RNA–Protein interactions for RNA: ENST00000381272.5

SMC6-202, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 5

Gene SMC6, Length 1,803 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-202ENST00000381272 NSUN7Q8NE18 718 aaKnown RBP4.3□□□□□ -1.72
SMC6-202ENST00000381272 C8orf37Q96NL8 207 aa4.3□□□□□ -1.72
SMC6-202ENST00000381272 AARSD1Q9BTE6 412 aaKnown RBP4.3□□□□□ -1.72
SMC6-202ENST00000381272 KRTAP4-2Q9BYR5 136 aa4.3□□□□□ -1.72
SMC6-202ENST00000381272 CLSTN2Q9H4D0 955 aa4.3□□□□□ -1.72
SMC6-202ENST00000381272 LUC7LQ9NQ29 371 aaKnown RBP4.3□□□□□ -1.72
SMC6-202ENST00000381272 CWC25Q9NXE8 425 aaPredicted RBP4.3□□□□□ -1.72
SMC6-202ENST00000381272 NRBP1Q9UHY1 535 aa4.3□□□□□ -1.72
SMC6-202ENST00000381272 PKD1L3Q7Z443 1732 aa4.3□□□□□ -1.72
SMC6-202ENST00000381272 STRCP1A6NGW2 1772 aa4.3□□□□□ -1.72
SMC6-202ENST00000381272 MST1RQ04912 1400 aa4.3□□□□□ -1.72
SMC6-202ENST00000381272 LMTK3Q96Q04 1460 aa4.3□□□□□ -1.72
SMC6-202ENST00000381272 GLI3P10071 1580 aa4.3□□□□□ -1.72
SMC6-202ENST00000381272 A0A087WWV3 80 aa4.3□□□□□ -1.72
SMC6-202ENST00000381272 A0A1B0GUL7 405 aa4.3□□□□□ -1.72
SMC6-202ENST00000381272 PTPDC1A2A3K4 754 aa4.3□□□□□ -1.72
SMC6-202ENST00000381272 E7EWF7 191 aa4.3□□□□□ -1.72
SMC6-202ENST00000381272 DYNC1I1O14576 645 aa4.3□□□□□ -1.72
SMC6-202ENST00000381272 DLX3O60479 287 aa4.3□□□□□ -1.72
SMC6-202ENST00000381272 PFKFB2O60825 505 aa4.3□□□□□ -1.72
SMC6-202ENST00000381272 IFIT1P09914 478 aaKnown RBP4.3□□□□□ -1.72
SMC6-202ENST00000381272 CYP2C8P10632 490 aa4.3□□□□□ -1.72
SMC6-202ENST00000381272 HSPD1P10809 573 aaKnown RBP4.3□□□□□ -1.72
SMC6-202ENST00000381272 ADORA1P30542 326 aa4.3□□□□□ -1.72
SMC6-202ENST00000381272 EXOSC10Q01780 885 aaKnown RBP4.3□□□□□ -1.72
SMC6-202ENST00000381272 HSP90AB3PQ58FF7 597 aa4.3□□□□□ -1.72
SMC6-202ENST00000381272 TOM1L2Q6ZVM7 507 aa4.3□□□□□ -1.72
SMC6-202ENST00000381272 RAB11FIP4Q86YS3 637 aa4.3□□□□□ -1.72
SMC6-202ENST00000381272 CCAR1Q8IX12 1150 aaKnown RBP4.3□□□□□ -1.72
SMC6-202ENST00000381272 LRRC47Q8N1G4 583 aaKnown RBP4.3□□□□□ -1.72
SMC6-202ENST00000381272 MYRIPQ8NFW9 859 aa4.3□□□□□ -1.72
SMC6-202ENST00000381272 KIAA1524Q8TCG1 905 aa4.3□□□□□ -1.72
SMC6-202ENST00000381272 ZNF669Q96BR6 464 aaPredicted RBP4.3□□□□□ -1.72
SMC6-202ENST00000381272 PCDH18Q9HCL0 1135 aa4.3□□□□□ -1.72
SMC6-202ENST00000381272 HELLSQ9NRZ9 838 aa4.3□□□□□ -1.72
SMC6-202ENST00000381272 GPR27Q9NS67 375 aa4.3□□□□□ -1.72
SMC6-202ENST00000381272 DDX19AQ9NUU7 478 aaKnown RBP4.3□□□□□ -1.72
SMC6-202ENST00000381272 SPTLC3Q9NUV7 552 aa4.3□□□□□ -1.72
SMC6-202ENST00000381272 CLDND1Q9NY35 253 aa4.3□□□□□ -1.72
SMC6-202ENST00000381272 FBXL7Q9UJT9 491 aa4.3□□□□□ -1.72
SMC6-202ENST00000381272 TJP1Q07157 1748 aa4.3□□□□□ -1.72
SMC6-202ENST00000381272 NUP188Q5SRE5 1749 aa4.3□□□□□ -1.72
SMC6-202ENST00000381272 MAST3O60307 1309 aa4.3□□□□□ -1.72
SMC6-202ENST00000381272 SH3TC1Q8TE82 1336 aa4.3□□□□□ -1.72
SMC6-202ENST00000381272 TMEM94Q12767 1356 aa4.3□□□□□ -1.72
SMC6-202ENST00000381272 GOLGA6L6A8MZA4 724 aa4.29□□□□□ -1.72
SMC6-202ENST00000381272 EYA2O00167 538 aa4.29□□□□□ -1.72
SMC6-202ENST00000381272 HGSO14964 777 aaPredicted RBP4.29□□□□□ -1.72
SMC6-202ENST00000381272 RNF113AO15541 343 aaKnown RBP4.29□□□□□ -1.72
SMC6-202ENST00000381272 DGKIO75912 1065 aa4.29□□□□□ -1.72
SMC6-202ENST00000381272 FGFR1P11362 822 aa4.29□□□□□ -1.72
SMC6-202ENST00000381272 PDIA3P30101 505 aaKnown RBP4.29□□□□□ -1.72
SMC6-202ENST00000381272 IL15P40933 162 aaPredicted RBP4.29□□□□□ -1.72
SMC6-202ENST00000381272 ZNF75DP51815 510 aa4.29□□□□□ -1.72
SMC6-202ENST00000381272 HAND2P61296 217 aa4.29□□□□□ -1.72
SMC6-202ENST00000381272 LRMPQ12912 555 aa4.29□□□□□ -1.72
SMC6-202ENST00000381272 VWA3BQ502W6 1294 aa4.29□□□□□ -1.72
SMC6-202ENST00000381272 GORABQ5T7V8 394 aa4.29□□□□□ -1.72
SMC6-202ENST00000381272 OTUD7BQ6GQQ9 843 aa4.29□□□□□ -1.72
SMC6-202ENST00000381272 RSPO2Q6UXX9 243 aaPredicted RBP4.29□□□□□ -1.72
SMC6-202ENST00000381272 C11orf57Q6ZUT1 292 aaPredicted RBP4.29□□□□□ -1.72
SMC6-202ENST00000381272 USP53Q70EK8 1073 aa4.29□□□□□ -1.72
SMC6-202ENST00000381272 CCDC186Q7Z3E2 898 aa4.29□□□□□ -1.72
SMC6-202ENST00000381272 ZC3H18Q86VM9 953 aaKnown RBP4.29□□□□□ -1.72
SMC6-202ENST00000381272 MIB1Q86YT6 1006 aa4.29□□□□□ -1.72
SMC6-202ENST00000381272 TP53I13Q8NBR0 393 aaPredicted RBP4.29□□□□□ -1.72
SMC6-202ENST00000381272 ZCRB1Q8TBF4 217 aaKnown RBP4.29□□□□□ -1.72
SMC6-202ENST00000381272 ERCC4Q92889 916 aaPredicted RBP4.29□□□□□ -1.72
SMC6-202ENST00000381272 OSBP2Q969R2 916 aa4.29□□□□□ -1.72
SMC6-202ENST00000381272 TRIM5Q9C035 493 aa4.29□□□□□ -1.72
SMC6-202ENST00000381272 XYLT2Q9H1B5 865 aa4.29□□□□□ -1.72
SMC6-202ENST00000381272 GOLPH3LQ9H4A5 285 aa4.29□□□□□ -1.72
SMC6-202ENST00000381272 ZSCAN16Q9H4T2 348 aaPredicted RBP4.29□□□□□ -1.72
SMC6-202ENST00000381272 ARHGEF4Q9NR80 690 aa4.29□□□□□ -1.72
SMC6-202ENST00000381272 CFAP45Q9UL16 551 aa4.29□□□□□ -1.72
SMC6-202ENST00000381272 SPATA31A3Q5VYP0 1347 aa4.29□□□□□ -1.72
SMC6-202ENST00000381272 RFX7Q2KHR2 1363 aa4.29□□□□□ -1.72
SMC6-202ENST00000381272 PALLDQ8WX93 1383 aa4.29□□□□□ -1.72
SMC6-202ENST00000381272 NWD2Q9ULI1 1742 aa4.29□□□□□ -1.72
SMC6-202ENST00000381272 TRAV20A0A0B4J274 112 aa4.28□□□□□ -1.72
SMC6-202ENST00000381272 SH3D21A4FU49 640 aa4.28□□□□□ -1.72
SMC6-202ENST00000381272 OTOL1A6NHN0 477 aaPredicted RBP4.28□□□□□ -1.72
SMC6-202ENST00000381272 PRODHO43272 600 aa4.28□□□□□ -1.72
SMC6-202ENST00000381272 TPM3P06753 285 aa4.28□□□□□ -1.72
SMC6-202ENST00000381272 HMGB1P09429 215 aaKnown RBP4.28□□□□□ -1.72
SMC6-202ENST00000381272 PABPC1P11940 636 aaKnown RBP4.28□□□□□ -1.72
SMC6-202ENST00000381272 KCNC1P48547 511 aa4.28□□□□□ -1.72
SMC6-202ENST00000381272 TTC39AQ5SRH9 613 aa4.28□□□□□ -1.72
SMC6-202ENST00000381272 STEAP3Q658P3 488 aa4.28□□□□□ -1.72
SMC6-202ENST00000381272 CD300LDQ6UXZ3 194 aa4.28□□□□□ -1.72
SMC6-202ENST00000381272 NSMFQ6X4W1 530 aa4.28□□□□□ -1.72
SMC6-202ENST00000381272 RBM43Q6ZSC3 357 aaKnown RBP4.28□□□□□ -1.72
SMC6-202ENST00000381272 PLA2G4DQ86XP0 818 aa4.28□□□□□ -1.72
SMC6-202ENST00000381272 SYNE4Q8N205 404 aa4.28□□□□□ -1.72
SMC6-202ENST00000381272 SYT8Q8NBV8 401 aa4.28□□□□□ -1.72
SMC6-202ENST00000381272 ZNF526Q8TF50 670 aaPredicted RBP4.28□□□□□ -1.72
SMC6-202ENST00000381272 DCAF4Q8WV16 495 aa4.28□□□□□ -1.72
SMC6-202ENST00000381272 ZBTB8AQ96BR9 441 aa4.28□□□□□ -1.72
SMC6-202ENST00000381272 FAM89AQ96GI7 184 aa4.28□□□□□ -1.72
SMC6-202ENST00000381272 C20orf173Q96LM9 149 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms