RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 CARD9Q9H257 536 aa14.04□□□□□ -0.16
TRAPPC9-201ENST00000389328 KDM4CQ9H3R0 1056 aa14.04□□□□□ -0.16
TRAPPC9-201ENST00000389328 KIF9Q9HAQ2 790 aa14.04□□□□□ -0.16
TRAPPC9-201ENST00000389328 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.04□□□□□ -0.168e-7■■■■■ 45.8
TRAPPC9-201ENST00000389328 APEX2Q9UBZ4 518 aa14.04□□□□□ -0.16
TRAPPC9-201ENST00000389328 MEGF6O75095 1541 aa14.04□□□□□ -0.16
TRAPPC9-201ENST00000389328 TMEM253P0C7T8 217 aa14.04□□□□□ -0.16
TRAPPC9-201ENST00000389328 IFI35P80217 286 aaPredicted RBP14.04□□□□□ -0.16
TRAPPC9-201ENST00000389328 CLEC4GQ6UXB4 293 aa14.04□□□□□ -0.16
TRAPPC9-201ENST00000389328 BRINP3Q76B58 766 aa14.04□□□□□ -0.16
TRAPPC9-201ENST00000389328 TMC3Q7Z5M5 1100 aa14.04□□□□□ -0.16
TRAPPC9-201ENST00000389328 ZBED8Q8IZ13 594 aa14.04□□□□□ -0.16
TRAPPC9-201ENST00000389328 SMC1BQ8NDV3 1235 aa14.04□□□□□ -0.16
TRAPPC9-201ENST00000389328 ATP2A3Q93084 1043 aa14.04□□□□□ -0.16
TRAPPC9-201ENST00000389328 TRIM11Q96F44 468 aa14.04□□□□□ -0.16
TRAPPC9-201ENST00000389328 SH2D3AQ9BRG2 576 aa14.04□□□□□ -0.16
TRAPPC9-201ENST00000389328 MRPL47Q9HD33 250 aaKnown RBP14.04□□□□□ -0.16
TRAPPC9-201ENST00000389328 DLG5Q8TDM6 1919 aa14.04□□□□□ -0.16
TRAPPC9-201ENST00000389328 CDH16O75309 829 aa14.04□□□□□ -0.16
TRAPPC9-201ENST00000389328 DNAJC3Q13217 504 aa14.04□□□□□ -0.16
TRAPPC9-201ENST00000389328 LRRC23Q53EV4 343 aaPredicted RBP14.04□□□□□ -0.16
TRAPPC9-201ENST00000389328 DEPTORQ8TB45 409 aa14.04□□□□□ -0.16
TRAPPC9-201ENST00000389328 PPP4R1Q8TF05 950 aa14.04□□□□□ -0.16
TRAPPC9-201ENST00000389328 CD209Q9NNX6 404 aa14.04□□□□□ -0.16
TRAPPC9-201ENST00000389328 ADAM22Q9P0K1 906 aa14.04□□□□□ -0.16
TRAPPC9-201ENST00000389328 ZNF263O14978 683 aa14.04□□□□□ -0.16
TRAPPC9-201ENST00000389328 SSTR3P32745 418 aaPredicted RBP14.04□□□□□ -0.16
TRAPPC9-201ENST00000389328 AP3B2Q13367 1082 aa14.04□□□□□ -0.16
TRAPPC9-201ENST00000389328 EP400NLQ6ZTU2 488 aa14.04□□□□□ -0.16
TRAPPC9-201ENST00000389328 TRMT10CQ7L0Y3 403 aaKnown RBP14.04□□□□□ -0.16
TRAPPC9-201ENST00000389328 RFX6Q8HWS3 928 aa14.04□□□□□ -0.16
TRAPPC9-201ENST00000389328 GSDMBQ8TAX9 411 aa14.04□□□□□ -0.16
TRAPPC9-201ENST00000389328 GRAMD1AQ96CP6 724 aa14.04□□□□□ -0.16
TRAPPC9-201ENST00000389328 NUDT12Q9BQG2 462 aa14.04□□□□□ -0.16
TRAPPC9-201ENST00000389328 KMT5AQ9NQR1 393 aa14.04□□□□□ -0.16
TRAPPC9-201ENST00000389328 ANKRD26Q9UPS8 1709 aa14.03□□□□□ -0.16
TRAPPC9-201ENST00000389328 GPS1Q13098 491 aa14.03□□□□□ -0.16
TRAPPC9-201ENST00000389328 MTM1Q13496 603 aa14.03□□□□□ -0.16
TRAPPC9-201ENST00000389328 DAGLBQ8NCG7 672 aa14.03□□□□□ -0.16
TRAPPC9-201ENST00000389328 FAM20AQ96MK3 541 aa14.03□□□□□ -0.16
TRAPPC9-201ENST00000389328 FAM161BQ96MY7 647 aa14.03□□□□□ -0.16
TRAPPC9-201ENST00000389328 TRPC6Q9Y210 931 aa14.03□□□□□ -0.16
TRAPPC9-201ENST00000389328 ABCB11O95342 1321 aa14.03□□□□□ -0.16
TRAPPC9-201ENST00000389328 PITPNM2Q9BZ72 1349 aa14.03□□□□□ -0.16
TRAPPC9-201ENST00000389328 PJA2O43164 708 aa14.03□□□□□ -0.16
TRAPPC9-201ENST00000389328 LMNAP02545 664 aaKnown RBP14.03□□□□□ -0.16
TRAPPC9-201ENST00000389328 MYBL1P10243 752 aa14.03□□□□□ -0.16
TRAPPC9-201ENST00000389328 CYP11B2P19099 503 aa14.03□□□□□ -0.16
TRAPPC9-201ENST00000389328 MKRN3Q13064 507 aaKnown RBP14.03□□□□□ -0.16
TRAPPC9-201ENST00000389328 SLC30A9Q6PML9 568 aa14.03□□□□□ -0.16
TRAPPC9-201ENST00000389328 IQCKQ8N0W5 287 aa14.03□□□□□ -0.16
TRAPPC9-201ENST00000389328 PDIK1LQ8N165 341 aa14.03□□□□□ -0.16
TRAPPC9-201ENST00000389328 ZBTB10Q96DT7 871 aa14.03□□□□□ -0.16
TRAPPC9-201ENST00000389328 CALN1Q9BXU9 219 aa14.03□□□□□ -0.16
TRAPPC9-201ENST00000389328 TRABDQ9H4I3 376 aa14.03□□□□□ -0.16
TRAPPC9-201ENST00000389328 PFASO15067 1338 aa14.03□□□□□ -0.16
TRAPPC9-201ENST00000389328 LRRIQ4A6NIV6 560 aa14.03□□□□□ -0.16
TRAPPC9-201ENST00000389328 FAM182BQ5T319 152 aa14.03□□□□□ -0.16
TRAPPC9-201ENST00000389328 APTXQ7Z2E3 356 aaKnown RBP14.03□□□□□ -0.16
TRAPPC9-201ENST00000389328 TUBB6Q9BUF5 446 aa14.03□□□□□ -0.16
TRAPPC9-201ENST00000389328 UBXN6Q9BZV1 441 aa14.03□□□□□ -0.16
TRAPPC9-201ENST00000389328 NPHS2Q9NP85 383 aa14.03□□□□□ -0.16
TRAPPC9-201ENST00000389328 MTMR4Q9NYA4 1195 aa14.03□□□□□ -0.16
TRAPPC9-201ENST00000389328 ANGPTL2Q9UKU9 493 aa14.03□□□□□ -0.16
TRAPPC9-201ENST00000389328 PALM3A6NDB9 673 aaPredicted RBP14.02□□□□□ -0.16
TRAPPC9-201ENST00000389328 KITP10721 976 aa14.02□□□□□ -0.16
TRAPPC9-201ENST00000389328 CD58P19256 250 aa14.02□□□□□ -0.16
TRAPPC9-201ENST00000389328 TARSP26639 723 aaKnown RBP14.02□□□□□ -0.16
TRAPPC9-201ENST00000389328 ARFIP2P53365 341 aa14.02□□□□□ -0.16
TRAPPC9-201ENST00000389328 CAV1Q03135 178 aa14.02□□□□□ -0.16
TRAPPC9-201ENST00000389328 KLC1Q07866 573 aa14.02□□□□□ -0.16
TRAPPC9-201ENST00000389328 DNAJC24Q6P3W2 148 aa14.02□□□□□ -0.16
TRAPPC9-201ENST00000389328 SH3GL2Q99962 352 aa14.02□□□□□ -0.16
TRAPPC9-201ENST00000389328 RSPH10B2B2RC85 870 aa14.02□□□□□ -0.16
TRAPPC9-201ENST00000389328 TCP10L2B9ZVM9 353 aa14.02□□□□□ -0.16
TRAPPC9-201ENST00000389328 RSPH10BP0C881 870 aa14.02□□□□□ -0.16
TRAPPC9-201ENST00000389328 PDIA2Q13087 525 aaKnown RBP14.02□□□□□ -0.16
TRAPPC9-201ENST00000389328 GRAPQ13588 217 aa14.02□□□□□ -0.16
TRAPPC9-201ENST00000389328 TMEM154Q6P9G4 183 aa14.02□□□□□ -0.16
TRAPPC9-201ENST00000389328 PADI6Q6TGC4 694 aa14.02□□□□□ -0.16
TRAPPC9-201ENST00000389328 GRAPLQ8TC17 118 aaPredicted RBP14.02□□□□□ -0.16
TRAPPC9-201ENST00000389328 SCFD1Q8WVM8 642 aa14.02□□□□□ -0.16
TRAPPC9-201ENST00000389328 RBM15Q96T37 977 aaKnown RBP eCLIP14.02□□□□□ -0.162e-6■■■■■ 33.2
TRAPPC9-201ENST00000389328 ATP6V0A4Q9HBG4 840 aa14.02□□□□□ -0.16
TRAPPC9-201ENST00000389328 CCPG1Q9ULG6 757 aa14.02□□□□□ -0.16
TRAPPC9-201ENST00000389328 SLC16A4O15374 487 aa14.02□□□□□ -0.17
TRAPPC9-201ENST00000389328 TOM1L1O75674 476 aa14.02□□□□□ -0.17
TRAPPC9-201ENST00000389328 RNF8O76064 485 aa14.02□□□□□ -0.17
TRAPPC9-201ENST00000389328 GGPS1O95749 300 aa14.02□□□□□ -0.17
TRAPPC9-201ENST00000389328 TMPRSS15P98073 1019 aa14.02□□□□□ -0.17
TRAPPC9-201ENST00000389328 GRAMD1BQ3KR37 738 aa14.02□□□□□ -0.17
TRAPPC9-201ENST00000389328 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.02□□□□□ -0.17
TRAPPC9-201ENST00000389328 COL23A1Q86Y22 540 aaPredicted RBP14.02□□□□□ -0.17
TRAPPC9-201ENST00000389328 SLC17A8Q8NDX2 589 aa14.02□□□□□ -0.17
TRAPPC9-201ENST00000389328 BTBD6Q96KE9 485 aa14.02□□□□□ -0.17
TRAPPC9-201ENST00000389328 IFT122Q9HBG6 1241 aa14.02□□□□□ -0.17
TRAPPC9-201ENST00000389328 KLHL11Q9NVR0 708 aa14.02□□□□□ -0.17
TRAPPC9-201ENST00000389328 WTIPA6NIX2 430 aaPredicted RBP14.02□□□□□ -0.17
TRAPPC9-201ENST00000389328 ANXA13P27216 316 aa14.02□□□□□ -0.17
TRAPPC9-201ENST00000389328 KRT81Q14533 505 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms