RNA–Protein interactions for RNA: ENST00000392169.6

SDHC-203, Transcript of succinate dehydrogenase complex subunit C, humanhuman

TSL 1 (best) BASIC

Gene SDHC, Length 369 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHC-203ENST00000392169 KHSRPQ92945 711 aaKnown RBP eCLIP7.5□□□□□ -1.21
SDHC-203ENST00000392169 TMEM169Q96HH4 297 aa7.5□□□□□ -1.21
SDHC-203ENST00000392169 CPB2Q96IY4 423 aa7.5□□□□□ -1.21
SDHC-203ENST00000392169 TMX3Q96JJ7 454 aa7.5□□□□□ -1.21
SDHC-203ENST00000392169 MSLNLQ96KJ4 702 aa7.5□□□□□ -1.21
SDHC-203ENST00000392169 CDCA3Q99618 268 aaPredicted RBP7.5□□□□□ -1.21
SDHC-203ENST00000392169 POLR3CQ9BUI4 534 aaPredicted RBP7.5□□□□□ -1.21
SDHC-203ENST00000392169 C1QTNF1Q9BXJ1 281 aa7.5□□□□□ -1.21
SDHC-203ENST00000392169 GBP3Q9H0R5 595 aa7.5□□□□□ -1.21
SDHC-203ENST00000392169 POLR3FQ9H1D9 316 aaPredicted RBP7.5□□□□□ -1.21
SDHC-203ENST00000392169 NGRNQ9NPE2 291 aaKnown RBP7.5□□□□□ -1.21
SDHC-203ENST00000392169 GPRC5CQ9NQ84 441 aa7.5□□□□□ -1.21
SDHC-203ENST00000392169 TBC1D13Q9NVG8 400 aa7.5□□□□□ -1.21
SDHC-203ENST00000392169 CLEC1BQ9P126 229 aa7.5□□□□□ -1.21
SDHC-203ENST00000392169 PRKAG3Q9UGI9 489 aa7.5□□□□□ -1.21
SDHC-203ENST00000392169 BARX2Q9UMQ3 279 aaPredicted RBP7.5□□□□□ -1.21
SDHC-203ENST00000392169 KIF3AQ9Y496 699 aa7.5□□□□□ -1.21
SDHC-203ENST00000392169 ARID2Q68CP9 1835 aa7.5□□□□□ -1.21
SDHC-203ENST00000392169 ARHGEF35A5YM69 484 aa7.49□□□□□ -1.21
SDHC-203ENST00000392169 LRRIQ4A6NIV6 560 aa7.49□□□□□ -1.21
SDHC-203ENST00000392169 TSPAN1O60635 241 aa7.49□□□□□ -1.21
SDHC-203ENST00000392169 CD2BP2O95400 341 aaKnown RBP7.49□□□□□ -1.21
SDHC-203ENST00000392169 EYA4O95677 639 aa7.49□□□□□ -1.21
SDHC-203ENST00000392169 CXCL14O95715 111 aa7.49□□□□□ -1.21
SDHC-203ENST00000392169 GLP2RO95838 553 aa7.49□□□□□ -1.21
SDHC-203ENST00000392169 ALDH2P05091 517 aa7.49□□□□□ -1.21
SDHC-203ENST00000392169 GALTP07902 379 aa7.49□□□□□ -1.21
SDHC-203ENST00000392169 ITGA4P13612 1032 aa7.49□□□□□ -1.21
SDHC-203ENST00000392169 AXLP30530 894 aa7.49□□□□□ -1.21
SDHC-203ENST00000392169 HOXD11P31277 338 aaPredicted RBP7.49□□□□□ -1.21
SDHC-203ENST00000392169 CCT6AP40227 531 aaKnown RBP7.49□□□□□ -1.21
SDHC-203ENST00000392169 TOB1P50616 345 aaPredicted RBP7.49□□□□□ -1.21
SDHC-203ENST00000392169 AFF1P51825 1210 aaKnown RBP7.49□□□□□ -1.21
SDHC-203ENST00000392169 ZP2Q05996 745 aa7.49□□□□□ -1.21
SDHC-203ENST00000392169 MBTD1Q05BQ5 628 aa7.49□□□□□ -1.21
SDHC-203ENST00000392169 COASYQ13057 564 aa7.49□□□□□ -1.21
SDHC-203ENST00000392169 PTGDRQ13258 359 aa7.49□□□□□ -1.21
SDHC-203ENST00000392169 SMC1AQ14683 1233 aaKnown RBP7.49□□□□□ -1.21
SDHC-203ENST00000392169 BMS1Q14692 1282 aaKnown RBP7.49□□□□□ -1.21
SDHC-203ENST00000392169 DUSP6Q16828 381 aa7.49□□□□□ -1.21
SDHC-203ENST00000392169 HAUS3Q68CZ6 603 aa7.49□□□□□ -1.21
SDHC-203ENST00000392169 LLGL2Q6P1M3 1020 aa7.49□□□□□ -1.21
SDHC-203ENST00000392169 NOTUMQ6P988 496 aa7.49□□□□□ -1.21
SDHC-203ENST00000392169 MRPL10Q7Z7H8 261 aaKnown RBP7.49□□□□□ -1.21
SDHC-203ENST00000392169 TMEM173Q86WV6 379 aaPredicted RBP7.49□□□□□ -1.21
SDHC-203ENST00000392169 ZNF280BQ86YH2 543 aa7.49□□□□□ -1.21
SDHC-203ENST00000392169 IFNLR1Q8IU57 520 aaPredicted RBP7.49□□□□□ -1.21
SDHC-203ENST00000392169 ADHFE1Q8IWW8 467 aa7.49□□□□□ -1.21
SDHC-203ENST00000392169 VPS52Q8N1B4 723 aa7.49□□□□□ -1.21
SDHC-203ENST00000392169 C4orf32Q8N8J7 132 aa7.49□□□□□ -1.21
SDHC-203ENST00000392169 MRPL43Q8N983 215 aaKnown RBP7.49□□□□□ -1.21
SDHC-203ENST00000392169 TMEM87AQ8NBN3 555 aa7.49□□□□□ -1.21
SDHC-203ENST00000392169 CNNM3Q8NE01 707 aa7.49□□□□□ -1.21
SDHC-203ENST00000392169 MCPH1Q8NEM0 835 aa7.49□□□□□ -1.21
SDHC-203ENST00000392169 FAM193BQ96PV7 902 aaPredicted RBP7.49□□□□□ -1.21
SDHC-203ENST00000392169 EIF2AQ9BY44 585 aaKnown RBP7.49□□□□□ -1.21
SDHC-203ENST00000392169 TRIM6Q9C030 488 aaPredicted RBP7.49□□□□□ -1.21
SDHC-203ENST00000392169 RNF39Q9H2S5 420 aa7.49□□□□□ -1.21
SDHC-203ENST00000392169 NRDE2Q9H7Z3 1164 aa7.49□□□□□ -1.21
SDHC-203ENST00000392169 RSAD1Q9HA92 442 aa7.49□□□□□ -1.21
SDHC-203ENST00000392169 KANSL3Q9P2N6 904 aa7.49□□□□□ -1.21
SDHC-203ENST00000392169 DNAJB4Q9UDY4 337 aa7.49□□□□□ -1.21
SDHC-203ENST00000392169 LRWD1Q9UFC0 647 aa7.49□□□□□ -1.21
SDHC-203ENST00000392169 DBR1Q9UK59 544 aaKnown RBP7.49□□□□□ -1.21
SDHC-203ENST00000392169 PCDHB6Q9Y5E3 794 aa7.49□□□□□ -1.21
SDHC-203ENST00000392169 FSD2A1L4K1 749 aa7.48□□□□□ -1.21
SDHC-203ENST00000392169 CARNS1A5YM72 827 aa7.48□□□□□ -1.21
SDHC-203ENST00000392169 C2orf71A6NGG8 1288 aa7.48□□□□□ -1.21
SDHC-203ENST00000392169 PI4K2BG5E9Z4 385 aa7.48□□□□□ -1.21
SDHC-203ENST00000392169 H3BQV1 296 aa7.48□□□□□ -1.21
SDHC-203ENST00000392169 B4GALT5O43286 388 aa7.48□□□□□ -1.21
SDHC-203ENST00000392169 B4GALT3O60512 393 aa7.48□□□□□ -1.21
SDHC-203ENST00000392169 DDHD2O94830 711 aa7.48□□□□□ -1.21
SDHC-203ENST00000392169 POMCP01189 267 aa7.48□□□□□ -1.21
SDHC-203ENST00000392169 SRGAP2BP0DMP2 458 aa7.48□□□□□ -1.21
SDHC-203ENST00000392169 ARF4P18085 180 aaPredicted RBP7.48□□□□□ -1.21
SDHC-203ENST00000392169 CYP11B2P19099 503 aa7.48□□□□□ -1.21
SDHC-203ENST00000392169 NCLP19338 710 aaKnown RBP7.48□□□□□ -1.21
SDHC-203ENST00000392169 COL9A1P20849 921 aa7.48□□□□□ -1.21
SDHC-203ENST00000392169 MUTP22033 750 aa7.48□□□□□ -1.21
SDHC-203ENST00000392169 GJB2P29033 226 aa7.48□□□□□ -1.21
SDHC-203ENST00000392169 SLC11A1P49279 550 aa7.48□□□□□ -1.21
SDHC-203ENST00000392169 MCM2P49736 904 aa7.48□□□□□ -1.21
SDHC-203ENST00000392169 FXR2P51116 673 aaKnown RBP eCLIP7.48□□□□□ -1.21
SDHC-203ENST00000392169 PDIA5Q14554 519 aa7.48□□□□□ -1.21
SDHC-203ENST00000392169 ECM1Q16610 540 aa7.48□□□□□ -1.21
SDHC-203ENST00000392169 AMHR2Q16671 573 aa7.48□□□□□ -1.21
SDHC-203ENST00000392169 TMEM31Q5JXX7 168 aa7.48□□□□□ -1.21
SDHC-203ENST00000392169 PADI6Q6TGC4 694 aa7.48□□□□□ -1.21
SDHC-203ENST00000392169 CDR2LQ86X02 465 aaPredicted RBP7.48□□□□□ -1.21
SDHC-203ENST00000392169 ZBTB8OSQ8IWT0 167 aa7.48□□□□□ -1.21
SDHC-203ENST00000392169 SMRP1Q8NCR6 262 aa7.48□□□□□ -1.21
SDHC-203ENST00000392169 SMG8Q8ND04 991 aaKnown RBP7.48□□□□□ -1.21
SDHC-203ENST00000392169 VN1R2Q8NFZ6 395 aa7.48□□□□□ -1.21
SDHC-203ENST00000392169 CCDC51Q96ER9 411 aa7.48□□□□□ -1.21
SDHC-203ENST00000392169 IGSF21Q96ID5 467 aa7.48□□□□□ -1.21
SDHC-203ENST00000392169 TBC1D32Q96NH3 1257 aa7.48□□□□□ -1.21
SDHC-203ENST00000392169 GAD1Q99259 594 aa7.48□□□□□ -1.21
SDHC-203ENST00000392169 POP1Q99575 1024 aaKnown RBP7.48□□□□□ -1.21
SDHC-203ENST00000392169 APOL6Q9BWW8 343 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms