RNA–Protein interactions for RNA: ENST00000395795.5

CXCL12-206, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 404 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-206ENST00000395795 USP15Q9Y4E8 981 aaPredicted RBP18.02■□□□□ 0.48
CXCL12-206ENST00000395795 DGAT1O75907 488 aa18.01■□□□□ 0.47
CXCL12-206ENST00000395795 SKIP12755 728 aa18.01■□□□□ 0.47
CXCL12-206ENST00000395795 SSTR3P32745 418 aaPredicted RBP18.01■□□□□ 0.47
CXCL12-206ENST00000395795 SLC11A1P49279 550 aa18.01■□□□□ 0.47
CXCL12-206ENST00000395795 NBR1Q14596 966 aa18.01■□□□□ 0.47
CXCL12-206ENST00000395795 RSPH1Q8WYR4 309 aa18.01■□□□□ 0.47
CXCL12-206ENST00000395795 IGSF21Q96ID5 467 aa18.01■□□□□ 0.47
CXCL12-206ENST00000395795 NFKBIZQ9BYH8 718 aa18.01■□□□□ 0.47
CXCL12-206ENST00000395795 ZBP1Q9H171 429 aa18.01■□□□□ 0.47
CXCL12-206ENST00000395795 NGRNQ9NPE2 291 aaKnown RBP18.01■□□□□ 0.47
CXCL12-206ENST00000395795 GPRC5CQ9NQ84 441 aa18.01■□□□□ 0.47
CXCL12-206ENST00000395795 SH2B1Q9NRF2 756 aaPredicted RBP18.01■□□□□ 0.47
CXCL12-206ENST00000395795 FAM50BQ9Y247 325 aa18.01■□□□□ 0.47
CXCL12-206ENST00000395795 LOC730098B7Z3J9 87 aa18■□□□□ 0.47
CXCL12-206ENST00000395795 EFEMP2O95967 443 aa18■□□□□ 0.47
CXCL12-206ENST00000395795 NCLP19338 710 aaKnown RBP18■□□□□ 0.47
CXCL12-206ENST00000395795 U2AF2P26368 475 aaKnown RBP eCLIP18■□□□□ 0.47
CXCL12-206ENST00000395795 HMGN5P82970 282 aaKnown RBP18■□□□□ 0.47
CXCL12-206ENST00000395795 MXD4Q14582 209 aaPredicted RBP18■□□□□ 0.47
CXCL12-206ENST00000395795 CBX2Q14781 532 aaPredicted RBP18■□□□□ 0.47
CXCL12-206ENST00000395795 TMEM31Q5JXX7 168 aa18■□□□□ 0.47
CXCL12-206ENST00000395795 GLB1LQ6UWU2 654 aa18■□□□□ 0.47
CXCL12-206ENST00000395795 NOSTRINQ8IVI9 506 aa18■□□□□ 0.47
CXCL12-206ENST00000395795 FEZF2Q8TBJ5 459 aa18■□□□□ 0.47
CXCL12-206ENST00000395795 BSNDQ8WZ55 320 aa18■□□□□ 0.47
CXCL12-206ENST00000395795 CPB2Q96IY4 423 aa18■□□□□ 0.47
CXCL12-206ENST00000395795 POLR3CQ9BUI4 534 aaPredicted RBP18■□□□□ 0.47
CXCL12-206ENST00000395795 TUFT1Q9NNX1 390 aa18■□□□□ 0.47
CXCL12-206ENST00000395795 ENTPD7Q9NQZ7 604 aa18■□□□□ 0.47
CXCL12-206ENST00000395795 MIOSQ9NXC5 875 aa18■□□□□ 0.47
CXCL12-206ENST00000395795 PUF60Q9UHX1 559 aaKnown RBP18■□□□□ 0.47
CXCL12-206ENST00000395795 CDH22Q9UJ99 828 aa18■□□□□ 0.47
CXCL12-206ENST00000395795 INPP5FQ9Y2H2 1132 aa18■□□□□ 0.47
CXCL12-206ENST00000395795 TTLL13PA6NNM8 815 aa17.99■□□□□ 0.47
CXCL12-206ENST00000395795 B4GALT5O43286 388 aa17.99■□□□□ 0.47
CXCL12-206ENST00000395795 CLASP2O75122 1294 aaKnown RBP17.99■□□□□ 0.47
CXCL12-206ENST00000395795 ZC3H11AO75152 810 aaKnown RBP eCLIP17.99■□□□□ 0.47
CXCL12-206ENST00000395795 OR52Z1P0C646 297 aa17.99■□□□□ 0.47
CXCL12-206ENST00000395795 ARF4P18085 180 aaPredicted RBP17.99■□□□□ 0.47
CXCL12-206ENST00000395795 TECP42680 631 aa17.99■□□□□ 0.47
CXCL12-206ENST00000395795 KRT17Q04695 432 aa17.99■□□□□ 0.47
CXCL12-206ENST00000395795 ORC2Q13416 577 aaPredicted RBP17.99■□□□□ 0.47
CXCL12-206ENST00000395795 TTC38Q5R3I4 469 aa17.99■□□□□ 0.47
CXCL12-206ENST00000395795 ANKRD54Q6NXT1 300 aa17.99■□□□□ 0.47
CXCL12-206ENST00000395795 POTEGQ6S5H5 508 aa17.99■□□□□ 0.47
CXCL12-206ENST00000395795 DDX53Q86TM3 631 aaKnown RBP17.99■□□□□ 0.47
CXCL12-206ENST00000395795 GSTCDQ8NEC7 633 aa17.99■□□□□ 0.47
CXCL12-206ENST00000395795 AUTS2Q8WXX7 1259 aa17.99■□□□□ 0.47
CXCL12-206ENST00000395795 POLR3FQ9H1D9 316 aaPredicted RBP17.99■□□□□ 0.47
CXCL12-206ENST00000395795 RSAD1Q9HA92 442 aa17.99■□□□□ 0.47
CXCL12-206ENST00000395795 DBR1Q9UK59 544 aaKnown RBP17.99■□□□□ 0.47
CXCL12-206ENST00000395795 HES2Q9Y543 173 aa17.99■□□□□ 0.47
CXCL12-206ENST00000395795 IPPQ9Y573 584 aa17.99■□□□□ 0.47
CXCL12-206ENST00000395795 IRAK3Q9Y616 596 aa17.99■□□□□ 0.47
CXCL12-206ENST00000395795 DCXO43602 365 aa17.98■□□□□ 0.47
CXCL12-206ENST00000395795 USO1O60763 962 aaKnown RBP17.98■□□□□ 0.47
CXCL12-206ENST00000395795 LILRB3O75022 631 aa17.98■□□□□ 0.47
CXCL12-206ENST00000395795 EDN1P05305 212 aa17.98■□□□□ 0.47
CXCL12-206ENST00000395795 RPA1P27694 616 aa17.98■□□□□ 0.47
CXCL12-206ENST00000395795 ALDH7A1P49419 539 aaKnown RBP17.98■□□□□ 0.47
CXCL12-206ENST00000395795 PCBP1Q15365 356 aaKnown RBP eCLIP17.98■□□□□ 0.47
CXCL12-206ENST00000395795 SAFBQ15424 915 aaKnown RBP eCLIP17.98■□□□□ 0.47
CXCL12-206ENST00000395795 IL17AQ16552 155 aa17.98■□□□□ 0.47
CXCL12-206ENST00000395795 TMC7Q7Z402 723 aa17.98■□□□□ 0.47
CXCL12-206ENST00000395795 RNF135Q8IUD6 432 aa17.98■□□□□ 0.47
CXCL12-206ENST00000395795 VPS52Q8N1B4 723 aa17.98■□□□□ 0.47
CXCL12-206ENST00000395795 HCFC2Q9Y5Z7 792 aa17.98■□□□□ 0.47
CXCL12-206ENST00000395795 TECTAO75443 2155 aa17.97■□□□□ 0.47
CXCL12-206ENST00000395795 CTSAP10619 480 aa17.97■□□□□ 0.47
CXCL12-206ENST00000395795 AXLP30530 894 aa17.97■□□□□ 0.47
CXCL12-206ENST00000395795 TRAPPC10P48553 1259 aa17.97■□□□□ 0.47
CXCL12-206ENST00000395795 FXR2P51116 673 aaKnown RBP eCLIP17.97■□□□□ 0.47
CXCL12-206ENST00000395795 DSC1Q08554 894 aa17.97■□□□□ 0.47
CXCL12-206ENST00000395795 SMC1AQ14683 1233 aaKnown RBP17.97■□□□□ 0.47
CXCL12-206ENST00000395795 HERC4Q5GLZ8 1057 aaPredicted RBP17.97■□□□□ 0.47
CXCL12-206ENST00000395795 CDCA2Q69YH5 1023 aaPredicted RBP17.97■□□□□ 0.47
CXCL12-206ENST00000395795 SLC22A17Q8WUG5 538 aa17.97■□□□□ 0.47
CXCL12-206ENST00000395795 PGBD4Q96DM1 585 aa17.97■□□□□ 0.47
CXCL12-206ENST00000395795 CSRNP2Q9H175 543 aa17.97■□□□□ 0.47
CXCL12-206ENST00000395795 MARCH5Q9NX47 278 aa17.97■□□□□ 0.47
CXCL12-206ENST00000395795 PCDHB6Q9Y5E3 794 aa17.97■□□□□ 0.47
CXCL12-206ENST00000395795 CNTNAP2Q9UHC6 1331 aa17.97■□□□□ 0.47
CXCL12-206ENST00000395795 A0A1B0GUA9 196 aa17.96■□□□□ 0.47
CXCL12-206ENST00000395795 F8W810 466 aa17.96■□□□□ 0.47
CXCL12-206ENST00000395795 INO80B-WBP1J3KQ70 363 aa17.96■□□□□ 0.47
CXCL12-206ENST00000395795 LLGL2Q6P1M3 1020 aa17.96■□□□□ 0.47
CXCL12-206ENST00000395795 PPP4R3CPQ6ZMV5 832 aa17.96■□□□□ 0.47
CXCL12-206ENST00000395795 CDR2LQ86X02 465 aaPredicted RBP17.96■□□□□ 0.47
CXCL12-206ENST00000395795 COLGALT2Q8IYK4 626 aa17.96■□□□□ 0.47
CXCL12-206ENST00000395795 RNF168Q8IYW5 571 aaPredicted RBP17.96■□□□□ 0.47
CXCL12-206ENST00000395795 IGSF22Q8N9C0 903 aa17.96■□□□□ 0.47
CXCL12-206ENST00000395795 CCDC51Q96ER9 411 aa17.96■□□□□ 0.47
CXCL12-206ENST00000395795 TMEM169Q96HH4 297 aa17.96■□□□□ 0.47
CXCL12-206ENST00000395795 ZFP42Q96MM3 310 aa17.96■□□□□ 0.47
CXCL12-206ENST00000395795 NACC1Q96RE7 527 aa17.96■□□□□ 0.47
CXCL12-206ENST00000395795 GAD1Q99259 594 aa17.96■□□□□ 0.47
CXCL12-206ENST00000395795 PHF7Q9BWX1 381 aaPredicted RBP17.96■□□□□ 0.47
CXCL12-206ENST00000395795 FZD8Q9H461 694 aa17.96■□□□□ 0.47
CXCL12-206ENST00000395795 NXF3Q9H4D5 531 aaKnown RBP17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms