RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 USP34Q70CQ2 3546 aa19.54■□□□□ 0.72
SNRPA1-202ENST00000394082 INPPL1O15357 1258 aa19.53■□□□□ 0.72
SNRPA1-202ENST00000394082 BAG4O95429 457 aaKnown RBP19.53■□□□□ 0.72
SNRPA1-202ENST00000394082 ALDH2P05091 517 aa19.53■□□□□ 0.72
SNRPA1-202ENST00000394082 NCLP19338 710 aaKnown RBP19.53■□□□□ 0.72
SNRPA1-202ENST00000394082 AXLP30530 894 aa19.53■□□□□ 0.72
SNRPA1-202ENST00000394082 SLC11A1P49279 550 aa19.53■□□□□ 0.72
SNRPA1-202ENST00000394082 MXD4Q14582 209 aaPredicted RBP19.53■□□□□ 0.72
SNRPA1-202ENST00000394082 ANKRD1Q15327 319 aa19.53■□□□□ 0.72
SNRPA1-202ENST00000394082 PTPN14Q15678 1187 aa19.53■□□□□ 0.72
SNRPA1-202ENST00000394082 PIK3AP1Q6ZUJ8 805 aa19.53■□□□□ 0.72
SNRPA1-202ENST00000394082 FERMT3Q86UX7 667 aa19.53■□□□□ 0.72
SNRPA1-202ENST00000394082 IFNLR1Q8IU57 520 aaPredicted RBP19.53■□□□□ 0.72
SNRPA1-202ENST00000394082 ZNF579Q8NAF0 562 aaKnown RBP19.53■□□□□ 0.72
SNRPA1-202ENST00000394082 KREMEN2Q8NCW0 462 aa19.53■□□□□ 0.72
SNRPA1-202ENST00000394082 BCL7CQ8WUZ0 217 aaPredicted RBP19.53■□□□□ 0.72
SNRPA1-202ENST00000394082 CCDC51Q96ER9 411 aa19.53■□□□□ 0.72
SNRPA1-202ENST00000394082 RSAD1Q9HA92 442 aa19.53■□□□□ 0.72
SNRPA1-202ENST00000394082 DNAJB4Q9UDY4 337 aa19.53■□□□□ 0.72
SNRPA1-202ENST00000394082 INPP5FQ9Y2H2 1132 aa19.53■□□□□ 0.72
SNRPA1-202ENST00000394082 C2CD4DB7Z1M9 353 aa19.52■□□□□ 0.72
SNRPA1-202ENST00000394082 LYPLA2O95372 231 aa19.52■□□□□ 0.72
SNRPA1-202ENST00000394082 AVPR2P30518 371 aa19.52■□□□□ 0.72
SNRPA1-202ENST00000394082 TCF15Q12870 199 aa19.52■□□□□ 0.72
SNRPA1-202ENST00000394082 EMC2Q15006 297 aa19.52■□□□□ 0.72
SNRPA1-202ENST00000394082 UBXN11Q5T124 520 aa19.52■□□□□ 0.72
SNRPA1-202ENST00000394082 ZBTB33Q86T24 672 aa19.52■□□□□ 0.72
SNRPA1-202ENST00000394082 ZNF280BQ86YH2 543 aa19.52■□□□□ 0.72
SNRPA1-202ENST00000394082 TMEM143Q96AN5 459 aa19.52■□□□□ 0.72
SNRPA1-202ENST00000394082 VN1R3Q9BXE9 311 aa19.52■□□□□ 0.72
SNRPA1-202ENST00000394082 EMILIN2Q9BXX0 1053 aa19.52■□□□□ 0.72
SNRPA1-202ENST00000394082 MINDY3Q9H8M7 445 aa19.52■□□□□ 0.72
SNRPA1-202ENST00000394082 TPCN1Q9ULQ1 816 aa19.52■□□□□ 0.72
SNRPA1-202ENST00000394082 MARCH6O60337 910 aa19.51■□□□□ 0.71
SNRPA1-202ENST00000394082 LILRB3O75022 631 aa19.51■□□□□ 0.71
SNRPA1-202ENST00000394082 DDHD2O94830 711 aa19.51■□□□□ 0.71
SNRPA1-202ENST00000394082 SRGAP2CP0DJJ0 459 aa19.51■□□□□ 0.71
SNRPA1-202ENST00000394082 LONRF3Q496Y0 759 aa19.51■□□□□ 0.71
SNRPA1-202ENST00000394082 POTEDQ86YR6 584 aa19.51■□□□□ 0.71
SNRPA1-202ENST00000394082 RNF149Q8NC42 400 aa19.51■□□□□ 0.71
SNRPA1-202ENST00000394082 OXER1Q8TDS5 423 aa19.51■□□□□ 0.71
SNRPA1-202ENST00000394082 TNFRSF25Q93038 417 aa19.51■□□□□ 0.71
SNRPA1-202ENST00000394082 MTRQ99707 1265 aa19.51■□□□□ 0.71
SNRPA1-202ENST00000394082 NFKBIZQ9BYH8 718 aa19.51■□□□□ 0.71
SNRPA1-202ENST00000394082 SFXN1Q9H9B4 322 aa19.51■□□□□ 0.71
SNRPA1-202ENST00000394082 TSHZ2Q9NRE2 1034 aa19.51■□□□□ 0.71
SNRPA1-202ENST00000394082 RGL1Q9NZL6 768 aa19.51■□□□□ 0.71
SNRPA1-202ENST00000394082 ORC3Q9UBD5 711 aaPredicted RBP19.51■□□□□ 0.71
SNRPA1-202ENST00000394082 SSX2IPQ9Y2D8 614 aa19.51■□□□□ 0.71
SNRPA1-202ENST00000394082 B4GALT3O60512 393 aa19.5■□□□□ 0.71
SNRPA1-202ENST00000394082 SLITRK3O94933 977 aa19.5■□□□□ 0.71
SNRPA1-202ENST00000394082 CTDNEP1O95476 244 aa19.5■□□□□ 0.71
SNRPA1-202ENST00000394082 C1RP00736 705 aa19.5■□□□□ 0.71
SNRPA1-202ENST00000394082 EPCAMP16422 314 aa19.5■□□□□ 0.71
SNRPA1-202ENST00000394082 CA8P35219 290 aa19.5■□□□□ 0.71
SNRPA1-202ENST00000394082 PTENP60484 403 aa19.5■□□□□ 0.71
SNRPA1-202ENST00000394082 NCBP1Q09161 790 aaKnown RBP19.5■□□□□ 0.71
SNRPA1-202ENST00000394082 XKR9Q5GH70 373 aa19.5■□□□□ 0.71
SNRPA1-202ENST00000394082 RARS2Q5T160 578 aaKnown RBP19.5■□□□□ 0.71
SNRPA1-202ENST00000394082 C15orf39Q6ZRI6 1047 aa19.5■□□□□ 0.71
SNRPA1-202ENST00000394082 GPR149Q86SP6 731 aa19.5■□□□□ 0.71
SNRPA1-202ENST00000394082 CABP7Q86V35 215 aa19.5■□□□□ 0.71
SNRPA1-202ENST00000394082 TDRD5Q8NAT2 981 aaKnown RBP19.5■□□□□ 0.71
SNRPA1-202ENST00000394082 AUTS2Q8WXX7 1259 aa19.5■□□□□ 0.71
SNRPA1-202ENST00000394082 DYDC2Q96IM9 177 aa19.5■□□□□ 0.71
SNRPA1-202ENST00000394082 FAM193BQ96PV7 902 aaPredicted RBP19.5■□□□□ 0.71
SNRPA1-202ENST00000394082 HSD17B14Q9BPX1 270 aa19.5■□□□□ 0.71
SNRPA1-202ENST00000394082 RHOBTB2Q9BYZ6 727 aa19.5■□□□□ 0.71
SNRPA1-202ENST00000394082 BRMS1Q9HCU9 246 aa19.5■□□□□ 0.71
SNRPA1-202ENST00000394082 CDH22Q9UJ99 828 aa19.5■□□□□ 0.71
SNRPA1-202ENST00000394082 FAN1Q9Y2M0 1017 aa19.5■□□□□ 0.71
SNRPA1-202ENST00000394082 NRP1O14786 923 aa19.49■□□□□ 0.71
SNRPA1-202ENST00000394082 ERLIN2O94905 339 aa19.49■□□□□ 0.71
SNRPA1-202ENST00000394082 EFEMP2O95967 443 aa19.49■□□□□ 0.71
SNRPA1-202ENST00000394082 KRT2P35908 639 aa19.49■□□□□ 0.71
SNRPA1-202ENST00000394082 CLCN4P51793 760 aa19.49■□□□□ 0.71
SNRPA1-202ENST00000394082 VCPP55072 806 aaKnown RBP19.49■□□□□ 0.71
SNRPA1-202ENST00000394082 TFDP1Q14186 410 aa19.49■□□□□ 0.71
SNRPA1-202ENST00000394082 NCAPH2Q6IBW4 605 aa19.49■□□□□ 0.71
SNRPA1-202ENST00000394082 NOTUMQ6P988 496 aa19.49■□□□□ 0.71
SNRPA1-202ENST00000394082 CYP26C1Q6V0L0 522 aa19.49■□□□□ 0.71
SNRPA1-202ENST00000394082 SMG8Q8ND04 991 aaKnown RBP19.49■□□□□ 0.71
SNRPA1-202ENST00000394082 KLHL5Q96PQ7 755 aa19.49■□□□□ 0.71
SNRPA1-202ENST00000394082 GBP3Q9H0R5 595 aa19.49■□□□□ 0.71
SNRPA1-202ENST00000394082 MRPL17Q9NRX2 175 aaKnown RBP19.49■□□□□ 0.71
SNRPA1-202ENST00000394082 GJB4Q9NTQ9 266 aa19.49■□□□□ 0.71
SNRPA1-202ENST00000394082 ANKEF1Q9NU02 776 aa19.49■□□□□ 0.71
SNRPA1-202ENST00000394082 DBR1Q9UK59 544 aaKnown RBP19.49■□□□□ 0.71
SNRPA1-202ENST00000394082 PCDHA12Q9UN75 941 aa19.49■□□□□ 0.71
SNRPA1-202ENST00000394082 ARID2Q68CP9 1835 aa19.48■□□□□ 0.71
SNRPA1-202ENST00000394082 DENND4AQ7Z401 1863 aa19.48■□□□□ 0.71
SNRPA1-202ENST00000394082 ZMYM2Q9UBW7 1377 aa19.48■□□□□ 0.71
SNRPA1-202ENST00000394082 TSPAN1O60635 241 aa19.48■□□□□ 0.71
SNRPA1-202ENST00000394082 DGAT1O75907 488 aa19.48■□□□□ 0.71
SNRPA1-202ENST00000394082 BRD1O95696 1058 aa19.48■□□□□ 0.71
SNRPA1-202ENST00000394082 SOD2P04179 222 aa19.48■□□□□ 0.71
SNRPA1-202ENST00000394082 CNPP09543 421 aaKnown RBP19.48■□□□□ 0.71
SNRPA1-202ENST00000394082 XRCC6P12956 609 aaKnown RBP eCLIP19.48■□□□□ 0.71
SNRPA1-202ENST00000394082 FDPSP14324 419 aaKnown RBP19.48■□□□□ 0.71
SNRPA1-202ENST00000394082 SP100P23497 879 aaPredicted RBP19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms