RNA–Protein interactions for RNA: ENST00000393120.6

MKS1-203, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 1,926 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-203ENST00000393120 CYP26B1Q9NR63 512 aa15.5■□□□□ 0.07
MKS1-203ENST00000393120 STIM2Q9P246 746 aa15.5■□□□□ 0.07
MKS1-203ENST00000393120 FBXO40Q9UH90 709 aa15.5■□□□□ 0.07
MKS1-203ENST00000393120 TMEM59LQ9UK28 342 aa15.5■□□□□ 0.07
MKS1-203ENST00000393120 COL11A1P12107 1806 aaPredicted RBP15.5■□□□□ 0.07
MKS1-203ENST00000393120 IGSF9BQ9UPX0 1349 aa15.49■□□□□ 0.07
MKS1-203ENST00000393120 H3BQF6 201 aa15.49■□□□□ 0.07
MKS1-203ENST00000393120 ADRB2P07550 413 aa15.49■□□□□ 0.07
MKS1-203ENST00000393120 SUPT20HL2P0C7V6 817 aa15.49■□□□□ 0.07
MKS1-203ENST00000393120 ZBTB48P10074 688 aaPredicted RBP15.49■□□□□ 0.07
MKS1-203ENST00000393120 GARTP22102 1010 aa15.49■□□□□ 0.07
MKS1-203ENST00000393120 MXI1P50539 228 aa15.49■□□□□ 0.07
MKS1-203ENST00000393120 VGLL4Q14135 290 aa15.49■□□□□ 0.07
MKS1-203ENST00000393120 TCEAL1Q15170 157 aa15.49■□□□□ 0.07
MKS1-203ENST00000393120 CCDC60Q8IWA6 550 aaPredicted RBP15.49■□□□□ 0.07
MKS1-203ENST00000393120 ACTRT1Q8TDG2 376 aa15.49■□□□□ 0.07
MKS1-203ENST00000393120 PARD3BQ8TEW8 1205 aa15.49■□□□□ 0.07
MKS1-203ENST00000393120 RFFLQ8WZ73 363 aa15.49■□□□□ 0.07
MKS1-203ENST00000393120 AGPAT1Q99943 283 aa15.49■□□□□ 0.07
MKS1-203ENST00000393120 ATP6V0A4Q9HBG4 840 aa15.49■□□□□ 0.07
MKS1-203ENST00000393120 MED4Q9NPJ6 270 aa15.49■□□□□ 0.07
MKS1-203ENST00000393120 XPNPEP1Q9NQW7 623 aa15.49■□□□□ 0.07
MKS1-203ENST00000393120 SMARCAL1Q9NZC9 954 aa15.49■□□□□ 0.07
MKS1-203ENST00000393120 DMGDHQ9UI17 866 aaKnown RBP15.49■□□□□ 0.07
MKS1-203ENST00000393120 ZMYND10O75800 440 aa15.49■□□□□ 0.07
MKS1-203ENST00000393120 PRKCEQ02156 737 aa15.49■□□□□ 0.07
MKS1-203ENST00000393120 ARHGAP44Q17R89 818 aa15.49■□□□□ 0.07
MKS1-203ENST00000393120 KRT39Q6A163 491 aa15.49■□□□□ 0.07
MKS1-203ENST00000393120 C8orf74Q6P047 294 aa15.49■□□□□ 0.07
MKS1-203ENST00000393120 USP37Q86T82 979 aa15.49■□□□□ 0.07
MKS1-203ENST00000393120 RIOX2Q8IUF8 465 aa15.49■□□□□ 0.07
MKS1-203ENST00000393120 USP38Q8NB14 1042 aa15.49■□□□□ 0.07
MKS1-203ENST00000393120 ZSWIM2Q8NEG5 633 aa15.49■□□□□ 0.07
MKS1-203ENST00000393120 HDAC7Q8WUI4 952 aa15.49■□□□□ 0.07
MKS1-203ENST00000393120 SELENOOQ9BVL4 669 aa15.49■□□□□ 0.07
MKS1-203ENST00000393120 EHD2Q9NZN4 543 aa15.49■□□□□ 0.07
MKS1-203ENST00000393120 MAFBQ9Y5Q3 323 aaPredicted RBP15.49■□□□□ 0.07
MKS1-203ENST00000393120 ANKRD62A6NC57 917 aa15.48■□□□□ 0.07
MKS1-203ENST00000393120 POLR3GO15318 223 aaPredicted RBP15.48■□□□□ 0.07
MKS1-203ENST00000393120 MYBL2P10244 700 aa15.48■□□□□ 0.07
MKS1-203ENST00000393120 MATR3P43243 847 aaKnown RBP eCLIP15.48■□□□□ 0.07
MKS1-203ENST00000393120 HADHBP55084 474 aaKnown RBP15.48■□□□□ 0.07
MKS1-203ENST00000393120 SLC39A4Q6P5W5 647 aa15.48■□□□□ 0.07
MKS1-203ENST00000393120 CBWD2Q8IUF1 395 aa15.48■□□□□ 0.07
MKS1-203ENST00000393120 ARHGEF19Q8IW93 802 aa15.48■□□□□ 0.07
MKS1-203ENST00000393120 FAM71AQ8IYT1 594 aa15.48■□□□□ 0.07
MKS1-203ENST00000393120 CTNNBL1Q8WYA6 563 aaPredicted RBP15.48■□□□□ 0.07
MKS1-203ENST00000393120 IFT74Q96LB3 600 aa15.48■□□□□ 0.07
MKS1-203ENST00000393120 TMEM8AQ9HCN3 771 aa15.48■□□□□ 0.07
MKS1-203ENST00000393120 ZCCHC17Q9NP64 241 aaKnown RBP15.48■□□□□ 0.07
MKS1-203ENST00000393120 ARHGAP28Q9P2N2 729 aa15.48■□□□□ 0.07
MKS1-203ENST00000393120 PACSIN2Q9UNF0 486 aaPredicted RBP15.48■□□□□ 0.07
MKS1-203ENST00000393120 GOLGB1Q14789 3259 aaKnown RBP15.48■□□□□ 0.07
MKS1-203ENST00000393120 GPC3P51654 580 aa15.47■□□□□ 0.07
MKS1-203ENST00000393120 SP2Q02086 613 aa15.47■□□□□ 0.07
MKS1-203ENST00000393120 PPATQ06203 517 aa15.47■□□□□ 0.07
MKS1-203ENST00000393120 TRMT1LQ7Z2T5 733 aaKnown RBP15.47■□□□□ 0.07
MKS1-203ENST00000393120 PEX26Q7Z412 305 aa15.47■□□□□ 0.07
MKS1-203ENST00000393120 NT5DC3Q86UY8 548 aa15.47■□□□□ 0.07
MKS1-203ENST00000393120 SLC35G2Q8TBE7 412 aa15.47■□□□□ 0.07
MKS1-203ENST00000393120 FAM71BQ8TC56 605 aa15.47■□□□□ 0.07
MKS1-203ENST00000393120 HES6Q96HZ4 224 aa15.47■□□□□ 0.07
MKS1-203ENST00000393120 KIFC3Q9BVG8 833 aa15.47■□□□□ 0.07
MKS1-203ENST00000393120 ISCUQ9H1K1 167 aa15.47■□□□□ 0.07
MKS1-203ENST00000393120 HPCAL4Q9UM19 191 aa15.47■□□□□ 0.07
MKS1-203ENST00000393120 LOC285556D6RIA3 1793 aa15.47■□□□□ 0.07
MKS1-203ENST00000393120 IGKV6D-21A0A0A0MT36 114 aa15.47■□□□□ 0.07
MKS1-203ENST00000393120 GOLGA8IPA6NC78 632 aa15.47■□□□□ 0.07
MKS1-203ENST00000393120 GOLGA8JA6NMD2 632 aa15.47■□□□□ 0.07
MKS1-203ENST00000393120 KCNK3O14649 394 aa15.47■□□□□ 0.07
MKS1-203ENST00000393120 CLSTN1O94985 981 aa15.47■□□□□ 0.07
MKS1-203ENST00000393120 MFAP3P55082 362 aa15.47■□□□□ 0.07
MKS1-203ENST00000393120 EMBQ6PCB8 327 aa15.47■□□□□ 0.07
MKS1-203ENST00000393120 DNAAF5Q86Y56 855 aa15.47■□□□□ 0.07
MKS1-203ENST00000393120 IFT20Q8IY31 132 aa15.47■□□□□ 0.07
MKS1-203ENST00000393120 ANKRD35Q8N283 1001 aa15.47■□□□□ 0.07
MKS1-203ENST00000393120 RASGEF1CQ8N431 466 aa15.47■□□□□ 0.07
MKS1-203ENST00000393120 SCFD2Q8WU76 684 aa15.47■□□□□ 0.07
MKS1-203ENST00000393120 NIFKQ9BYG3 293 aaKnown RBP15.47■□□□□ 0.07
MKS1-203ENST00000393120 KIAA1586Q9HCI6 787 aa15.47■□□□□ 0.07
MKS1-203ENST00000393120 GDF3Q9NR23 364 aa15.47■□□□□ 0.07
MKS1-203ENST00000393120 ADARB2Q9NS39 739 aaKnown RBP15.47■□□□□ 0.07
MKS1-203ENST00000393120 SEPT9Q9UHD8 586 aaPredicted RBP15.47■□□□□ 0.07
MKS1-203ENST00000393120 DIS3Q9Y2L1 958 aaKnown RBP15.47■□□□□ 0.07
MKS1-203ENST00000393120 TELO2Q9Y4R8 837 aa15.47■□□□□ 0.07
MKS1-203ENST00000393120 SYNGAP1Q96PV0 1343 aa15.46■□□□□ 0.07
MKS1-203ENST00000393120 KIAA0391O15091 583 aaKnown RBP15.46■□□□□ 0.07
MKS1-203ENST00000393120 EDNRBP24530 442 aa15.46■□□□□ 0.07
MKS1-203ENST00000393120 TNNC1P63316 161 aa15.46■□□□□ 0.07
MKS1-203ENST00000393120 CYP24A1Q07973 514 aa15.46■□□□□ 0.07
MKS1-203ENST00000393120 HSP90B2PQ58FF3 399 aa15.46■□□□□ 0.07
MKS1-203ENST00000393120 TREML2Q5T2D2 321 aa15.46■□□□□ 0.07
MKS1-203ENST00000393120 DAAM2Q86T65 1068 aa15.46■□□□□ 0.07
MKS1-203ENST00000393120 RHOT2Q8IXI1 618 aa15.46■□□□□ 0.07
MKS1-203ENST00000393120 GPD1LQ8N335 351 aa15.46■□□□□ 0.07
MKS1-203ENST00000393120 EIF1ADQ8N9N8 165 aaKnown RBP15.46■□□□□ 0.07
MKS1-203ENST00000393120 SHC3Q92529 594 aa15.46■□□□□ 0.07
MKS1-203ENST00000393120 SAAL1Q96ER3 474 aa15.46■□□□□ 0.07
MKS1-203ENST00000393120 POLR3FQ9H1D9 316 aaPredicted RBP15.46■□□□□ 0.07
MKS1-203ENST00000393120 ZNF302Q9NR11 478 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 647.8 ms