RNA–Protein interactions for RNA: ENST00000392399.3

UBBP1-201, Transcript of ubiquitin B pseudogene 1, humanhuman

BASIC

Gene UBBP1, Length 473 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP1-201ENST00000392399 PEX3P56589 373 aa7.46□□□□□ -1.22
UBBP1-201ENST00000392399 WDR5P61964 334 aaKnown RBP7.46□□□□□ -1.22
UBBP1-201ENST00000392399 FAM189BP81408 668 aa7.46□□□□□ -1.22
UBBP1-201ENST00000392399 MBTD1Q05BQ5 628 aa7.46□□□□□ -1.22
UBBP1-201ENST00000392399 DSC3Q14574 896 aa7.46□□□□□ -1.22
UBBP1-201ENST00000392399 MAPK6Q16659 721 aa7.46□□□□□ -1.22
UBBP1-201ENST00000392399 RTN4RL1Q86UN2 441 aaPredicted RBP7.46□□□□□ -1.22
UBBP1-201ENST00000392399 CCDC65Q8IXS2 484 aa7.46□□□□□ -1.22
UBBP1-201ENST00000392399 MYCT1Q8N699 235 aa7.46□□□□□ -1.22
UBBP1-201ENST00000392399 FSIP1Q8NA03 581 aa7.46□□□□□ -1.22
UBBP1-201ENST00000392399 TMEM87AQ8NBN3 555 aa7.46□□□□□ -1.22
UBBP1-201ENST00000392399 CNNM3Q8NE01 707 aa7.46□□□□□ -1.22
UBBP1-201ENST00000392399 LRRC15Q8TF66 581 aa7.46□□□□□ -1.22
UBBP1-201ENST00000392399 DHX58Q96C10 678 aa7.46□□□□□ -1.22
UBBP1-201ENST00000392399 DNAJC19Q96DA6 116 aa7.46□□□□□ -1.22
UBBP1-201ENST00000392399 CHAMP1Q96JM3 812 aa7.46□□□□□ -1.22
UBBP1-201ENST00000392399 ZNF668Q96K58 619 aaPredicted RBP7.46□□□□□ -1.22
UBBP1-201ENST00000392399 ADAM2Q99965 735 aa7.46□□□□□ -1.22
UBBP1-201ENST00000392399 C7orf25Q9BPX7 421 aa7.46□□□□□ -1.22
UBBP1-201ENST00000392399 REEP2Q9BRK0 252 aa7.46□□□□□ -1.22
UBBP1-201ENST00000392399 TMX1Q9H3N1 280 aa7.46□□□□□ -1.22
UBBP1-201ENST00000392399 ST6GALNAC4Q9H4F1 302 aa7.46□□□□□ -1.22
UBBP1-201ENST00000392399 ELAC1Q9H777 363 aaKnown RBP7.46□□□□□ -1.22
UBBP1-201ENST00000392399 MINDY3Q9H8M7 445 aa7.46□□□□□ -1.22
UBBP1-201ENST00000392399 GDPD2Q9HCC8 539 aa7.46□□□□□ -1.22
UBBP1-201ENST00000392399 KMT5AQ9NQR1 393 aa7.46□□□□□ -1.22
UBBP1-201ENST00000392399 AGPAT5Q9NUQ2 364 aa7.46□□□□□ -1.22
UBBP1-201ENST00000392399 CXXC1Q9P0U4 656 aaPredicted RBP7.46□□□□□ -1.22
UBBP1-201ENST00000392399 ARHGAP28Q9P2N2 729 aa7.46□□□□□ -1.22
UBBP1-201ENST00000392399 TCHHQ07283 1943 aa7.45□□□□□ -1.22
UBBP1-201ENST00000392399 A0A1B0GUA9 196 aa7.45□□□□□ -1.22
UBBP1-201ENST00000392399 PVALEFA0A1B0GWK0 134 aa7.45□□□□□ -1.22
UBBP1-201ENST00000392399 FRMD3A2A2Y4 597 aa7.45□□□□□ -1.22
UBBP1-201ENST00000392399 SFI1A8K8P3 1242 aa7.45□□□□□ -1.22
UBBP1-201ENST00000392399 C9IYK1 514 aa7.45□□□□□ -1.22
UBBP1-201ENST00000392399 HOXA2O43364 376 aa7.45□□□□□ -1.22
UBBP1-201ENST00000392399 TRAK2O60296 914 aa7.45□□□□□ -1.22
UBBP1-201ENST00000392399 CSDE1O75534 798 aaKnown RBP7.45□□□□□ -1.22
UBBP1-201ENST00000392399 ZNF202O95125 648 aa7.45□□□□□ -1.22
UBBP1-201ENST00000392399 GJB5O95377 273 aa7.45□□□□□ -1.22
UBBP1-201ENST00000392399 HOXA11P31270 313 aaPredicted RBP7.45□□□□□ -1.22
UBBP1-201ENST00000392399 SARSP49591 514 aaKnown RBP7.45□□□□□ -1.22
UBBP1-201ENST00000392399 RAB27AP51159 221 aa7.45□□□□□ -1.22
UBBP1-201ENST00000392399 NDUFA8P51970 172 aa7.45□□□□□ -1.22
UBBP1-201ENST00000392399 NCKAP1LP55160 1127 aa7.45□□□□□ -1.22
UBBP1-201ENST00000392399 RAD51AP2Q09MP3 1159 aa7.45□□□□□ -1.22
UBBP1-201ENST00000392399 STRN3Q13033 797 aa7.45□□□□□ -1.22
UBBP1-201ENST00000392399 ALCAMQ13740 583 aa7.45□□□□□ -1.22
UBBP1-201ENST00000392399 RAB30Q15771 203 aa7.45□□□□□ -1.22
UBBP1-201ENST00000392399 AMHR2Q16671 573 aa7.45□□□□□ -1.22
UBBP1-201ENST00000392399 TCTN1Q2MV58 587 aa7.45□□□□□ -1.22
UBBP1-201ENST00000392399 LONRF3Q496Y0 759 aa7.45□□□□□ -1.22
UBBP1-201ENST00000392399 HABP4Q5JVS0 413 aaKnown RBP7.45□□□□□ -1.22
UBBP1-201ENST00000392399 GPR153Q6NV75 609 aa7.45□□□□□ -1.22
UBBP1-201ENST00000392399 NOTUMQ6P988 496 aa7.45□□□□□ -1.22
UBBP1-201ENST00000392399 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.45□□□□□ -1.22
UBBP1-201ENST00000392399 DYMQ7RTS9 669 aa7.45□□□□□ -1.22
UBBP1-201ENST00000392399 APBB1IPQ7Z5R6 666 aaPredicted RBP7.45□□□□□ -1.22
UBBP1-201ENST00000392399 NPAS4Q8IUM7 802 aa7.45□□□□□ -1.22
UBBP1-201ENST00000392399 HERC6Q8IVU3 1022 aa7.45□□□□□ -1.22
UBBP1-201ENST00000392399 FAM178BQ8IXR5 827 aa7.45□□□□□ -1.22
UBBP1-201ENST00000392399 ELOA2Q8IYF1 753 aaPredicted RBP7.45□□□□□ -1.22
UBBP1-201ENST00000392399 MYOCDQ8IZQ8 938 aa7.45□□□□□ -1.22
UBBP1-201ENST00000392399 TMEM161BQ8NDZ6 487 aa7.45□□□□□ -1.22
UBBP1-201ENST00000392399 BSNDQ8WZ55 320 aa7.45□□□□□ -1.22
UBBP1-201ENST00000392399 TIGD1Q96MW7 591 aa7.45□□□□□ -1.22
UBBP1-201ENST00000392399 RAD9AQ99638 391 aa7.45□□□□□ -1.22
UBBP1-201ENST00000392399 ZBED2Q9BTP6 218 aa7.45□□□□□ -1.22
UBBP1-201ENST00000392399 TRIM9Q9C026 710 aa7.45□□□□□ -1.22
UBBP1-201ENST00000392399 OLFML3Q9NRN5 406 aa7.45□□□□□ -1.22
UBBP1-201ENST00000392399 TMEM161AQ9NX61 479 aa7.45□□□□□ -1.22
UBBP1-201ENST00000392399 SERTAD1Q9UHV2 236 aa7.45□□□□□ -1.22
UBBP1-201ENST00000392399 MSRAQ9UJ68 235 aa7.45□□□□□ -1.22
UBBP1-201ENST00000392399 PIN4Q9Y237 131 aaKnown RBP7.45□□□□□ -1.22
UBBP1-201ENST00000392399 INSL6Q9Y581 213 aa7.45□□□□□ -1.22
UBBP1-201ENST00000392399 PCDHB7Q9Y5E2 793 aa7.45□□□□□ -1.22
UBBP1-201ENST00000392399 PCDHA11Q9Y5I1 949 aa7.45□□□□□ -1.22
UBBP1-201ENST00000392399 SCN5AQ14524 2016 aa7.45□□□□□ -1.22
UBBP1-201ENST00000392399 ARID2Q68CP9 1835 aa7.45□□□□□ -1.22
UBBP1-201ENST00000392399 TMEM265A0A087WTH1 108 aa7.44□□□□□ -1.22
UBBP1-201ENST00000392399 NPHP3-ACAD11A0A0J9YXS1 232 aa7.44□□□□□ -1.22
UBBP1-201ENST00000392399 N4BP3O15049 544 aa7.44□□□□□ -1.22
UBBP1-201ENST00000392399 SLC16A4O15374 487 aa7.44□□□□□ -1.22
UBBP1-201ENST00000392399 ACTN4O43707 911 aaKnown RBP7.44□□□□□ -1.22
UBBP1-201ENST00000392399 MGEA5O60502 916 aa7.44□□□□□ -1.22
UBBP1-201ENST00000392399 TSPAN1O60635 241 aa7.44□□□□□ -1.22
UBBP1-201ENST00000392399 PRKCBP05771 671 aa7.44□□□□□ -1.22
UBBP1-201ENST00000392399 IDEP14735 1019 aa7.44□□□□□ -1.22
UBBP1-201ENST00000392399 ARF4P18085 180 aaPredicted RBP7.44□□□□□ -1.22
UBBP1-201ENST00000392399 FGFR4P22455 802 aa7.44□□□□□ -1.22
UBBP1-201ENST00000392399 UBE2HP62256 183 aa7.44□□□□□ -1.22
UBBP1-201ENST00000392399 HTRA4P83105 476 aaPredicted RBP7.44□□□□□ -1.22
UBBP1-201ENST00000392399 GTF2BQ00403 316 aa7.44□□□□□ -1.22
UBBP1-201ENST00000392399 FAM160A1Q05DH4 1040 aa7.44□□□□□ -1.22
UBBP1-201ENST00000392399 PRPF4BQ13523 1007 aaKnown RBP7.44□□□□□ -1.22
UBBP1-201ENST00000392399 HERC4Q5GLZ8 1057 aaPredicted RBP7.44□□□□□ -1.22
UBBP1-201ENST00000392399 TWF2Q6IBS0 349 aaKnown RBP7.44□□□□□ -1.22
UBBP1-201ENST00000392399 SLC27A1Q6PCB7 646 aa7.44□□□□□ -1.22
UBBP1-201ENST00000392399 ZPBP2Q6X784 338 aa7.44□□□□□ -1.22
UBBP1-201ENST00000392399 KRBA2Q6ZNG9 492 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms