aa4.25□□□□□ -1.73
NCOA1-203ENST00000395856 ATP6V0A4Q9HBG4 840 aa4.25□□□□□ -1.73
NCOA1-203ENST00000395856 ZSWIM6Q9HCJ5 1215 aa4.25□□□□□ -1.73
NCOA1-203ENST00000395856 DIABLOQ9NR28 239 aa4.25□□□□□ -1.73
NCOA1-203ENST00000395856 MRPL39Q9NYK5 338 aaKnown RBP4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms