RNA–Protein interactions for RNA: ENST00000390457.2

TRAV27-201, Transcript of T cell receptor alpha variable 27, humanhuman

APPRIS P1 BASIC

Gene TRAV27, Length 425 nt, Biotype TR V gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27-201ENST00000390457 SAMM50Q9Y512 469 aa7.9□□□□□ -1.14
TRAV27-201ENST00000390457 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.89□□□□□ -1.15
TRAV27-201ENST00000390457 GAS7O60861 476 aa7.89□□□□□ -1.15
TRAV27-201ENST00000390457 N4BP1O75113 896 aaKnown RBP7.89□□□□□ -1.15
TRAV27-201ENST00000390457 ZC3H11AO75152 810 aaKnown RBP eCLIP7.89□□□□□ -1.15
TRAV27-201ENST00000390457 DDHD2O94830 711 aa7.89□□□□□ -1.15
TRAV27-201ENST00000390457 CNPP09543 421 aaKnown RBP7.89□□□□□ -1.15
TRAV27-201ENST00000390457 IFNAR1P17181 557 aa7.89□□□□□ -1.15
TRAV27-201ENST00000390457 AOC1P19801 751 aa7.89□□□□□ -1.15
TRAV27-201ENST00000390457 HOXA11P31270 313 aaPredicted RBP7.89□□□□□ -1.15
TRAV27-201ENST00000390457 CLCN4P51793 760 aa7.89□□□□□ -1.15
TRAV27-201ENST00000390457 IRX6P78412 446 aaPredicted RBP7.89□□□□□ -1.15
TRAV27-201ENST00000390457 BMS1Q14692 1282 aaKnown RBP7.89□□□□□ -1.15
TRAV27-201ENST00000390457 UBXN11Q5T124 520 aa7.89□□□□□ -1.15
TRAV27-201ENST00000390457 LRCH2Q5VUJ6 765 aa7.89□□□□□ -1.15
TRAV27-201ENST00000390457 Q6ZUG5 572 aa7.89□□□□□ -1.15
TRAV27-201ENST00000390457 ANO5Q75V66 913 aa7.89□□□□□ -1.15
TRAV27-201ENST00000390457 PPFIBP1Q86W92 1011 aa7.89□□□□□ -1.15
TRAV27-201ENST00000390457 SKAP1Q86WV1 359 aa7.89□□□□□ -1.15
TRAV27-201ENST00000390457 KSR1Q8IVT5 923 aa7.89□□□□□ -1.15
TRAV27-201ENST00000390457 RNF168Q8IYW5 571 aaPredicted RBP7.89□□□□□ -1.15
TRAV27-201ENST00000390457 CMASQ8NFW8 434 aaPredicted RBP7.89□□□□□ -1.15
TRAV27-201ENST00000390457 ETNPPLQ8TBG4 499 aa7.89□□□□□ -1.15
TRAV27-201ENST00000390457 BICD2Q8TD16 824 aa7.89□□□□□ -1.15
TRAV27-201ENST00000390457 NLRP7Q8WX94 980 aa7.89□□□□□ -1.15
TRAV27-201ENST00000390457 BRF1Q92994 677 aa7.89□□□□□ -1.15
TRAV27-201ENST00000390457 RNF166Q96A37 237 aaPredicted RBP7.89□□□□□ -1.15
TRAV27-201ENST00000390457 KLHL5Q96PQ7 755 aa7.89□□□□□ -1.15
TRAV27-201ENST00000390457 SH2D3AQ9BRG2 576 aa7.89□□□□□ -1.15
TRAV27-201ENST00000390457 TEKT3Q9BXF9 490 aa7.89□□□□□ -1.15
TRAV27-201ENST00000390457 DBR1Q9UK59 544 aaKnown RBP7.89□□□□□ -1.15
TRAV27-201ENST00000390457 DOCK6Q96HP0 2047 aa7.89□□□□□ -1.15
TRAV27-201ENST00000390457 F5P12259 2224 aa7.88□□□□□ -1.15
TRAV27-201ENST00000390457 INPPL1O15357 1258 aa7.88□□□□□ -1.15
TRAV27-201ENST00000390457 CHMP2AO43633 222 aa7.88□□□□□ -1.15
TRAV27-201ENST00000390457 TDP2O95551 362 aa7.88□□□□□ -1.15
TRAV27-201ENST00000390457 SKIP12755 728 aa7.88□□□□□ -1.15
TRAV27-201ENST00000390457 SFPQP23246 707 aaKnown RBP eCLIP7.88□□□□□ -1.15
TRAV27-201ENST00000390457 RAB27AP51159 221 aa7.88□□□□□ -1.15
TRAV27-201ENST00000390457 TDGQ13569 410 aa7.88□□□□□ -1.15
TRAV27-201ENST00000390457 LONRF3Q496Y0 759 aa7.88□□□□□ -1.15
TRAV27-201ENST00000390457 MTERF2Q49AM1 385 aa7.88□□□□□ -1.15
TRAV27-201ENST00000390457 TWF2Q6IBS0 349 aaKnown RBP7.88□□□□□ -1.15
TRAV27-201ENST00000390457 MOXD1Q6UVY6 613 aa7.88□□□□□ -1.15
TRAV27-201ENST00000390457 GLB1LQ6UWU2 654 aa7.88□□□□□ -1.15
TRAV27-201ENST00000390457 C15orf39Q6ZRI6 1047 aa7.88□□□□□ -1.15
TRAV27-201ENST00000390457 OTOP3Q7RTS5 596 aa7.88□□□□□ -1.15
TRAV27-201ENST00000390457 MIER3Q7Z3K6 550 aa7.88□□□□□ -1.15
TRAV27-201ENST00000390457 FRMD5Q7Z6J6 570 aa7.88□□□□□ -1.15
TRAV27-201ENST00000390457 CABP7Q86V35 215 aa7.88□□□□□ -1.15
TRAV27-201ENST00000390457 CCDC105Q8IYK2 499 aa7.88□□□□□ -1.15
TRAV27-201ENST00000390457 TBCKQ8TEA7 893 aa7.88□□□□□ -1.15
TRAV27-201ENST00000390457 INO80BQ9C086 356 aaPredicted RBP7.88□□□□□ -1.15
TRAV27-201ENST00000390457 MINDY3Q9H8M7 445 aa7.88□□□□□ -1.15
TRAV27-201ENST00000390457 SFXN1Q9H9B4 322 aa7.88□□□□□ -1.15
TRAV27-201ENST00000390457 KCNK12Q9HB15 430 aa7.88□□□□□ -1.15
TRAV27-201ENST00000390457 SH3GLB2Q9NR46 395 aa7.88□□□□□ -1.15
TRAV27-201ENST00000390457 AGPAT5Q9NUQ2 364 aa7.88□□□□□ -1.15
TRAV27-201ENST00000390457 VPS54Q9P1Q0 977 aa7.88□□□□□ -1.15
TRAV27-201ENST00000390457 SUCLA2Q9P2R7 463 aaPredicted RBP7.88□□□□□ -1.15
TRAV27-201ENST00000390457 TCEAL9Q9UHQ7 104 aa7.88□□□□□ -1.15
TRAV27-201ENST00000390457 DUSP12Q9UNI6 340 aa7.88□□□□□ -1.15
TRAV27-201ENST00000390457 PIN4Q9Y237 131 aaKnown RBP7.88□□□□□ -1.15
TRAV27-201ENST00000390457 PCDHB2Q9Y5E7 798 aa7.88□□□□□ -1.15
TRAV27-201ENST00000390457 SNX14Q9Y5W7 946 aa7.88□□□□□ -1.15
TRAV27-201ENST00000390457 FANCMQ8IYD8 2048 aa7.87□□□□□ -1.15
TRAV27-201ENST00000390457 EML1O00423 815 aa7.87□□□□□ -1.15
TRAV27-201ENST00000390457 NRP1O14786 923 aa7.87□□□□□ -1.15
TRAV27-201ENST00000390457 RPS6KB1P23443 525 aa7.87□□□□□ -1.15
TRAV27-201ENST00000390457 PDIA3P30101 505 aaKnown RBP7.87□□□□□ -1.15
TRAV27-201ENST00000390457 HSPA4P34932 840 aa7.87□□□□□ -1.15
TRAV27-201ENST00000390457 DNM2P50570 870 aa7.87□□□□□ -1.15
TRAV27-201ENST00000390457 NPEPPSP55786 919 aa7.87□□□□□ -1.15
TRAV27-201ENST00000390457 NBR1Q14596 966 aa7.87□□□□□ -1.15
TRAV27-201ENST00000390457 LETM2Q2VYF4 491 aa7.87□□□□□ -1.15
TRAV27-201ENST00000390457 KIAA0319Q5VV43 1072 aa7.87□□□□□ -1.15
TRAV27-201ENST00000390457 CCDC149Q6ZUS6 474 aa7.87□□□□□ -1.15
TRAV27-201ENST00000390457 TAS1R1Q7RTX1 841 aa7.87□□□□□ -1.15
TRAV27-201ENST00000390457 CATSPER4Q7RTX7 472 aa7.87□□□□□ -1.15
TRAV27-201ENST00000390457 RHPN2Q8IUC4 686 aa7.87□□□□□ -1.15
TRAV27-201ENST00000390457 CCDC148Q8NFR7 591 aa7.87□□□□□ -1.15
TRAV27-201ENST00000390457 NKD2Q969F2 451 aaPredicted RBP7.87□□□□□ -1.15
TRAV27-201ENST00000390457 ACSF2Q96CM8 615 aaPredicted RBP7.87□□□□□ -1.15
TRAV27-201ENST00000390457 SCLT1Q96NL6 688 aa7.87□□□□□ -1.15
TRAV27-201ENST00000390457 TMEM175Q9BSA9 504 aa7.87□□□□□ -1.15
TRAV27-201ENST00000390457 DHX33Q9H6R0 707 aaKnown RBP7.87□□□□□ -1.15
TRAV27-201ENST00000390457 RXFP1Q9HBX9 757 aa7.87□□□□□ -1.15
TRAV27-201ENST00000390457 WDR6Q9NNW5 1121 aaKnown RBP7.87□□□□□ -1.15
TRAV27-201ENST00000390457 KCNMB3Q9NPA1 279 aa7.87□□□□□ -1.15
TRAV27-201ENST00000390457 MARCH5Q9NX47 278 aa7.87□□□□□ -1.15
TRAV27-201ENST00000390457 IGSF9Q9P2J2 1179 aa7.87□□□□□ -1.15
TRAV27-201ENST00000390457 WRAP73Q9P2S5 460 aaPredicted RBP7.87□□□□□ -1.15
TRAV27-201ENST00000390457 STK39Q9UEW8 545 aa7.87□□□□□ -1.15
TRAV27-201ENST00000390457 SEPT9Q9UHD8 586 aaPredicted RBP7.87□□□□□ -1.15
TRAV27-201ENST00000390457 VAV3Q9UKW4 847 aa7.87□□□□□ -1.15
TRAV27-201ENST00000390457 INPP5FQ9Y2H2 1132 aa7.87□□□□□ -1.15
TRAV27-201ENST00000390457 CHD6Q8TD26 2715 aa7.87□□□□□ -1.15
TRAV27-201ENST00000390457 KMT2BQ9UMN6 2715 aaPredicted RBP7.87□□□□□ -1.15
TRAV27-201ENST00000390457 MTCL1Q9Y4B5 1905 aaKnown RBP7.86□□□□□ -1.15
TRAV27-201ENST00000390457 CNTNAP2Q9UHC6 1331 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms