RNA–Protein interactions for RNA: ENST00000382519.8

CD9-204, Transcript of CD9 molecule, humanhuman

TSL 2

Gene CD9, Length 800 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-204ENST00000382519 CA8P35219 290 aa20.21■□□□□ 0.83
CD9-204ENST00000382519 CCT6AP40227 531 aaKnown RBP20.21■□□□□ 0.83
CD9-204ENST00000382519 TOB1P50616 345 aaPredicted RBP20.21■□□□□ 0.83
CD9-204ENST00000382519 FXR2P51116 673 aaKnown RBP eCLIP20.21■□□□□ 0.83
CD9-204ENST00000382519 SMAD4Q13485 552 aaKnown RBP20.21■□□□□ 0.83
CD9-204ENST00000382519 PCBP1Q15365 356 aaKnown RBP eCLIP20.21■□□□□ 0.83
CD9-204ENST00000382519 NOTUMQ6P988 496 aa20.21■□□□□ 0.83
CD9-204ENST00000382519 TMC7Q7Z402 723 aa20.21■□□□□ 0.83
CD9-204ENST00000382519 IFNLR1Q8IU57 520 aaPredicted RBP20.21■□□□□ 0.83
CD9-204ENST00000382519 GJD3Q8N144 294 aa20.21■□□□□ 0.83
CD9-204ENST00000382519 MCPH1Q8NEM0 835 aa20.21■□□□□ 0.83
CD9-204ENST00000382519 TMEM169Q96HH4 297 aa20.21■□□□□ 0.83
CD9-204ENST00000382519 RSAD1Q9HA92 442 aa20.21■□□□□ 0.83
CD9-204ENST00000382519 CD320Q9NPF0 282 aa20.21■□□□□ 0.83
CD9-204ENST00000382519 LRWD1Q9UFC0 647 aa20.21■□□□□ 0.83
CD9-204ENST00000382519 TDRD15B5MCY1 1934 aaKnown RBP20.21■□□□□ 0.83
CD9-204ENST00000382519 CNTNAP2Q9UHC6 1331 aa20.21■□□□□ 0.83
CD9-204ENST00000382519 MUC3AQ02505 3323 aa20.2■□□□□ 0.82
CD9-204ENST00000382519 H3BQV1 296 aa20.2■□□□□ 0.82
CD9-204ENST00000382519 MBTPS2O43462 519 aa20.2■□□□□ 0.82
CD9-204ENST00000382519 GLP2RO95838 553 aa20.2■□□□□ 0.82
CD9-204ENST00000382519 MCM2P49736 904 aa20.2■□□□□ 0.82
CD9-204ENST00000382519 POU5F1BQ06416 359 aa20.2■□□□□ 0.82
CD9-204ENST00000382519 PTGDRQ13258 359 aa20.2■□□□□ 0.82
CD9-204ENST00000382519 DUSP6Q16828 381 aa20.2■□□□□ 0.82
CD9-204ENST00000382519 PADI6Q6TGC4 694 aa20.2■□□□□ 0.82
CD9-204ENST00000382519 AGMOQ6ZNB7 445 aa20.2■□□□□ 0.82
CD9-204ENST00000382519 MRPL10Q7Z7H8 261 aaKnown RBP20.2■□□□□ 0.82
CD9-204ENST00000382519 C4orf32Q8N8J7 132 aa20.2■□□□□ 0.82
CD9-204ENST00000382519 CCDC51Q96ER9 411 aa20.2■□□□□ 0.82
CD9-204ENST00000382519 CDCA3Q99618 268 aaPredicted RBP20.2■□□□□ 0.82
CD9-204ENST00000382519 EIF2AQ9BY44 585 aaKnown RBP20.2■□□□□ 0.82
CD9-204ENST00000382519 RAB34Q9BZG1 259 aa20.2■□□□□ 0.82
CD9-204ENST00000382519 NRDE2Q9H7Z3 1164 aa20.2■□□□□ 0.82
CD9-204ENST00000382519 NGRNQ9NPE2 291 aaKnown RBP20.2■□□□□ 0.82
CD9-204ENST00000382519 FSD2A1L4K1 749 aa20.19■□□□□ 0.82
CD9-204ENST00000382519 ITGA4P13612 1032 aa20.19■□□□□ 0.82
CD9-204ENST00000382519 NCLP19338 710 aaKnown RBP20.19■□□□□ 0.82
CD9-204ENST00000382519 RBM10P98175 930 aaKnown RBP20.19■□□□□ 0.82
CD9-204ENST00000382519 CNNM3Q8NE01 707 aa20.19■□□□□ 0.82
CD9-204ENST00000382519 SNX29Q8TEQ0 813 aa20.19■□□□□ 0.82
CD9-204ENST00000382519 MSLNLQ96KJ4 702 aa20.19■□□□□ 0.82
CD9-204ENST00000382519 NFKBIZQ9BYH8 718 aa20.19■□□□□ 0.82
CD9-204ENST00000382519 TRIM6Q9C030 488 aaPredicted RBP20.19■□□□□ 0.82
CD9-204ENST00000382519 CLEC1BQ9P126 229 aa20.19■□□□□ 0.82
CD9-204ENST00000382519 DNAJB4Q9UDY4 337 aa20.19■□□□□ 0.82
CD9-204ENST00000382519 SMC3Q9UQE7 1217 aa20.19■□□□□ 0.82
CD9-204ENST00000382519 IPPQ9Y573 584 aa20.19■□□□□ 0.82
CD9-204ENST00000382519 HIDE1A8MVS5 230 aa20.18■□□□□ 0.82
CD9-204ENST00000382519 B4GALT5O43286 388 aa20.18■□□□□ 0.82
CD9-204ENST00000382519 SRGAP2BP0DMP2 458 aa20.18■□□□□ 0.82
CD9-204ENST00000382519 ARF4P18085 180 aaPredicted RBP20.18■□□□□ 0.82
CD9-204ENST00000382519 MUTP22033 750 aa20.18■□□□□ 0.82
CD9-204ENST00000382519 ZP2Q05996 745 aa20.18■□□□□ 0.82
CD9-204ENST00000382519 SMC1AQ14683 1233 aaKnown RBP20.18■□□□□ 0.82
CD9-204ENST00000382519 SMAD2Q15796 467 aaKnown RBP20.18■□□□□ 0.82
CD9-204ENST00000382519 AMHR2Q16671 573 aa20.18■□□□□ 0.82
CD9-204ENST00000382519 TMEM173Q86WV6 379 aaPredicted RBP20.18■□□□□ 0.82
CD9-204ENST00000382519 ZBTB8OSQ8IWT0 167 aa20.18■□□□□ 0.82
CD9-204ENST00000382519 SMG8Q8ND04 991 aaKnown RBP20.18■□□□□ 0.82
CD9-204ENST00000382519 KHSRPQ92945 711 aaKnown RBP eCLIP20.18■□□□□ 0.82
CD9-204ENST00000382519 FAM193BQ96PV7 902 aaPredicted RBP20.18■□□□□ 0.82
CD9-204ENST00000382519 APOL6Q9BWW8 343 aa20.18■□□□□ 0.82
CD9-204ENST00000382519 CSRNP2Q9H175 543 aa20.18■□□□□ 0.82
CD9-204ENST00000382519 PRKAG3Q9UGI9 489 aa20.18■□□□□ 0.82
CD9-204ENST00000382519 CARNS1A5YM72 827 aa20.17■□□□□ 0.82
CD9-204ENST00000382519 LAD1O00515 517 aa20.17■□□□□ 0.82
CD9-204ENST00000382519 POMCP01189 267 aa20.17■□□□□ 0.82
CD9-204ENST00000382519 SLC11A1P49279 550 aa20.17■□□□□ 0.82
CD9-204ENST00000382519 AFF1P51825 1210 aaKnown RBP20.17■□□□□ 0.82
CD9-204ENST00000382519 ECM1Q16610 540 aa20.17■□□□□ 0.82
CD9-204ENST00000382519 RILPL1Q5EBL4 403 aa20.17■□□□□ 0.82
CD9-204ENST00000382519 LLGL2Q6P1M3 1020 aa20.17■□□□□ 0.82
CD9-204ENST00000382519 ZNF280BQ86YH2 543 aa20.17■□□□□ 0.82
CD9-204ENST00000382519 ADHFE1Q8IWW8 467 aa20.17■□□□□ 0.82
CD9-204ENST00000382519 VN1R2Q8NFZ6 395 aa20.17■□□□□ 0.82
CD9-204ENST00000382519 C1QTNF1Q9BXJ1 281 aa20.17■□□□□ 0.82
CD9-204ENST00000382519 EPHX3Q9H6B9 360 aa20.17■□□□□ 0.82
CD9-204ENST00000382519 UBN1Q9NPG3 1134 aa20.17■□□□□ 0.82
CD9-204ENST00000382519 DDX19AQ9NUU7 478 aaKnown RBP20.17■□□□□ 0.82
CD9-204ENST00000382519 KIAA1024Q9UPX6 916 aa20.17■□□□□ 0.82
CD9-204ENST00000382519 HES2Q9Y543 173 aa20.17■□□□□ 0.82
CD9-204ENST00000382519 B4GALT3O60512 393 aa20.16■□□□□ 0.82
CD9-204ENST00000382519 GALTP07902 379 aa20.16■□□□□ 0.82
CD9-204ENST00000382519 CYP11B2P19099 503 aa20.16■□□□□ 0.82
CD9-204ENST00000382519 MLH1P40692 756 aa20.16■□□□□ 0.82
CD9-204ENST00000382519 COASYQ13057 564 aa20.16■□□□□ 0.82
CD9-204ENST00000382519 PDIA5Q14554 519 aa20.16■□□□□ 0.82
CD9-204ENST00000382519 BMS1Q14692 1282 aaKnown RBP20.16■□□□□ 0.82
CD9-204ENST00000382519 TMEM132AQ24JP5 1023 aa20.16■□□□□ 0.82
CD9-204ENST00000382519 CDR2LQ86X02 465 aaPredicted RBP20.16■□□□□ 0.82
CD9-204ENST00000382519 HACE1Q8IYU2 909 aa20.16■□□□□ 0.82
CD9-204ENST00000382519 VPS52Q8N1B4 723 aa20.16■□□□□ 0.82
CD9-204ENST00000382519 IGSF22Q8N9C0 903 aa20.16■□□□□ 0.82
CD9-204ENST00000382519 SMRP1Q8NCR6 262 aa20.16■□□□□ 0.82
CD9-204ENST00000382519 BCL7CQ8WUZ0 217 aaPredicted RBP20.16■□□□□ 0.82
CD9-204ENST00000382519 BSNDQ8WZ55 320 aa20.16■□□□□ 0.82
CD9-204ENST00000382519 IGSF21Q96ID5 467 aa20.16■□□□□ 0.82
CD9-204ENST00000382519 BHMT2Q9H2M3 363 aa20.16■□□□□ 0.82
CD9-204ENST00000382519 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms