RNA–Protein interactions for RNA: ENST00000393043.5

CLTC-202, Transcript of clathrin heavy chain, humanhuman

TSL 1 (best) BASIC

Gene CLTC, Length 5,292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-202ENST00000393043 ZNF18P17022 549 aa13.5□□□□□ -0.25
CLTC-202ENST00000393043 DHX34Q14147 1143 aaKnown RBP13.5□□□□□ -0.25
CLTC-202ENST00000393043 SH2D4BQ5SQS7 431 aa13.5□□□□□ -0.25
CLTC-202ENST00000393043 PASD1Q8IV76 773 aa13.5□□□□□ -0.25
CLTC-202ENST00000393043 CFAP61Q8NHU2 1237 aa13.5□□□□□ -0.25
CLTC-202ENST00000393043 DNAJC5Q9H3Z4 198 aa13.5□□□□□ -0.25
CLTC-202ENST00000393043 TLK1Q9UKI8 766 aa13.5□□□□□ -0.25
CLTC-202ENST00000393043 GPC4O75487 556 aa13.5□□□□□ -0.25
CLTC-202ENST00000393043 CA4P22748 312 aa13.5□□□□□ -0.25
CLTC-202ENST00000393043 CERKQ8TCT0 537 aa13.5□□□□□ -0.25
CLTC-202ENST00000393043 SPATA33Q96N06 139 aa13.5□□□□□ -0.25
CLTC-202ENST00000393043 DDX56Q9NY93 547 aaKnown RBP13.5□□□□□ -0.25
CLTC-202ENST00000393043 HSPBP1Q9NZL4 362 aa13.5□□□□□ -0.25
CLTC-202ENST00000393043 NOC2LQ9Y3T9 749 aaKnown RBP13.5□□□□□ -0.25
CLTC-202ENST00000393043 PPP1R3GB7ZBB8 358 aa13.49□□□□□ -0.25
CLTC-202ENST00000393043 PLS3P13797 630 aa13.49□□□□□ -0.25
CLTC-202ENST00000393043 SAYSD1Q9NPB0 183 aa13.49□□□□□ -0.25
CLTC-202ENST00000393043 CPSF3Q9UKF6 684 aaKnown RBP13.49□□□□□ -0.25
CLTC-202ENST00000393043 HPSEQ9Y251 543 aa13.49□□□□□ -0.25
CLTC-202ENST00000393043 HUS1O60921 280 aa13.49□□□□□ -0.25
CLTC-202ENST00000393043 KRT37O76014 449 aa13.49□□□□□ -0.25
CLTC-202ENST00000393043 FMO5P49326 533 aa13.49□□□□□ -0.25
CLTC-202ENST00000393043 MRPS25P82663 173 aaKnown RBP13.49□□□□□ -0.25
CLTC-202ENST00000393043 CDO1Q16878 200 aa13.49□□□□□ -0.25
CLTC-202ENST00000393043 MICALL2Q8IY33 904 aa13.49□□□□□ -0.25
CLTC-202ENST00000393043 ZNF280CQ8ND82 737 aa13.49□□□□□ -0.25
CLTC-202ENST00000393043 DDX47Q9H0S4 455 aaKnown RBP13.49□□□□□ -0.25
CLTC-202ENST00000393043 UCHL3P15374 230 aa13.49□□□□□ -0.25
CLTC-202ENST00000393043 STAT5BP51692 787 aa13.49□□□□□ -0.25
CLTC-202ENST00000393043 ADCY1Q08828 1119 aa13.49□□□□□ -0.25
CLTC-202ENST00000393043 RAB44Q7Z6P3 723 aaPredicted RBP13.49□□□□□ -0.25
CLTC-202ENST00000393043 OTUD5Q96G74 571 aa13.49□□□□□ -0.25
CLTC-202ENST00000393043 CYP26B1Q9NR63 512 aa13.49□□□□□ -0.25
CLTC-202ENST00000393043 TXLNGQ9NUQ3 528 aa13.49□□□□□ -0.25
CLTC-202ENST00000393043 USH1CQ9Y6N9 552 aa13.49□□□□□ -0.25
CLTC-202ENST00000393043 TXNDC9O14530 226 aa13.49□□□□□ -0.25
CLTC-202ENST00000393043 GGCXP38435 758 aa13.49□□□□□ -0.25
CLTC-202ENST00000393043 SLC1A1P43005 524 aa13.49□□□□□ -0.25
CLTC-202ENST00000393043 PLCB4Q15147 1175 aa13.49□□□□□ -0.25
CLTC-202ENST00000393043 SEC23AQ15436 765 aa13.49□□□□□ -0.25
CLTC-202ENST00000393043 ZNF746Q6NUN9 644 aaPredicted RBP13.49□□□□□ -0.25
CLTC-202ENST00000393043 FAF2Q96CS3 445 aa13.49□□□□□ -0.25
CLTC-202ENST00000393043 POLR3CQ9BUI4 534 aaPredicted RBP13.49□□□□□ -0.25
CLTC-202ENST00000393043 CASQ2O14958 399 aaPredicted RBP13.48□□□□□ -0.25
CLTC-202ENST00000393043 PMS2P54278 862 aa13.48□□□□□ -0.25
CLTC-202ENST00000393043 THOC5Q13769 683 aaKnown RBP13.48□□□□□ -0.25
CLTC-202ENST00000393043 BAATQ14032 418 aaPredicted RBP13.48□□□□□ -0.25
CLTC-202ENST00000393043 MOXD1Q6UVY6 613 aa13.48□□□□□ -0.25
CLTC-202ENST00000393043 MXRA8Q9BRK3 442 aa13.48□□□□□ -0.25
CLTC-202ENST00000393043 HEMGNQ9BXL5 484 aa13.48□□□□□ -0.25
CLTC-202ENST00000393043 CNOT7Q9UIV1 285 aaKnown RBP13.48□□□□□ -0.25
CLTC-202ENST00000393043 MYL3P08590 195 aa13.48□□□□□ -0.25
CLTC-202ENST00000393043 KLRK1P26718 216 aa13.48□□□□□ -0.25
CLTC-202ENST00000393043 SDC4P31431 198 aa13.48□□□□□ -0.25
CLTC-202ENST00000393043 KLHL29Q96CT2 875 aa13.48□□□□□ -0.25
CLTC-202ENST00000393043 ERGIC2Q96RQ1 377 aa13.48□□□□□ -0.25
CLTC-202ENST00000393043 MKRN3Q13064 507 aaKnown RBP13.48□□□□□ -0.25
CLTC-202ENST00000393043 COG1Q8WTW3 980 aa13.48□□□□□ -0.25
CLTC-202ENST00000393043 TACO1Q9BSH4 297 aaKnown RBP13.48□□□□□ -0.25
CLTC-202ENST00000393043 AGPAT5Q9NUQ2 364 aa13.48□□□□□ -0.25
CLTC-202ENST00000393043 PARVAQ9NVD7 372 aa13.48□□□□□ -0.25
CLTC-202ENST00000393043 UVRAGQ9P2Y5 699 aa13.48□□□□□ -0.25
CLTC-202ENST00000393043 MORC2Q9Y6X9 1032 aaPredicted RBP13.48□□□□□ -0.25
CLTC-202ENST00000393043 GYPCP04921 128 aa13.48□□□□□ -0.25
CLTC-202ENST00000393043 NR3C2P08235 984 aa13.48□□□□□ -0.25
CLTC-202ENST00000393043 GRIN1Q05586 938 aa13.48□□□□□ -0.25
CLTC-202ENST00000393043 NFX1Q12986 1120 aaKnown RBP13.48□□□□□ -0.25
CLTC-202ENST00000393043 ZNF211Q13398 564 aaPredicted RBP13.48□□□□□ -0.25
CLTC-202ENST00000393043 GBP7Q8N8V2 638 aaPredicted RBP13.48□□□□□ -0.25
CLTC-202ENST00000393043 SYN2Q92777 582 aaPredicted RBP13.48□□□□□ -0.25
CLTC-202ENST00000393043 GCOM2Q9BZD3 368 aaPredicted RBP13.48□□□□□ -0.25
CLTC-202ENST00000393043 RPS12P25398 132 aaKnown RBP13.48□□□□□ -0.25
CLTC-202ENST00000393043 PSMC1P62191 440 aaKnown RBP13.48□□□□□ -0.25
CLTC-202ENST00000393043 SPARCL1Q14515 664 aa13.48□□□□□ -0.25
CLTC-202ENST00000393043 ATG16L1Q676U5 607 aa13.48□□□□□ -0.25
CLTC-202ENST00000393043 TRIM56Q9BRZ2 755 aaKnown RBP13.48□□□□□ -0.25
CLTC-202ENST00000393043 FOXP2O15409 715 aa13.47□□□□□ -0.25
CLTC-202ENST00000393043 P4HA2O15460 535 aa13.47□□□□□ -0.25
CLTC-202ENST00000393043 PPP6R3Q5H9R7 873 aaPredicted RBP13.47□□□□□ -0.25
CLTC-202ENST00000393043 RAD9BQ6WBX8 426 aa13.47□□□□□ -0.25
CLTC-202ENST00000393043 PLCD3Q8N3E9 789 aa13.47□□□□□ -0.25
CLTC-202ENST00000393043 AGBL3Q8NEM8 1001 aa13.47□□□□□ -0.25
CLTC-202ENST00000393043 CFAP36Q96G28 342 aa13.47□□□□□ -0.25
CLTC-202ENST00000393043 RNF181Q9P0P0 153 aa13.47□□□□□ -0.25
CLTC-202ENST00000393043 SCP2P22307 547 aa13.47□□□□□ -0.25
CLTC-202ENST00000393043 KLHL38Q2WGJ6 581 aa13.47□□□□□ -0.25
CLTC-202ENST00000393043 THEM5Q8N1Q8 247 aa13.47□□□□□ -0.25
CLTC-202ENST00000393043 DEPDC1BQ8WUY9 529 aa13.47□□□□□ -0.25
CLTC-202ENST00000393043 SPDYE16A6NNV3 312 aaPredicted RBP13.47□□□□□ -0.25
CLTC-202ENST00000393043 M0QYV0 167 aa13.47□□□□□ -0.25
CLTC-202ENST00000393043 CIITAP33076 1130 aa13.47□□□□□ -0.25
CLTC-202ENST00000393043 MXD4Q14582 209 aaPredicted RBP13.47□□□□□ -0.25
CLTC-202ENST00000393043 SPDYE2Q495Y8 402 aa13.47□□□□□ -0.25
CLTC-202ENST00000393043 CCDC137Q6PK04 289 aaKnown RBP13.47□□□□□ -0.25
CLTC-202ENST00000393043 RDM1Q8NG50 284 aa13.47□□□□□ -0.25
CLTC-202ENST00000393043 HVCN1Q96D96 273 aa13.47□□□□□ -0.25
CLTC-202ENST00000393043 Q9H521 79 aa13.47□□□□□ -0.25
CLTC-202ENST00000393043 NAA30Q147X3 362 aaPredicted RBP13.47□□□□□ -0.25
CLTC-202ENST00000393043 NAB2Q15742 525 aa13.47□□□□□ -0.25
CLTC-202ENST00000393043 DBN1Q16643 649 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms