RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 SPIRE2Q8WWL2 714 aa18.26■□□□□ 0.51
CXCL1-201ENST00000395761 NTPCRQ9BSD7 190 aaKnown RBP18.26■□□□□ 0.51
CXCL1-201ENST00000395761 TRAIPQ9BWF2 469 aa18.26■□□□□ 0.51
CXCL1-201ENST00000395761 ELAC1Q9H777 363 aaKnown RBP18.26■□□□□ 0.51
CXCL1-201ENST00000395761 CERS4Q9HA82 394 aa18.26■□□□□ 0.51
CXCL1-201ENST00000395761 C17orf75Q9HAS0 396 aa18.26■□□□□ 0.51
CXCL1-201ENST00000395761 FAM105AQ9NUU6 356 aa18.26■□□□□ 0.51
CXCL1-201ENST00000395761 RNF19AQ9NV58 838 aa18.26■□□□□ 0.51
CXCL1-201ENST00000395761 FAM13BQ9NYF5 915 aa18.26■□□□□ 0.51
CXCL1-201ENST00000395761 ODF2LQ9ULJ1 636 aa18.26■□□□□ 0.51
CXCL1-201ENST00000395761 A0A1B0GVL5 298 aa18.25■□□□□ 0.51
CXCL1-201ENST00000395761 LINC01553A4QN01 128 aa18.25■□□□□ 0.51
CXCL1-201ENST00000395761 FAM13AO94988 1023 aa18.25■□□□□ 0.51
CXCL1-201ENST00000395761 PRKCBP05771 671 aa18.25■□□□□ 0.51
CXCL1-201ENST00000395761 AXLP30530 894 aa18.25■□□□□ 0.51
CXCL1-201ENST00000395761 ZNF131P52739 623 aa18.25■□□□□ 0.51
CXCL1-201ENST00000395761 EFNA5P52803 228 aa18.25■□□□□ 0.51
CXCL1-201ENST00000395761 GRIN2CQ14957 1233 aa18.25■□□□□ 0.51
CXCL1-201ENST00000395761 MAPK6Q16659 721 aa18.25■□□□□ 0.51
CXCL1-201ENST00000395761 TAS1R3Q7RTX0 852 aa18.25■□□□□ 0.51
CXCL1-201ENST00000395761 MYCT1Q8N699 235 aa18.25■□□□□ 0.51
CXCL1-201ENST00000395761 IQUBQ8NA54 791 aa18.25■□□□□ 0.51
CXCL1-201ENST00000395761 DDX12PQ92771 950 aa18.25■□□□□ 0.51
CXCL1-201ENST00000395761 LPPQ93052 612 aa18.25■□□□□ 0.51
CXCL1-201ENST00000395761 EIF2AQ9BY44 585 aaKnown RBP18.25■□□□□ 0.51
CXCL1-201ENST00000395761 ZHX3Q9H4I2 956 aa18.25■□□□□ 0.51
CXCL1-201ENST00000395761 PRMT7Q9NVM4 692 aaPredicted RBP18.25■□□□□ 0.51
CXCL1-201ENST00000395761 ARHGAP28Q9P2N2 729 aa18.25■□□□□ 0.51
CXCL1-201ENST00000395761 KCNH3Q9ULD8 1083 aa18.25■□□□□ 0.51
CXCL1-201ENST00000395761 PCDHB2Q9Y5E7 798 aa18.25■□□□□ 0.51
CXCL1-201ENST00000395761 TCHHQ07283 1943 aa18.25■□□□□ 0.51
CXCL1-201ENST00000395761 COL4A6Q14031 1691 aa18.25■□□□□ 0.51
CXCL1-201ENST00000395761 TMEM265A0A087WTH1 108 aa18.24■□□□□ 0.51
CXCL1-201ENST00000395761 A0A1B0GUA9 196 aa18.24■□□□□ 0.51
CXCL1-201ENST00000395761 MEIS3P2A8K0S8 358 aa18.24■□□□□ 0.51
CXCL1-201ENST00000395761 K7ERI5 159 aa18.24■□□□□ 0.51
CXCL1-201ENST00000395761 ACKR2O00590 384 aa18.24■□□□□ 0.51
CXCL1-201ENST00000395761 ZNF623O75123 536 aa18.24■□□□□ 0.51
CXCL1-201ENST00000395761 PFKFB1P16118 471 aa18.24■□□□□ 0.51
CXCL1-201ENST00000395761 NCBP1Q09161 790 aaKnown RBP18.24■□□□□ 0.51
CXCL1-201ENST00000395761 PRPF4BQ13523 1007 aaKnown RBP18.24■□□□□ 0.51
CXCL1-201ENST00000395761 PAN2Q504Q3 1202 aaKnown RBP18.24■□□□□ 0.51
CXCL1-201ENST00000395761 NT5DC1Q5TFE4 455 aa18.24■□□□□ 0.51
CXCL1-201ENST00000395761 NOTUMQ6P988 496 aa18.24■□□□□ 0.51
CXCL1-201ENST00000395761 TMEM161BQ8NDZ6 487 aa18.24■□□□□ 0.51
CXCL1-201ENST00000395761 DNAJC19Q96DA6 116 aa18.24■□□□□ 0.51
CXCL1-201ENST00000395761 PRIMPOLQ96LW4 560 aa18.24■□□□□ 0.51
CXCL1-201ENST00000395761 GBP4Q96PP9 640 aa18.24■□□□□ 0.51
CXCL1-201ENST00000395761 MTMR10Q9NXD2 777 aa18.24■□□□□ 0.51
CXCL1-201ENST00000395761 CNTNAP2Q9UHC6 1331 aa18.23■□□□□ 0.51
CXCL1-201ENST00000395761 TBKBP1A7MCY6 615 aa18.23■□□□□ 0.51
CXCL1-201ENST00000395761 TBCAO75347 108 aaKnown RBP18.23■□□□□ 0.51
CXCL1-201ENST00000395761 EOMESO95936 686 aa18.23■□□□□ 0.51
CXCL1-201ENST00000395761 SMTNP53814 917 aa18.23■□□□□ 0.51
CXCL1-201ENST00000395761 BTG3Q14201 252 aaPredicted RBP18.23■□□□□ 0.51
CXCL1-201ENST00000395761 CLLU1OSQ5K130 101 aa18.23■□□□□ 0.51
CXCL1-201ENST00000395761 MRPL10Q7Z7H8 261 aaKnown RBP18.23■□□□□ 0.51
CXCL1-201ENST00000395761 FIBCD1Q8N539 461 aa18.23■□□□□ 0.51
CXCL1-201ENST00000395761 SMG8Q8ND04 991 aaKnown RBP18.23■□□□□ 0.51
CXCL1-201ENST00000395761 GUCD1Q96NT3 240 aa18.23■□□□□ 0.51
CXCL1-201ENST00000395761 RNF39Q9H2S5 420 aa18.23■□□□□ 0.51
CXCL1-201ENST00000395761 CUEDC2Q9H467 287 aa18.23■□□□□ 0.51
CXCL1-201ENST00000395761 TMEM134Q9H6X4 195 aa18.23■□□□□ 0.51
CXCL1-201ENST00000395761 PARVGQ9HBI0 331 aa18.23■□□□□ 0.51
CXCL1-201ENST00000395761 KBTBD4Q9NVX7 518 aa18.23■□□□□ 0.51
CXCL1-201ENST00000395761 LARSQ9P2J5 1176 aaKnown RBP18.23■□□□□ 0.51
CXCL1-201ENST00000395761 MTUS1Q9ULD2 1270 aa18.23■□□□□ 0.51
CXCL1-201ENST00000395761 A0A1W2PQ27 194 aa18.22■□□□□ 0.51
CXCL1-201ENST00000395761 A0A1W2PQ64 194 aa18.22■□□□□ 0.51
CXCL1-201ENST00000395761 A0A1W2PQD8 194 aa18.22■□□□□ 0.51
CXCL1-201ENST00000395761 EPOPA6NHQ4 379 aa18.22■□□□□ 0.51
CXCL1-201ENST00000395761 LINC00271P0C7V0 271 aa18.22■□□□□ 0.51
CXCL1-201ENST00000395761 MAPTP10636 758 aaKnown RBP18.22■□□□□ 0.51
CXCL1-201ENST00000395761 RAB27AP51159 221 aa18.22■□□□□ 0.51
CXCL1-201ENST00000395761 CSPP1Q1MSJ5 1256 aa18.22■□□□□ 0.51
CXCL1-201ENST00000395761 EEF1DP3Q658K8 133 aa18.22■□□□□ 0.51
CXCL1-201ENST00000395761 TMEM87AQ8NBN3 555 aa18.22■□□□□ 0.51
CXCL1-201ENST00000395761 CCDC51Q96ER9 411 aa18.22■□□□□ 0.51
CXCL1-201ENST00000395761 CASD1Q96PB1 797 aa18.22■□□□□ 0.51
CXCL1-201ENST00000395761 C17orf80Q9BSJ5 609 aa18.22■□□□□ 0.51
CXCL1-201ENST00000395761 GOLPH3LQ9H4A5 285 aa18.22■□□□□ 0.51
CXCL1-201ENST00000395761 PRDM12Q9H4Q4 367 aa18.22■□□□□ 0.51
CXCL1-201ENST00000395761 PDZD7Q9H5P4 517 aa18.22■□□□□ 0.51
CXCL1-201ENST00000395761 RNF216Q9NWF9 866 aaPredicted RBP18.22■□□□□ 0.51
CXCL1-201ENST00000395761 SERTAD1Q9UHV2 236 aa18.22■□□□□ 0.51
CXCL1-201ENST00000395761 KCNG1Q9UIX4 513 aa18.22■□□□□ 0.51
CXCL1-201ENST00000395761 HPSEQ9Y251 543 aa18.22■□□□□ 0.51
CXCL1-201ENST00000395761 HES2Q9Y543 173 aa18.22■□□□□ 0.51
CXCL1-201ENST00000395761 IPPQ9Y573 584 aa18.22■□□□□ 0.51
CXCL1-201ENST00000395761 MRPL42Q9Y6G3 142 aaKnown RBP18.22■□□□□ 0.51
CXCL1-201ENST00000395761 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.21■□□□□ 0.51
CXCL1-201ENST00000395761 FAM237AA0A1B0GTK4 181 aa18.21■□□□□ 0.51
CXCL1-201ENST00000395761 RFXAPO00287 272 aa18.21■□□□□ 0.51
CXCL1-201ENST00000395761 TRAK2O60296 914 aa18.21■□□□□ 0.51
CXCL1-201ENST00000395761 NPTXRO95502 500 aa18.21■□□□□ 0.51
CXCL1-201ENST00000395761 SKIP12755 728 aa18.21■□□□□ 0.51
CXCL1-201ENST00000395761 NMT1P30419 496 aaKnown RBP18.21■□□□□ 0.51
CXCL1-201ENST00000395761 NDUFA8P51970 172 aa18.21■□□□□ 0.51
CXCL1-201ENST00000395761 NCKAP1LP55160 1127 aa18.21■□□□□ 0.51
CXCL1-201ENST00000395761 ERVK-21P61565 698 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms