RNA–Protein interactions for RNA: ENST00000392343.3

CCDC57-203, Transcript of coiled-coil domain containing 57, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC57, Length 2,896 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-203ENST00000392343 TCP10Q12799 353 aa15.06■□□□□ 0
CCDC57-203ENST00000392343 TNIP1Q15025 636 aa15.06■□□□□ 0
CCDC57-203ENST00000392343 TRIP13Q15645 432 aaPredicted RBP15.06■□□□□ 0
CCDC57-203ENST00000392343 NUGGCQ68CJ6 796 aa15.06■□□□□ 0
CCDC57-203ENST00000392343 RPGRQ92834 1020 aaKnown RBP15.06■□□□□ 0
CCDC57-203ENST00000392343 PWWP2AQ96N64 755 aa15.06■□□□□ 0
CCDC57-203ENST00000392343 MTRF1LQ9UGC7 380 aaKnown RBP15.06■□□□□ 0
CCDC57-203ENST00000392343 ANKRD62A6NC57 917 aa15.06■□□□□ 0
CCDC57-203ENST00000392343 SNX3O60493 162 aa15.06■□□□□ 0
CCDC57-203ENST00000392343 AGTP01019 485 aa15.06■□□□□ 0
CCDC57-203ENST00000392343 RARAP10276 462 aa15.06■□□□□ 0
CCDC57-203ENST00000392343 PDE6BP35913 854 aa15.06■□□□□ 0
CCDC57-203ENST00000392343 MMP14P50281 582 aa15.06■□□□□ 0
CCDC57-203ENST00000392343 ITIH4Q14624 930 aa15.06■□□□□ 0
CCDC57-203ENST00000392343 TRMT1LQ7Z2T5 733 aaKnown RBP15.06■□□□□ 0
CCDC57-203ENST00000392343 MAGEC3Q8TD91 643 aa15.06■□□□□ 0
CCDC57-203ENST00000392343 KAT5Q92993 513 aa15.06■□□□□ 0
CCDC57-203ENST00000392343 SYT11Q9BT88 431 aa15.06■□□□□ 0
CCDC57-203ENST00000392343 CDCA7Q9BWT1 371 aaPredicted RBP15.06■□□□□ 0
CCDC57-203ENST00000392343 APEX2Q9UBZ4 518 aa15.06■□□□□ 0
CCDC57-203ENST00000392343 TBK1Q9UHD2 729 aa15.06■□□□□ 0
CCDC57-203ENST00000392343 ADCY2Q08462 1091 aa15.05■□□□□ 0
CCDC57-203ENST00000392343 NFIAQ12857 509 aa15.05■□□□□ 0
CCDC57-203ENST00000392343 TBC1D10BQ4KMP7 808 aaPredicted RBP15.05■□□□□ 0
CCDC57-203ENST00000392343 NSMFQ6X4W1 530 aa15.05■□□□□ 0
CCDC57-203ENST00000392343 CNBD1Q8NA66 436 aa15.05■□□□□ 0
CCDC57-203ENST00000392343 AGPAT1Q99943 283 aa15.05■□□□□ 0
CCDC57-203ENST00000392343 KIF1CO43896 1103 aaKnown RBP15.05■□□□□ -0
CCDC57-203ENST00000392343 DIAPH2O60879 1101 aa15.05■□□□□ -0
CCDC57-203ENST00000392343 EEF2P13639 858 aaKnown RBP15.05■□□□□ -0
CCDC57-203ENST00000392343 NCALDP61601 193 aa15.05■□□□□ -0
CCDC57-203ENST00000392343 MYL7Q01449 175 aa15.05■□□□□ -0
CCDC57-203ENST00000392343 RPUSD2Q8IZ73 545 aaKnown RBP15.05■□□□□ -0
CCDC57-203ENST00000392343 C1orf54Q8WWF1 131 aa15.05■□□□□ -0
CCDC57-203ENST00000392343 CYP3A7-CYP3A51PA0A087WV96 503 aa15.04■□□□□ -0
CCDC57-203ENST00000392343 TMEM120BA0PK00 339 aa15.04■□□□□ -0
CCDC57-203ENST00000392343 KRT16P08779 473 aa15.04■□□□□ -0
CCDC57-203ENST00000392343 IL1R1P14778 569 aa15.04■□□□□ -0
CCDC57-203ENST00000392343 NQO1P15559 274 aaKnown RBP15.04■□□□□ -0
CCDC57-203ENST00000392343 CYP3A7P24462 503 aa15.04■□□□□ -0
CCDC57-203ENST00000392343 ANXA13P27216 316 aa15.04■□□□□ -0
CCDC57-203ENST00000392343 MAP2K1Q02750 393 aaPredicted RBP15.04■□□□□ -0
CCDC57-203ENST00000392343 COL23A1Q86Y22 540 aaPredicted RBP15.04■□□□□ -0
CCDC57-203ENST00000392343 ARHGEF19Q8IW93 802 aa15.04■□□□□ -0
CCDC57-203ENST00000392343 ARHGEF2Q92974 986 aaKnown RBP15.04■□□□□ -0
CCDC57-203ENST00000392343 DYDC2Q96IM9 177 aa15.04■□□□□ -0
CCDC57-203ENST00000392343 CRAMP1Q96RY5 1269 aa15.04■□□□□ -0
CCDC57-203ENST00000392343 GAKO14976 1311 aa15.04■□□□□ -0
CCDC57-203ENST00000392343 AFF2P51816 1311 aa15.04■□□□□ -0
CCDC57-203ENST00000392343 TNRC6CQ9HCJ0 1690 aaKnown RBP15.04■□□□□ -0
CCDC57-203ENST00000392343 COL14A1Q05707 1796 aaKnown RBP15.04■□□□□ -0
CCDC57-203ENST00000392343 PFASO15067 1338 aa15.04■□□□□ -0
CCDC57-203ENST00000392343 A0A1B0GUA9 196 aa15.04■□□□□ -0
CCDC57-203ENST00000392343 GTPBP10A4D1E9 387 aaKnown RBP15.04■□□□□ -0
CCDC57-203ENST00000392343 EXOC3O60645 756 aa15.04■□□□□ -0
CCDC57-203ENST00000392343 DLATP10515 647 aaKnown RBP15.04■□□□□ -0
CCDC57-203ENST00000392343 CHRNA3P32297 505 aa15.04■□□□□ -0
CCDC57-203ENST00000392343 VPS41P49754 854 aa15.04■□□□□ -0
CCDC57-203ENST00000392343 BMT2Q1RMZ1 405 aa15.04■□□□□ -0
CCDC57-203ENST00000392343 SLFN13Q68D06 897 aa15.04■□□□□ -0
CCDC57-203ENST00000392343 UBL4BQ8N7F7 174 aa15.04■□□□□ -0
CCDC57-203ENST00000392343 KLHL29Q96CT2 875 aa15.04■□□□□ -0
CCDC57-203ENST00000392343 RSRC1Q96IZ7 334 aaKnown RBP15.04■□□□□ -0
CCDC57-203ENST00000392343 ZSWIM1Q9BR11 485 aa15.04■□□□□ -0
CCDC57-203ENST00000392343 DIS3Q9Y2L1 958 aaKnown RBP15.04■□□□□ -0
CCDC57-203ENST00000392343 FRMD4BQ9Y2L6 1034 aa15.04■□□□□ -0
CCDC57-203ENST00000392343 PCDHA3Q9Y5H8 950 aa15.04■□□□□ -0
CCDC57-203ENST00000392343 SMCHD1A6NHR9 2005 aa15.04■□□□□ -0
CCDC57-203ENST00000392343 CHKAP35790 457 aa15.03■□□□□ -0
CCDC57-203ENST00000392343 PPP2R5AQ15172 486 aa15.03■□□□□ -0
CCDC57-203ENST00000392343 SEL1L2Q5TEA6 688 aa15.03■□□□□ -0
CCDC57-203ENST00000392343 SAMD1Q6SPF0 538 aaPredicted RBP15.03■□□□□ -0
CCDC57-203ENST00000392343 PHLDB2Q86SQ0 1253 aa15.03■□□□□ -0
CCDC57-203ENST00000392343 SLF2Q8IX21 1173 aa15.03■□□□□ -0
CCDC57-203ENST00000392343 ZSWIM2Q8NEG5 633 aa15.03■□□□□ -0
CCDC57-203ENST00000392343 FAM163AQ96GL9 167 aaPredicted RBP15.03■□□□□ -0
CCDC57-203ENST00000392343 NAP1L4Q99733 375 aaKnown RBP15.03■□□□□ -0
CCDC57-203ENST00000392343 CDC42EP4Q9H3Q1 356 aaKnown RBP15.03■□□□□ -0
CCDC57-203ENST00000392343 USP15Q9Y4E8 981 aaPredicted RBP15.03■□□□□ -0
CCDC57-203ENST00000392343 PCDHAC2Q9Y5I4 1007 aa15.03■□□□□ -0
CCDC57-203ENST00000392343 NHSQ6T4R5 1651 aa15.03■□□□□ -0
CCDC57-203ENST00000392343 CNTNAP4Q9C0A0 1308 aa15.03■□□□□ -0
CCDC57-203ENST00000392343 KIF13BQ9NQT8 1826 aa15.03■□□□□ -0
CCDC57-203ENST00000392343 EYA4O95677 639 aa15.03■□□□□ -0
CCDC57-203ENST00000392343 MYCNP04198 464 aaPredicted RBP15.03■□□□□ -0
CCDC57-203ENST00000392343 PDE6CP51160 858 aa15.03■□□□□ -0
CCDC57-203ENST00000392343 MPP2Q14168 576 aa15.03■□□□□ -0
CCDC57-203ENST00000392343 SYCP3Q8IZU3 236 aa15.03■□□□□ -0
CCDC57-203ENST00000392343 FAXDC2Q96IV6 333 aa15.03■□□□□ -0
CCDC57-203ENST00000392343 NSRP1Q9H0G5 558 aaKnown RBP15.03■□□□□ -0
CCDC57-203ENST00000392343 AGPAT3Q9NRZ7 376 aa15.03■□□□□ -0
CCDC57-203ENST00000392343 VAV3Q9UKW4 847 aa15.03■□□□□ -0
CCDC57-203ENST00000392343 SYNGAP1Q96PV0 1343 aa15.03■□□□□ -0
CCDC57-203ENST00000392343 SPOPO43791 374 aa15.03■□□□□ -0
CCDC57-203ENST00000392343 SGPL1O95470 568 aa15.03■□□□□ -0
CCDC57-203ENST00000392343 GSTA1P08263 222 aa15.03■□□□□ -0
CCDC57-203ENST00000392343 COILP38432 576 aaPredicted RBP15.03■□□□□ -0
CCDC57-203ENST00000392343 GCLMP48507 274 aa15.03■□□□□ -0
CCDC57-203ENST00000392343 DRG2P55039 364 aaKnown RBP15.03■□□□□ -0
CCDC57-203ENST00000392343 SPDYCQ5MJ68 293 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms