RNA–Protein interactions for RNA: ENST00000388090.1

SNORA40-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 126 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40-201ENST00000388090 FOXB1Q99853 325 aa2.34□□□□□ -2.03
SNORA40-201ENST00000388090 ARHGEF4Q9NR80 690 aa2.34□□□□□ -2.03
SNORA40-201ENST00000388090 ACTR10Q9NZ32 417 aa2.34□□□□□ -2.03
SNORA40-201ENST00000388090 STRIP2Q9ULQ0 834 aa2.34□□□□□ -2.03
SNORA40-201ENST00000388090 GTF3C3Q9Y5Q9 886 aa2.34□□□□□ -2.03
SNORA40-201ENST00000388090 ZNF804BA4D1E1 1349 aa2.34□□□□□ -2.04
SNORA40-201ENST00000388090 DIRC3C9JPN6 131 aa2.33□□□□□ -2.04
SNORA40-201ENST00000388090 H3BNC9 293 aa2.33□□□□□ -2.04
SNORA40-201ENST00000388090 HNRNPLP14866 589 aaKnown RBP eCLIP2.33□□□□□ -2.04
SNORA40-201ENST00000388090 FDXRP22570 491 aa2.33□□□□□ -2.04
SNORA40-201ENST00000388090 RGS3P49796 1198 aa2.33□□□□□ -2.04
SNORA40-201ENST00000388090 NHLH2Q02577 135 aa2.33□□□□□ -2.04
SNORA40-201ENST00000388090 EIF2B5Q13144 721 aaKnown RBP2.33□□□□□ -2.04
SNORA40-201ENST00000388090 SRSF7Q16629 238 aaKnown RBP eCLIP2.33□□□□□ -2.04
SNORA40-201ENST00000388090 NSMFQ6X4W1 530 aa2.33□□□□□ -2.04
SNORA40-201ENST00000388090 Q6ZNX1 250 aa2.33□□□□□ -2.04
SNORA40-201ENST00000388090 DOK3Q7L591 496 aa2.33□□□□□ -2.04
SNORA40-201ENST00000388090 PTF1AQ7RTS3 328 aa2.33□□□□□ -2.04
SNORA40-201ENST00000388090 GPRIN1Q7Z2K8 1008 aa2.33□□□□□ -2.04
SNORA40-201ENST00000388090 TECPR1Q7Z6L1 1165 aa2.33□□□□□ -2.04
SNORA40-201ENST00000388090 DYDC2Q96IM9 177 aa2.33□□□□□ -2.04
SNORA40-201ENST00000388090 Q96MF0 132 aa2.33□□□□□ -2.04
SNORA40-201ENST00000388090 AARSD1Q9BTE6 412 aaKnown RBP2.33□□□□□ -2.04
SNORA40-201ENST00000388090 TRAIPQ9BWF2 469 aa2.33□□□□□ -2.04
SNORA40-201ENST00000388090 ACSS2Q9NR19 701 aa2.33□□□□□ -2.04
SNORA40-201ENST00000388090 ASB6Q9NWX5 421 aa2.33□□□□□ -2.04
SNORA40-201ENST00000388090 SLC17A6Q9P2U8 582 aa2.33□□□□□ -2.04
SNORA40-201ENST00000388090 DNAI1Q9UI46 699 aa2.33□□□□□ -2.04
SNORA40-201ENST00000388090 MAP3K2Q9Y2U5 619 aa2.33□□□□□ -2.04
SNORA40-201ENST00000388090 PCDHA8Q9Y5H6 950 aa2.33□□□□□ -2.04
SNORA40-201ENST00000388090 B3GALT1Q9Y5Z6 326 aa2.33□□□□□ -2.04
SNORA40-201ENST00000388090 OBSCNQ5VST9 7968 aa2.33□□□□□ -2.04
SNORA40-201ENST00000388090 CACNA1IQ9P0X4 2223 aa2.33□□□□□ -2.04
SNORA40-201ENST00000388090 SERINC4A6NH21 518 aa2.32□□□□□ -2.04
SNORA40-201ENST00000388090 ARVCFO00192 962 aa2.32□□□□□ -2.04
SNORA40-201ENST00000388090 GJB6O95452 261 aa2.32□□□□□ -2.04
SNORA40-201ENST00000388090 ITPKBP27987 946 aa2.32□□□□□ -2.04
SNORA40-201ENST00000388090 RESTQ13127 1097 aa2.32□□□□□ -2.04
SNORA40-201ENST00000388090 RAPGEF1Q13905 1077 aa2.32□□□□□ -2.04
SNORA40-201ENST00000388090 DDB1Q16531 1140 aa2.32□□□□□ -2.04
SNORA40-201ENST00000388090 GPR149Q86SP6 731 aa2.32□□□□□ -2.04
SNORA40-201ENST00000388090 ZBTB8BQ8NAP8 495 aaPredicted RBP2.32□□□□□ -2.04
SNORA40-201ENST00000388090 ERCC4Q92889 916 aaPredicted RBP2.32□□□□□ -2.04
SNORA40-201ENST00000388090 SGSM3Q96HU1 749 aa2.32□□□□□ -2.04
SNORA40-201ENST00000388090 POLR3BQ9NW08 1133 aaPredicted RBP2.32□□□□□ -2.04
SNORA40-201ENST00000388090 KCMF1Q9P0J7 381 aa2.32□□□□□ -2.04
SNORA40-201ENST00000388090 ZNF521Q96K83 1311 aa2.32□□□□□ -2.04
SNORA40-201ENST00000388090 CCDC187A0A096LP49 1063 aa2.31□□□□□ -2.04
SNORA40-201ENST00000388090 CCDC66A2RUB6 948 aa2.31□□□□□ -2.04
SNORA40-201ENST00000388090 MANSC4A6NHS7 340 aaPredicted RBP2.31□□□□□ -2.04
SNORA40-201ENST00000388090 DAPK3O43293 454 aa2.31□□□□□ -2.04
SNORA40-201ENST00000388090 PRLP01236 227 aa2.31□□□□□ -2.04
SNORA40-201ENST00000388090 HLA-DOAP06340 250 aa2.31□□□□□ -2.04
SNORA40-201ENST00000388090 SRGAP2CP0DJJ0 459 aa2.31□□□□□ -2.04
SNORA40-201ENST00000388090 CCT4P50991 539 aaKnown RBP2.31□□□□□ -2.04
SNORA40-201ENST00000388090 IFRD2Q12894 506 aaPredicted RBP2.31□□□□□ -2.04
SNORA40-201ENST00000388090 MRPL49Q13405 166 aaKnown RBP2.31□□□□□ -2.04
SNORA40-201ENST00000388090 KLF9Q13886 244 aaPredicted RBP2.31□□□□□ -2.04
SNORA40-201ENST00000388090 FXNQ16595 210 aa2.31□□□□□ -2.04
SNORA40-201ENST00000388090 MTX3Q5HYI7 312 aa2.31□□□□□ -2.04
SNORA40-201ENST00000388090 YOD1Q5VVQ6 348 aaPredicted RBP2.31□□□□□ -2.04
SNORA40-201ENST00000388090 AWAT2Q6E213 333 aa2.31□□□□□ -2.04
SNORA40-201ENST00000388090 DPH6Q7L8W6 267 aa2.31□□□□□ -2.04
SNORA40-201ENST00000388090 MTDHQ86UE4 582 aaKnown RBP2.31□□□□□ -2.04
SNORA40-201ENST00000388090 METTL16Q86W50 562 aaKnown RBP2.31□□□□□ -2.04
SNORA40-201ENST00000388090 SMRP1Q8NCR6 262 aa2.31□□□□□ -2.04
SNORA40-201ENST00000388090 IL17RBQ9NRM6 502 aa2.31□□□□□ -2.04
SNORA40-201ENST00000388090 RNF181Q9P0P0 153 aa2.31□□□□□ -2.04
SNORA40-201ENST00000388090 AQP7O14520 342 aa2.3□□□□□ -2.04
SNORA40-201ENST00000388090 GSTA4O15217 222 aa2.3□□□□□ -2.04
SNORA40-201ENST00000388090 MOSPD3O75425 235 aa2.3□□□□□ -2.04
SNORA40-201ENST00000388090 WNT3AP56704 352 aa2.3□□□□□ -2.04
SNORA40-201ENST00000388090 SLC6A3Q01959 620 aa2.3□□□□□ -2.04
SNORA40-201ENST00000388090 TMEM132BQ14DG7 1078 aa2.3□□□□□ -2.04
SNORA40-201ENST00000388090 ETFDHQ16134 617 aa2.3□□□□□ -2.04
SNORA40-201ENST00000388090 METRNLQ641Q3 311 aa2.3□□□□□ -2.04
SNORA40-201ENST00000388090 DRICH1Q6PGQ1 229 aaPredicted RBP2.3□□□□□ -2.04
SNORA40-201ENST00000388090 USP43Q70EL4 1123 aa2.3□□□□□ -2.04
SNORA40-201ENST00000388090 XYLT1Q86Y38 959 aa2.3□□□□□ -2.04
SNORA40-201ENST00000388090 SAMD14Q8IZD0 417 aaPredicted RBP2.3□□□□□ -2.04
SNORA40-201ENST00000388090 ADAMTS15Q8TE58 950 aa2.3□□□□□ -2.04
SNORA40-201ENST00000388090 HASPINQ8TF76 798 aa2.3□□□□□ -2.04
SNORA40-201ENST00000388090 FUBP1Q96AE4 644 aaKnown RBP2.3□□□□□ -2.04
SNORA40-201ENST00000388090 UROC1Q96N76 676 aa2.3□□□□□ -2.04
SNORA40-201ENST00000388090 BCL11AQ9H165 835 aa2.3□□□□□ -2.04
SNORA40-201ENST00000388090 EPC1Q9H2F5 836 aa2.3□□□□□ -2.04
SNORA40-201ENST00000388090 ING3Q9NXR8 418 aa2.3□□□□□ -2.04
SNORA40-201ENST00000388090 FPGT-TNNI3KV9GXZ4 949 aa2.3□□□□□ -2.04
SNORA40-201ENST00000388090 NRP1O14786 923 aa2.29□□□□□ -2.04
SNORA40-201ENST00000388090 CDKL5O76039 1030 aa2.29□□□□□ -2.04
SNORA40-201ENST00000388090 FOSP01100 380 aaPredicted RBP2.29□□□□□ -2.04
SNORA40-201ENST00000388090 CFIP05156 583 aa2.29□□□□□ -2.04
SNORA40-201ENST00000388090 CASRP41180 1078 aa2.29□□□□□ -2.04
SNORA40-201ENST00000388090 DNM2P50570 870 aa2.29□□□□□ -2.04
SNORA40-201ENST00000388090 MRPS35P82673 323 aaKnown RBP2.29□□□□□ -2.04
SNORA40-201ENST00000388090 ROM1Q03395 351 aa2.29□□□□□ -2.04
SNORA40-201ENST00000388090 TNNI3KQ59H18 835 aa2.29□□□□□ -2.04
SNORA40-201ENST00000388090 FAM47CQ5HY64 1035 aa2.29□□□□□ -2.04
SNORA40-201ENST00000388090 FAM102AQ5T9C2 384 aaPredicted RBP2.29□□□□□ -2.04
SNORA40-201ENST00000388090 ZNF626Q68DY1 528 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms