RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 PCNTO95613 3336 aa12.47□□□□□ -0.41
SMARCAL1-203ENST00000392128 LRRIQ4A6NIV6 560 aa12.47□□□□□ -0.41
SMARCAL1-203ENST00000392128 TLR2O60603 784 aa12.47□□□□□ -0.41
SMARCAL1-203ENST00000392128 ADCYAP1R1P41586 468 aa12.47□□□□□ -0.41
SMARCAL1-203ENST00000392128 GNG11P61952 73 aa12.47□□□□□ -0.41
SMARCAL1-203ENST00000392128 IRF5Q13568 498 aa12.47□□□□□ -0.41
SMARCAL1-203ENST00000392128 CAPSQ13938 189 aa12.47□□□□□ -0.41
SMARCAL1-203ENST00000392128 SLC9C1Q4G0N8 1177 aa12.47□□□□□ -0.41
SMARCAL1-203ENST00000392128 POMGNT1Q8WZA1 660 aa12.47□□□□□ -0.41
SMARCAL1-203ENST00000392128 BICD1Q96G01 975 aa12.47□□□□□ -0.41
SMARCAL1-203ENST00000392128 HAUS4Q9H6D7 363 aa12.47□□□□□ -0.41
SMARCAL1-203ENST00000392128 FHOD1Q9Y613 1164 aa12.47□□□□□ -0.41
SMARCAL1-203ENST00000392128 STYXL1Q9Y6J8 313 aa12.47□□□□□ -0.41
SMARCAL1-203ENST00000392128 TLL2Q9Y6L7 1015 aa12.47□□□□□ -0.41
SMARCAL1-203ENST00000392128 UQCRHLA0A096LP55 91 aa12.46□□□□□ -0.41
SMARCAL1-203ENST00000392128 KIAA0391O15091 583 aaKnown RBP12.46□□□□□ -0.41
SMARCAL1-203ENST00000392128 ADCY3O60266 1144 aa12.46□□□□□ -0.41
SMARCAL1-203ENST00000392128 KIF5CO60282 957 aa12.46□□□□□ -0.41
SMARCAL1-203ENST00000392128 LGALS2P05162 132 aa12.46□□□□□ -0.41
SMARCAL1-203ENST00000392128 ADRB2P07550 413 aa12.46□□□□□ -0.41
SMARCAL1-203ENST00000392128 UQCRHP07919 91 aa12.46□□□□□ -0.41
SMARCAL1-203ENST00000392128 EIF4A3P38919 411 aaKnown RBP12.46□□□□□ -0.41
SMARCAL1-203ENST00000392128 KIF11P52732 1056 aa12.46□□□□□ -0.41
SMARCAL1-203ENST00000392128 JAM2P57087 298 aa12.46□□□□□ -0.41
SMARCAL1-203ENST00000392128 DLG4P78352 724 aa12.46□□□□□ -0.41
SMARCAL1-203ENST00000392128 RAPGEF1Q13905 1077 aa12.46□□□□□ -0.41
SMARCAL1-203ENST00000392128 MXD4Q14582 209 aaPredicted RBP12.46□□□□□ -0.41
SMARCAL1-203ENST00000392128 ASTE1Q2TB18 679 aaPredicted RBP12.46□□□□□ -0.41
SMARCAL1-203ENST00000392128 DUSP28Q4G0W2 176 aa12.46□□□□□ -0.41
SMARCAL1-203ENST00000392128 C1orf220Q5T0J3 134 aa12.46□□□□□ -0.41
SMARCAL1-203ENST00000392128 C17orf99Q6UX52 265 aa12.46□□□□□ -0.41
SMARCAL1-203ENST00000392128 CBWD2Q8IUF1 395 aa12.46□□□□□ -0.41
SMARCAL1-203ENST00000392128 MYO1AQ9UBC5 1043 aa12.46□□□□□ -0.41
SMARCAL1-203ENST00000392128 TRPC6Q9Y210 931 aa12.46□□□□□ -0.41
SMARCAL1-203ENST00000392128 K7ERI5 159 aa12.46□□□□□ -0.42
SMARCAL1-203ENST00000392128 FANCGO15287 622 aa12.46□□□□□ -0.42
SMARCAL1-203ENST00000392128 LIG4P49917 911 aa12.46□□□□□ -0.42
SMARCAL1-203ENST00000392128 CETN1Q12798 172 aa12.46□□□□□ -0.42
SMARCAL1-203ENST00000392128 MAP2K5Q13163 448 aa12.46□□□□□ -0.42
SMARCAL1-203ENST00000392128 MKRN4PQ13434 485 aaPredicted RBP12.46□□□□□ -0.42
SMARCAL1-203ENST00000392128 DRP2Q13474 957 aa12.46□□□□□ -0.42
SMARCAL1-203ENST00000392128 ACVR2BQ13705 512 aa12.46□□□□□ -0.42
SMARCAL1-203ENST00000392128 SPA17Q15506 151 aa12.46□□□□□ -0.42
SMARCAL1-203ENST00000392128 GJC2Q5T442 439 aaPredicted RBP12.46□□□□□ -0.42
SMARCAL1-203ENST00000392128 GPD1LQ8N335 351 aa12.46□□□□□ -0.42
SMARCAL1-203ENST00000392128 PLEKHO2Q8TD55 490 aa12.46□□□□□ -0.42
SMARCAL1-203ENST00000392128 TMC2Q8TDI7 906 aa12.46□□□□□ -0.42
SMARCAL1-203ENST00000392128 PRPF31Q8WWY3 499 aaKnown RBP12.46□□□□□ -0.42
SMARCAL1-203ENST00000392128 PSPC1Q8WXF1 523 aaKnown RBP12.46□□□□□ -0.42
SMARCAL1-203ENST00000392128 SAAL1Q96ER3 474 aa12.46□□□□□ -0.42
SMARCAL1-203ENST00000392128 MFSD14AQ96MC6 490 aa12.46□□□□□ -0.42
SMARCAL1-203ENST00000392128 SPAG5Q96R06 1193 aa12.46□□□□□ -0.42
SMARCAL1-203ENST00000392128 WDR24Q96S15 920 aa12.46□□□□□ -0.42
SMARCAL1-203ENST00000392128 DEF6Q9H4E7 631 aa12.46□□□□□ -0.42
SMARCAL1-203ENST00000392128 L2HGDHQ9H9P8 463 aa12.46□□□□□ -0.42
SMARCAL1-203ENST00000392128 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.45□□□□□ -0.42
SMARCAL1-203ENST00000392128 GOLGA8IPA6NC78 632 aa12.45□□□□□ -0.42
SMARCAL1-203ENST00000392128 GOLGA8JA6NMD2 632 aa12.45□□□□□ -0.42
SMARCAL1-203ENST00000392128 FAM155AB1AL88 458 aaPredicted RBP12.45□□□□□ -0.42
SMARCAL1-203ENST00000392128 HOXC6P09630 235 aa12.45□□□□□ -0.42
SMARCAL1-203ENST00000392128 HOXD8P13378 290 aaPredicted RBP12.45□□□□□ -0.42
SMARCAL1-203ENST00000392128 RFX1P22670 979 aa12.45□□□□□ -0.42
SMARCAL1-203ENST00000392128 EFNA5P52803 228 aa12.45□□□□□ -0.42
SMARCAL1-203ENST00000392128 PPP3CAQ08209 521 aa12.45□□□□□ -0.42
SMARCAL1-203ENST00000392128 HSP90AA2PQ14568 343 aaPredicted RBP12.45□□□□□ -0.42
SMARCAL1-203ENST00000392128 ASIC2Q16515 512 aa12.45□□□□□ -0.42
SMARCAL1-203ENST00000392128 ZNF484Q5JVG2 852 aa12.45□□□□□ -0.42
SMARCAL1-203ENST00000392128 CDCA2Q69YH5 1023 aaPredicted RBP12.45□□□□□ -0.42
SMARCAL1-203ENST00000392128 IQSEC1Q6DN90 963 aa12.45□□□□□ -0.42
SMARCAL1-203ENST00000392128 USP37Q86T82 979 aa12.45□□□□□ -0.42
SMARCAL1-203ENST00000392128 LMO3Q8TAP4 145 aa12.45□□□□□ -0.42
SMARCAL1-203ENST00000392128 AFG1LQ8WV93 481 aa12.45□□□□□ -0.42
SMARCAL1-203ENST00000392128 INTS2Q9H0H0 1204 aaKnown RBP12.45□□□□□ -0.42
SMARCAL1-203ENST00000392128 KIAA1586Q9HCI6 787 aa12.45□□□□□ -0.42
SMARCAL1-203ENST00000392128 ZSWIM8A7E2V4 1837 aa12.45□□□□□ -0.42
SMARCAL1-203ENST00000392128 RBAK-RBAKDNI3L0D1 243 aa12.45□□□□□ -0.42
SMARCAL1-203ENST00000392128 ZNF263O14978 683 aa12.45□□□□□ -0.42
SMARCAL1-203ENST00000392128 AKR1B10O60218 316 aa12.45□□□□□ -0.42
SMARCAL1-203ENST00000392128 PPFIA4O75335 1185 aa12.45□□□□□ -0.42
SMARCAL1-203ENST00000392128 SMPD1P17405 629 aa12.45□□□□□ -0.42
SMARCAL1-203ENST00000392128 CASQ1P31415 396 aa12.45□□□□□ -0.42
SMARCAL1-203ENST00000392128 VAV2P52735 878 aa12.45□□□□□ -0.42
SMARCAL1-203ENST00000392128 SREBF2Q12772 1141 aa12.45□□□□□ -0.42
SMARCAL1-203ENST00000392128 TDRD12Q587J7 1177 aaKnown RBP12.45□□□□□ -0.42
SMARCAL1-203ENST00000392128 SLFN12LQ6IEE8 588 aa12.45□□□□□ -0.42
SMARCAL1-203ENST00000392128 IQCEQ6IPM2 695 aa12.45□□□□□ -0.42
SMARCAL1-203ENST00000392128 KIAA1328Q86T90 577 aa12.45□□□□□ -0.42
SMARCAL1-203ENST00000392128 EHBP1Q8NDI1 1231 aa12.45□□□□□ -0.42
SMARCAL1-203ENST00000392128 PARD3BQ8TEW8 1205 aa12.45□□□□□ -0.42
SMARCAL1-203ENST00000392128 CCDC102AQ96A19 550 aa12.45□□□□□ -0.42
SMARCAL1-203ENST00000392128 IRX2Q9BZI1 471 aaPredicted RBP12.45□□□□□ -0.42
SMARCAL1-203ENST00000392128 APEX2Q9UBZ4 518 aa12.45□□□□□ -0.42
SMARCAL1-203ENST00000392128 USP20Q9Y2K6 914 aa12.45□□□□□ -0.42
SMARCAL1-203ENST00000392128 BZW2Q9Y6E2 419 aaKnown RBP12.45□□□□□ -0.42
SMARCAL1-203ENST00000392128 EXTL3O43909 919 aa12.44□□□□□ -0.42
SMARCAL1-203ENST00000392128 BRD2P25440 801 aaKnown RBP12.44□□□□□ -0.42
SMARCAL1-203ENST00000392128 PRKCIP41743 596 aa12.44□□□□□ -0.42
SMARCAL1-203ENST00000392128 CYP24A1Q07973 514 aa12.44□□□□□ -0.42
SMARCAL1-203ENST00000392128 LAMTOR4Q0VGL1 99 aa12.44□□□□□ -0.42
SMARCAL1-203ENST00000392128 EPC2Q52LR7 807 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms