RNA–Protein interactions for RNA: ENST00000379361.4

PTCHD1-201, Transcript of patched domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD1, Length 13,714 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1-201ENST00000379361 RAD17O75943 681 aa11.9□□□□□ -0.51
PTCHD1-201ENST00000379361 CMA1P23946 247 aa11.9□□□□□ -0.51
PTCHD1-201ENST00000379361 CCDC24Q8N4L8 307 aa11.9□□□□□ -0.51
PTCHD1-201ENST00000379361 NGRNQ9NPE2 291 aaKnown RBP11.9□□□□□ -0.51
PTCHD1-201ENST00000379361 HMOX2P30519 316 aa11.9□□□□□ -0.51
PTCHD1-201ENST00000379361 OSTNP61366 133 aa11.9□□□□□ -0.51
PTCHD1-201ENST00000379361 HDDC2Q7Z4H3 204 aa11.9□□□□□ -0.51
PTCHD1-201ENST00000379361 ZNF438Q7Z4V0 828 aa11.9□□□□□ -0.51
PTCHD1-201ENST00000379361 RAD18Q9NS91 495 aa11.9□□□□□ -0.51
PTCHD1-201ENST00000379361 PRMT3O60678 531 aa11.89□□□□□ -0.51
PTCHD1-201ENST00000379361 MRFAP1L1Q96HT8 127 aa11.89□□□□□ -0.51
PTCHD1-201ENST00000379361 PPP1R16BQ96T49 567 aa11.89□□□□□ -0.51
PTCHD1-201ENST00000379361 CHUKO15111 745 aa11.89□□□□□ -0.51
PTCHD1-201ENST00000379361 AASDHQ4L235 1098 aaPredicted RBP11.89□□□□□ -0.51
PTCHD1-201ENST00000379361 BTBD8Q5XKL5 378 aa11.89□□□□□ -0.51
PTCHD1-201ENST00000379361 AAASQ9NRG9 546 aa11.89□□□□□ -0.51
PTCHD1-201ENST00000379361 IQCA1LA6NCM1 817 aa11.89□□□□□ -0.51
PTCHD1-201ENST00000379361 STMN3Q9NZ72 180 aa11.89□□□□□ -0.51
PTCHD1-201ENST00000379361 TNKSO95271 1327 aa11.89□□□□□ -0.51
PTCHD1-201ENST00000379361 IFNAR2P48551 515 aa11.89□□□□□ -0.51
PTCHD1-201ENST00000379361 ST13P50502 369 aaKnown RBP11.89□□□□□ -0.51
PTCHD1-201ENST00000379361 RWDD2BP57060 319 aa11.89□□□□□ -0.51
PTCHD1-201ENST00000379361 NFX1Q12986 1120 aaKnown RBP11.89□□□□□ -0.51
PTCHD1-201ENST00000379361 MAN2A1Q16706 1144 aa11.89□□□□□ -0.51
PTCHD1-201ENST00000379361 FAM133BQ5BKY9 247 aaKnown RBP11.89□□□□□ -0.51
PTCHD1-201ENST00000379361 SLC27A3Q5K4L6 730 aa11.89□□□□□ -0.51
PTCHD1-201ENST00000379361 RPAINQ86UA6 219 aa11.89□□□□□ -0.51
PTCHD1-201ENST00000379361 ADCY9O60503 1353 aa11.89□□□□□ -0.51
PTCHD1-201ENST00000379361 VCAM1P19320 739 aa11.89□□□□□ -0.51
PTCHD1-201ENST00000379361 TRADDQ15628 312 aa11.89□□□□□ -0.51
PTCHD1-201ENST00000379361 SLC25A13Q9UJS0 675 aa11.89□□□□□ -0.51
PTCHD1-201ENST00000379361 POTEFA5A3E0 1075 aa11.89□□□□□ -0.51
PTCHD1-201ENST00000379361 ZAP70P43403 619 aa11.89□□□□□ -0.51
PTCHD1-201ENST00000379361 KIF23Q02241 960 aaPredicted RBP11.89□□□□□ -0.51
PTCHD1-201ENST00000379361 CCDC92Q53HC0 331 aaPredicted RBP11.89□□□□□ -0.51
PTCHD1-201ENST00000379361 ANKRD40Q6AI12 368 aa11.89□□□□□ -0.51
PTCHD1-201ENST00000379361 STKLD1Q8NE28 680 aa11.89□□□□□ -0.51
PTCHD1-201ENST00000379361 DBNDD2Q9BQY9 259 aa11.89□□□□□ -0.51
PTCHD1-201ENST00000379361 PKD2L2Q9NZM6 624 aa11.89□□□□□ -0.51
PTCHD1-201ENST00000379361 PPARGC1AQ9UBK2 798 aaKnown RBP11.89□□□□□ -0.51
PTCHD1-201ENST00000379361 HEY1Q9Y5J3 304 aa11.89□□□□□ -0.51
PTCHD1-201ENST00000379361 PIK3C2GO75747 1445 aa11.89□□□□□ -0.51
PTCHD1-201ENST00000379361 DR1Q01658 176 aa11.89□□□□□ -0.51
PTCHD1-201ENST00000379361 CEP55Q53EZ4 464 aa11.89□□□□□ -0.51
PTCHD1-201ENST00000379361 KCTD1Q719H9 257 aa11.89□□□□□ -0.51
PTCHD1-201ENST00000379361 KIAA1586Q9HCI6 787 aa11.89□□□□□ -0.51
PTCHD1-201ENST00000379361 MYO3BQ8WXR4 1341 aa11.89□□□□□ -0.51
PTCHD1-201ENST00000379361 COPB1P53618 953 aaKnown RBP11.89□□□□□ -0.51
PTCHD1-201ENST00000379361 SHROOM1Q2M3G4 852 aaPredicted RBP11.89□□□□□ -0.51
PTCHD1-201ENST00000379361 OR6P1Q8NGX9 317 aa11.89□□□□□ -0.51
PTCHD1-201ENST00000379361 THOC2Q8NI27 1593 aaKnown RBP11.89□□□□□ -0.51
PTCHD1-201ENST00000379361 SYNCRIPO60506 623 aaKnown RBP11.89□□□□□ -0.51
PTCHD1-201ENST00000379361 KRT20P35900 424 aa11.89□□□□□ -0.51
PTCHD1-201ENST00000379361 RCSD1Q6JBY9 416 aa11.89□□□□□ -0.51
PTCHD1-201ENST00000379361 FAM133AQ8N9E0 248 aa11.89□□□□□ -0.51
PTCHD1-201ENST00000379361 SYT2Q8N9I0 419 aaPredicted RBP11.89□□□□□ -0.51
PTCHD1-201ENST00000379361 SEPT3Q9UH03 358 aa11.89□□□□□ -0.51
PTCHD1-201ENST00000379361 LRRC63Q05C16 580 aa11.89□□□□□ -0.51
PTCHD1-201ENST00000379361 NEK9Q8TD19 979 aa11.89□□□□□ -0.51
PTCHD1-201ENST00000379361 COG1Q8WTW3 980 aa11.89□□□□□ -0.51
PTCHD1-201ENST00000379361 PRXQ9BXM0 1461 aa11.89□□□□□ -0.51
PTCHD1-201ENST00000379361 COL17A1Q9UMD9 1497 aaPredicted RBP11.89□□□□□ -0.51
PTCHD1-201ENST00000379361 MMEP08473 750 aa11.89□□□□□ -0.51
PTCHD1-201ENST00000379361 GYG1P46976 350 aa11.89□□□□□ -0.51
PTCHD1-201ENST00000379361 XPO6Q96QU8 1125 aaKnown RBP11.89□□□□□ -0.51
PTCHD1-201ENST00000379361 CEP250Q9BV73 2442 aa11.88□□□□□ -0.51
PTCHD1-201ENST00000379361 CIAPIN1Q6FI81 312 aa11.88□□□□□ -0.51
PTCHD1-201ENST00000379361 ZNF544Q6NX49 715 aa11.88□□□□□ -0.51
PTCHD1-201ENST00000379361 CCNYL1Q8N7R7 359 aa11.88□□□□□ -0.51
PTCHD1-201ENST00000379361 RSPH10B2B2RC85 870 aa11.88□□□□□ -0.51
PTCHD1-201ENST00000379361 RSPH10BP0C881 870 aa11.88□□□□□ -0.51
PTCHD1-201ENST00000379361 GPC3P51654 580 aa11.88□□□□□ -0.51
PTCHD1-201ENST00000379361 CNTN1Q12860 1018 aa11.88□□□□□ -0.51
PTCHD1-201ENST00000379361 M0QYV0 167 aa11.88□□□□□ -0.51
PTCHD1-201ENST00000379361 FCER1AP12319 257 aa11.88□□□□□ -0.51
PTCHD1-201ENST00000379361 KRT17Q04695 432 aa11.88□□□□□ -0.51
PTCHD1-201ENST00000379361 SERTAD1Q9UHV2 236 aa11.88□□□□□ -0.51
PTCHD1-201ENST00000379361 RUNX1T1Q06455 604 aa11.88□□□□□ -0.51
PTCHD1-201ENST00000379361 CLDN3O15551 220 aa11.88□□□□□ -0.51
PTCHD1-201ENST00000379361 CSE1LP55060 971 aaKnown RBP11.88□□□□□ -0.51
PTCHD1-201ENST00000379361 LVRNQ6Q4G3 990 aa11.88□□□□□ -0.51
PTCHD1-201ENST00000379361 ARHGAP18Q8N392 663 aa11.88□□□□□ -0.51
PTCHD1-201ENST00000379361 BMP3P12645 472 aa11.88□□□□□ -0.51
PTCHD1-201ENST00000379361 SDC4P31431 198 aa11.88□□□□□ -0.51
PTCHD1-201ENST00000379361 SNAP25P60880 206 aa11.88□□□□□ -0.51
PTCHD1-201ENST00000379361 INPP5AQ14642 412 aa11.88□□□□□ -0.51
PTCHD1-201ENST00000379361 KLHL24Q6TFL4 600 aa11.88□□□□□ -0.51
PTCHD1-201ENST00000379361 SPATA33Q96N06 139 aa11.88□□□□□ -0.51
PTCHD1-201ENST00000379361 FOXP3Q9BZS1 431 aa11.88□□□□□ -0.51
PTCHD1-201ENST00000379361 DFFAO00273 331 aa11.88□□□□□ -0.51
PTCHD1-201ENST00000379361 CYTH3O43739 400 aa11.88□□□□□ -0.51
PTCHD1-201ENST00000379361 DIS3LQ8TF46 1054 aaKnown RBP11.88□□□□□ -0.51
PTCHD1-201ENST00000379361 NSMCE4AQ9NXX6 385 aa11.88□□□□□ -0.51
PTCHD1-201ENST00000379361 POLR3AO14802 1390 aaPredicted RBP11.88□□□□□ -0.51
PTCHD1-201ENST00000379361 LRRC74AQ0VAA2 488 aa11.88□□□□□ -0.51
PTCHD1-201ENST00000379361 RNF123Q5XPI4 1314 aa11.88□□□□□ -0.51
PTCHD1-201ENST00000379361 CCDC195A0A1B0GUA6 201 aa11.88□□□□□ -0.51
PTCHD1-201ENST00000379361 BBS7Q8IWZ6 715 aa11.88□□□□□ -0.51
PTCHD1-201ENST00000379361 PNMA6FA0A0J9YX94 578 aa11.87□□□□□ -0.51
PTCHD1-201ENST00000379361 LZTS3O60299 673 aaPredicted RBP11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms