RNA–Protein interactions for RNA: ENST00000395756.5

SREBF1-204, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 3,026 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-204ENST00000395756 GNPTABQ3T906 1256 aa19.4■□□□□ 0.7
SREBF1-204ENST00000395756 CFAP221Q4G0U5 840 aa19.4■□□□□ 0.7
SREBF1-204ENST00000395756 TAF4BQ92750 862 aa19.4■□□□□ 0.7
SREBF1-204ENST00000395756 TMEM117Q9H0C3 514 aa19.4■□□□□ 0.7
SREBF1-204ENST00000395756 UBE4BO95155 1302 aa19.4■□□□□ 0.7
SREBF1-204ENST00000395756 CEP104O60308 925 aa19.4■□□□□ 0.7
SREBF1-204ENST00000395756 PGK2P07205 417 aa19.4■□□□□ 0.7
SREBF1-204ENST00000395756 MXI1P50539 228 aa19.4■□□□□ 0.7
SREBF1-204ENST00000395756 TUBB4BP68371 445 aa19.4■□□□□ 0.7
SREBF1-204ENST00000395756 RPS6KA1Q15418 735 aa19.4■□□□□ 0.7
SREBF1-204ENST00000395756 C1orf220Q5T0J3 134 aa19.4■□□□□ 0.7
SREBF1-204ENST00000395756 CCDC70Q6NSX1 233 aa19.4■□□□□ 0.7
SREBF1-204ENST00000395756 FAM213AQ9BRX8 229 aa19.4■□□□□ 0.7
SREBF1-204ENST00000395756 PI4K2AQ9BTU6 479 aa19.4■□□□□ 0.7
SREBF1-204ENST00000395756 ADAMTS5Q9UNA0 930 aa19.4■□□□□ 0.7
SREBF1-204ENST00000395756 PFASO15067 1338 aa19.4■□□□□ 0.7
SREBF1-204ENST00000395756 STXBP2Q15833 593 aa19.39■□□□□ 0.69
SREBF1-204ENST00000395756 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.39■□□□□ 0.69
SREBF1-204ENST00000395756 HNRNPLLQ8WVV9 542 aaKnown RBP19.39■□□□□ 0.69
SREBF1-204ENST00000395756 AP1M1Q9BXS5 423 aa19.39■□□□□ 0.69
SREBF1-204ENST00000395756 FHDC1Q9C0D6 1143 aaPredicted RBP19.39■□□□□ 0.69
SREBF1-204ENST00000395756 ANKEF1Q9NU02 776 aa19.39■□□□□ 0.69
SREBF1-204ENST00000395756 GEMIN8Q9NWZ8 242 aaKnown RBP19.39■□□□□ 0.69
SREBF1-204ENST00000395756 KIF13BQ9NQT8 1826 aa19.39■□□□□ 0.69
SREBF1-204ENST00000395756 HARSP12081 509 aaKnown RBP19.39■□□□□ 0.69
SREBF1-204ENST00000395756 PRKCIP41743 596 aa19.39■□□□□ 0.69
SREBF1-204ENST00000395756 HNRNPH2P55795 449 aaKnown RBP19.39■□□□□ 0.69
SREBF1-204ENST00000395756 MEI1Q5TIA1 1274 aa19.39■□□□□ 0.69
SREBF1-204ENST00000395756 CCDC125Q86Z20 511 aa19.39■□□□□ 0.69
SREBF1-204ENST00000395756 LMO3Q8TAP4 145 aa19.39■□□□□ 0.69
SREBF1-204ENST00000395756 IFT81Q8WYA0 676 aa19.39■□□□□ 0.69
SREBF1-204ENST00000395756 RIN2Q8WYP3 895 aaPredicted RBP19.39■□□□□ 0.69
SREBF1-204ENST00000395756 ZNF668Q96K58 619 aaPredicted RBP19.39■□□□□ 0.69
SREBF1-204ENST00000395756 RPGRIP1Q96KN7 1286 aa19.39■□□□□ 0.69
SREBF1-204ENST00000395756 C12orf42Q96LP6 360 aa19.39■□□□□ 0.69
SREBF1-204ENST00000395756 KRT12Q99456 494 aa19.39■□□□□ 0.69
SREBF1-204ENST00000395756 ATAD5Q96QE3 1844 aa19.39■□□□□ 0.69
SREBF1-204ENST00000395756 ECM2O94769 699 aaPredicted RBP19.38■□□□□ 0.69
SREBF1-204ENST00000395756 GTF2A1P52655 376 aaPredicted RBP19.38■□□□□ 0.69
SREBF1-204ENST00000395756 POLGP54098 1239 aaPredicted RBP19.38■□□□□ 0.69
SREBF1-204ENST00000395756 NFIL3Q16649 462 aa19.38■□□□□ 0.69
SREBF1-204ENST00000395756 ADAT2Q7Z6V5 191 aaKnown RBP19.38■□□□□ 0.69
SREBF1-204ENST00000395756 SLC9A9Q8IVB4 645 aa19.38■□□□□ 0.69
SREBF1-204ENST00000395756 POLR3FQ9H1D9 316 aaPredicted RBP19.38■□□□□ 0.69
SREBF1-204ENST00000395756 XPNPEP1Q9NQW7 623 aa19.38■□□□□ 0.69
SREBF1-204ENST00000395756 CYP26B1Q9NR63 512 aa19.38■□□□□ 0.69
SREBF1-204ENST00000395756 PCDHGC5Q9Y5F6 944 aa19.38■□□□□ 0.69
SREBF1-204ENST00000395756 MAP2K7O14733 419 aa19.38■□□□□ 0.69
SREBF1-204ENST00000395756 MARK3P27448 753 aa19.38■□□□□ 0.69
SREBF1-204ENST00000395756 C8orf74Q6P047 294 aa19.38■□□□□ 0.69
SREBF1-204ENST00000395756 WDR93Q6P2C0 686 aa19.38■□□□□ 0.69
SREBF1-204ENST00000395756 PEX26Q7Z412 305 aa19.38■□□□□ 0.69
SREBF1-204ENST00000395756 SEMA4DQ92854 862 aa19.38■□□□□ 0.69
SREBF1-204ENST00000395756 TMEM110-MUSTN1A8MSY1 372 aa19.38■□□□□ 0.69
SREBF1-204ENST00000395756 NCKAP1LP55160 1127 aa19.38■□□□□ 0.69
SREBF1-204ENST00000395756 SEZ6Q53EL9 994 aa19.38■□□□□ 0.69
SREBF1-204ENST00000395756 THAP2Q9H0W7 228 aa19.38■□□□□ 0.69
SREBF1-204ENST00000395756 VPS18Q9P253 973 aa19.38■□□□□ 0.69
SREBF1-204ENST00000395756 PRLRP16471 622 aa19.37■□□□□ 0.69
SREBF1-204ENST00000395756 PRPF4BQ13523 1007 aaKnown RBP19.37■□□□□ 0.69
SREBF1-204ENST00000395756 SLC35G2Q8TBE7 412 aa19.37■□□□□ 0.69
SREBF1-204ENST00000395756 ARHGEF26Q96DR7 871 aa19.37■□□□□ 0.69
SREBF1-204ENST00000395756 PNMA2Q9UL42 364 aa19.37■□□□□ 0.69
SREBF1-204ENST00000395756 IGSF9BQ9UPX0 1349 aa19.37■□□□□ 0.69
SREBF1-204ENST00000395756 LRRIQ4A6NIV6 560 aa19.37■□□□□ 0.69
SREBF1-204ENST00000395756 CYP26A1O43174 497 aa19.37■□□□□ 0.69
SREBF1-204ENST00000395756 ATP8B1O43520 1251 aa19.37■□□□□ 0.69
SREBF1-204ENST00000395756 ACOT2P49753 483 aa19.37■□□□□ 0.69
SREBF1-204ENST00000395756 OAZ1P54368 228 aa19.37■□□□□ 0.69
SREBF1-204ENST00000395756 TRADDQ15628 312 aa19.37■□□□□ 0.69
SREBF1-204ENST00000395756 NAA35Q5VZE5 725 aa19.37■□□□□ 0.69
SREBF1-204ENST00000395756 MIS18BP1Q6P0N0 1132 aa19.37■□□□□ 0.69
SREBF1-204ENST00000395756 SLC39A4Q6P5W5 647 aa19.37■□□□□ 0.69
SREBF1-204ENST00000395756 ABHD15Q6UXT9 468 aa19.37■□□□□ 0.69
SREBF1-204ENST00000395756 CCNI2Q6ZMN8 369 aaPredicted RBP19.37■□□□□ 0.69
SREBF1-204ENST00000395756 TPCN2Q8NHX9 752 aa19.37■□□□□ 0.69
SREBF1-204ENST00000395756 DHX38Q92620 1227 aaKnown RBP19.37■□□□□ 0.69
SREBF1-204ENST00000395756 FBXL5Q9UKA1 691 aa19.37■□□□□ 0.69
SREBF1-204ENST00000395756 SSC5DA1L4H1 1573 aa19.37■□□□□ 0.69
SREBF1-204ENST00000395756 MYH11P35749 1972 aa19.37■□□□□ 0.69
SREBF1-204ENST00000395756 SPATA31C2B4DYI2 1134 aa19.36■□□□□ 0.69
SREBF1-204ENST00000395756 EPC2Q52LR7 807 aa19.36■□□□□ 0.69
SREBF1-204ENST00000395756 TAS1R2Q8TE23 839 aa19.36■□□□□ 0.69
SREBF1-204ENST00000395756 TSPYL1Q9H0U9 437 aa19.36■□□□□ 0.69
SREBF1-204ENST00000395756 EXOC7Q9UPT5 735 aa19.36■□□□□ 0.69
SREBF1-204ENST00000395756 MAFGO15525 162 aa19.36■□□□□ 0.69
SREBF1-204ENST00000395756 STBD1O95210 358 aa19.36■□□□□ 0.69
SREBF1-204ENST00000395756 SGPL1O95470 568 aa19.36■□□□□ 0.69
SREBF1-204ENST00000395756 ATP4AP20648 1035 aa19.36■□□□□ 0.69
SREBF1-204ENST00000395756 LY6KQ17RY6 165 aa19.36■□□□□ 0.69
SREBF1-204ENST00000395756 SND1Q7KZF4 910 aaKnown RBP eCLIP19.36■□□□□ 0.693e-7■■■□□ 15.8
SREBF1-204ENST00000395756 GPATCH11Q8N954 259 aa19.36■□□□□ 0.69
SREBF1-204ENST00000395756 CTNNBL1Q8WYA6 563 aaPredicted RBP19.36■□□□□ 0.69
SREBF1-204ENST00000395756 ZBTB45Q96K62 511 aaPredicted RBP19.36■□□□□ 0.69
SREBF1-204ENST00000395756 IFT74Q96LB3 600 aa19.36■□□□□ 0.69
SREBF1-204ENST00000395756 ZNF302Q9NR11 478 aa19.36■□□□□ 0.69
SREBF1-204ENST00000395756 ATMINO43313 823 aaPredicted RBP19.35■□□□□ 0.69
SREBF1-204ENST00000395756 ALCAMQ13740 583 aa19.35■□□□□ 0.69
SREBF1-204ENST00000395756 RPUSD2Q8IZ73 545 aaKnown RBP19.35■□□□□ 0.69
SREBF1-204ENST00000395756 ANKFY1Q9P2R3 1169 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms