RNA–Protein interactions for RNA: ENST00000389757.7

PKP4-201, Transcript of plakophilin 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PKP4, Length 5,777 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-201ENST00000389757 WDR72Q3MJ13 1102 aa10.99□□□□□ -0.65
PKP4-201ENST00000389757 EFCAB12Q6NXP0 572 aa10.99□□□□□ -0.65
PKP4-201ENST00000389757 SMYD2Q9NRG4 433 aa10.99□□□□□ -0.65
PKP4-201ENST00000389757 PPP1R9AQ9ULJ8 1098 aa10.99□□□□□ -0.65
PKP4-201ENST00000389757 AGAP1Q9UPQ3 857 aa10.99□□□□□ -0.65
PKP4-201ENST00000389757 ZNF500O60304 480 aaPredicted RBP10.99□□□□□ -0.65
PKP4-201ENST00000389757 HOXA10P31260 410 aaPredicted RBP10.99□□□□□ -0.65
PKP4-201ENST00000389757 NNMTP40261 264 aa10.99□□□□□ -0.65
PKP4-201ENST00000389757 SARM1Q6SZW1 724 aa10.99□□□□□ -0.65
PKP4-201ENST00000389757 GLB1LQ6UWU2 654 aa10.99□□□□□ -0.65
PKP4-201ENST00000389757 RAB44Q7Z6P3 723 aaPredicted RBP10.99□□□□□ -0.65
PKP4-201ENST00000389757 ARHGAP24Q8N264 748 aa10.99□□□□□ -0.65
PKP4-201ENST00000389757 PPFIBP2Q8ND30 876 aa10.99□□□□□ -0.65
PKP4-201ENST00000389757 ANKEF1Q9NU02 776 aa10.99□□□□□ -0.65
PKP4-201ENST00000389757 PRMT7Q9NVM4 692 aaPredicted RBP10.99□□□□□ -0.65
PKP4-201ENST00000389757 SLC16A3O15427 465 aaKnown RBP10.98□□□□□ -0.65
PKP4-201ENST00000389757 UPP2O95045 317 aa10.98□□□□□ -0.65
PKP4-201ENST00000389757 ZRANB2O95218 330 aaKnown RBP eCLIP10.98□□□□□ -0.653e-7■■■■□ 25.7
PKP4-201ENST00000389757 ITGA4P13612 1032 aa10.98□□□□□ -0.65
PKP4-201ENST00000389757 CALRP27797 417 aaKnown RBP10.98□□□□□ -0.65
PKP4-201ENST00000389757 APBA1Q02410 837 aa10.98□□□□□ -0.65
PKP4-201ENST00000389757 TMEM132DQ14C87 1099 aa10.98□□□□□ -0.65
PKP4-201ENST00000389757 LMBRD2Q68DH5 695 aaPredicted RBP10.98□□□□□ -0.65
PKP4-201ENST00000389757 GMCL1Q96IK5 515 aa10.98□□□□□ -0.65
PKP4-201ENST00000389757 HINFPQ9BQA5 517 aa10.98□□□□□ -0.65
PKP4-201ENST00000389757 GOLGA8KD6RF30 607 aa10.98□□□□□ -0.65
PKP4-201ENST00000389757 FOXN1O15353 648 aa10.98□□□□□ -0.65
PKP4-201ENST00000389757 APOEP02649 317 aa10.98□□□□□ -0.65
PKP4-201ENST00000389757 VCAM1P19320 739 aa10.98□□□□□ -0.65
PKP4-201ENST00000389757 TCF7P36402 384 aaPredicted RBP10.98□□□□□ -0.65
PKP4-201ENST00000389757 NXNQ6DKJ4 435 aa10.98□□□□□ -0.65
PKP4-201ENST00000389757 CYP4F22Q6NT55 531 aa10.98□□□□□ -0.65
PKP4-201ENST00000389757 GMCL1P1Q8NEA9 526 aa10.98□□□□□ -0.65
PKP4-201ENST00000389757 PRPF31Q8WWY3 499 aaKnown RBP10.98□□□□□ -0.65
PKP4-201ENST00000389757 RABGGTAQ92696 567 aa10.98□□□□□ -0.65
PKP4-201ENST00000389757 C7orf25Q9BPX7 421 aa10.98□□□□□ -0.65
PKP4-201ENST00000389757 EPB41L5Q9HCM4 733 aa10.98□□□□□ -0.65
PKP4-201ENST00000389757 POLR1AO95602 1720 aaPredicted RBP10.98□□□□□ -0.65
PKP4-201ENST00000389757 SART1O43290 800 aaKnown RBP10.98□□□□□ -0.65
PKP4-201ENST00000389757 RALAP11233 206 aa10.98□□□□□ -0.65
PKP4-201ENST00000389757 RPA1P27694 616 aa10.98□□□□□ -0.65
PKP4-201ENST00000389757 BTBD8Q5XKL5 378 aa10.98□□□□□ -0.65
PKP4-201ENST00000389757 SPATA24Q86W54 205 aa10.98□□□□□ -0.65
PKP4-201ENST00000389757 SAMD3Q8N6K7 520 aa10.98□□□□□ -0.65
PKP4-201ENST00000389757 ABHD10Q9NUJ1 306 aa10.98□□□□□ -0.65
PKP4-201ENST00000389757 REREQ9P2R6 1566 aa10.98□□□□□ -0.65
PKP4-201ENST00000389757 PPARGP37231 505 aaPredicted RBP10.98□□□□□ -0.65
PKP4-201ENST00000389757 ACOT2P49753 483 aa10.98□□□□□ -0.65
PKP4-201ENST00000389757 ZNF746Q6NUN9 644 aaPredicted RBP10.98□□□□□ -0.65
PKP4-201ENST00000389757 SPATA2LQ8IUW3 424 aaPredicted RBP10.98□□□□□ -0.65
PKP4-201ENST00000389757 TTC13Q8NBP0 860 aa10.98□□□□□ -0.65
PKP4-201ENST00000389757 DPF2Q92785 391 aa10.98□□□□□ -0.65
PKP4-201ENST00000389757 HDAC11Q96DB2 347 aa10.98□□□□□ -0.65
PKP4-201ENST00000389757 RRAGDQ9NQL2 400 aaPredicted RBP10.98□□□□□ -0.65
PKP4-201ENST00000389757 SLC38A7Q9NVC3 462 aa10.98□□□□□ -0.65
PKP4-201ENST00000389757 OAS2P29728 719 aaKnown RBP10.97□□□□□ -0.65
PKP4-201ENST00000389757 LRRC71Q8N4P6 559 aa10.97□□□□□ -0.65
PKP4-201ENST00000389757 APPL2Q8NEU8 664 aa10.97□□□□□ -0.65
PKP4-201ENST00000389757 C17orf102A2RUQ5 167 aa10.97□□□□□ -0.65
PKP4-201ENST00000389757 FHDC1Q9C0D6 1143 aaPredicted RBP10.97□□□□□ -0.65
PKP4-201ENST00000389757 RABEP2Q9H5N1 569 aa10.97□□□□□ -0.65
PKP4-201ENST00000389757 DIS3Q9Y2L1 958 aaKnown RBP10.97□□□□□ -0.65
PKP4-201ENST00000389757 SNX9Q9Y5X1 595 aa10.97□□□□□ -0.65
PKP4-201ENST00000389757 WNT10BO00744 389 aa10.97□□□□□ -0.65
PKP4-201ENST00000389757 CD4P01730 458 aa10.97□□□□□ -0.65
PKP4-201ENST00000389757 MSH2P43246 934 aa10.97□□□□□ -0.65
PKP4-201ENST00000389757 TRIP13Q15645 432 aaPredicted RBP10.97□□□□□ -0.65
PKP4-201ENST00000389757 ANKRD40Q6AI12 368 aa10.97□□□□□ -0.65
PKP4-201ENST00000389757 CFAP57Q96MR6 1250 aa10.97□□□□□ -0.65
PKP4-201ENST00000389757 KLHL8Q9P2G9 620 aaPredicted RBP10.97□□□□□ -0.65
PKP4-201ENST00000389757 MANSC4A6NHS7 340 aaPredicted RBP10.97□□□□□ -0.65
PKP4-201ENST00000389757 CXCL11O14625 94 aa10.97□□□□□ -0.65
PKP4-201ENST00000389757 MYBL1P10243 752 aa10.97□□□□□ -0.65
PKP4-201ENST00000389757 PMLP29590 882 aa10.97□□□□□ -0.65
PKP4-201ENST00000389757 KPNA2P52292 529 aaKnown RBP10.97□□□□□ -0.65
PKP4-201ENST00000389757 ACTR2P61160 394 aa10.97□□□□□ -0.65
PKP4-201ENST00000389757 ATF7IP2Q5U623 682 aa10.97□□□□□ -0.65
PKP4-201ENST00000389757 PDIK1LQ8N165 341 aa10.97□□□□□ -0.65
PKP4-201ENST00000389757 DAGLBQ8NCG7 672 aa10.97□□□□□ -0.65
PKP4-201ENST00000389757 MCUQ8NE86 351 aa10.97□□□□□ -0.65
PKP4-201ENST00000389757 ATP6V1E2Q96A05 226 aa10.97□□□□□ -0.65
PKP4-201ENST00000389757 AKT1S1Q96B36 256 aa10.97□□□□□ -0.65
PKP4-201ENST00000389757 CPA4Q9UI42 421 aa10.97□□□□□ -0.65
PKP4-201ENST00000389757 TLK1Q9UKI8 766 aa10.97□□□□□ -0.65
PKP4-201ENST00000389757 FXR2P51116 673 aaKnown RBP eCLIP10.97□□□□□ -0.657e-7■■■□□ 16
PKP4-201ENST00000389757 DR1Q01658 176 aa10.97□□□□□ -0.65
PKP4-201ENST00000389757 BBS9Q3SYG4 887 aa10.97□□□□□ -0.65
PKP4-201ENST00000389757 EFHC2Q5JST6 749 aa10.97□□□□□ -0.65
PKP4-201ENST00000389757 FAM102AQ5T9C2 384 aaPredicted RBP10.97□□□□□ -0.65
PKP4-201ENST00000389757 NUDCD1Q96RS6 583 aa10.97□□□□□ -0.65
PKP4-201ENST00000389757 ARHGEF28Q8N1W1 1705 aaKnown RBP10.96□□□□□ -0.65
PKP4-201ENST00000389757 KIF1AQ12756 1690 aa10.96□□□□□ -0.65
PKP4-201ENST00000389757 CASP7P55210 303 aa10.96□□□□□ -0.65
PKP4-201ENST00000389757 FAM117BQ6P1L5 589 aa10.96□□□□□ -0.65
PKP4-201ENST00000389757 MYLK4Q86YV6 388 aaPredicted RBP10.96□□□□□ -0.65
PKP4-201ENST00000389757 GLIS2Q9BZE0 524 aaPredicted RBP10.96□□□□□ -0.65
PKP4-201ENST00000389757 KLC2Q9H0B6 622 aa10.96□□□□□ -0.65
PKP4-201ENST00000389757 IP6K2Q9UHH9 426 aa10.96□□□□□ -0.65
PKP4-201ENST00000389757 TAF6LQ9Y6J9 622 aa10.96□□□□□ -0.65
PKP4-201ENST00000389757 KIF20BQ96Q89 1820 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms