RNA–Protein interactions for RNA: ENST00000378543.2

FAAP20-201, Transcript of FA core complex associated protein 20, humanhuman

TSL 2

Gene FAAP20, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAAP20-201ENST00000378543 TFDP1Q14186 410 aa26.12■■□□□ 1.77
FAAP20-201ENST00000378543 SMAD2Q15796 467 aaKnown RBP26.12■■□□□ 1.77
FAAP20-201ENST00000378543 RILPL1Q5EBL4 403 aa26.12■■□□□ 1.77
FAAP20-201ENST00000378543 RSPH1Q8WYR4 309 aa26.12■■□□□ 1.77
FAAP20-201ENST00000378543 POLR3FQ9H1D9 316 aaPredicted RBP26.12■■□□□ 1.77
FAAP20-201ENST00000378543 NRDE2Q9H7Z3 1164 aa26.12■■□□□ 1.77
FAAP20-201ENST00000378543 BARX2Q9UMQ3 279 aaPredicted RBP26.12■■□□□ 1.77
FAAP20-201ENST00000378543 HIDE1A8MVS5 230 aa26.11■■□□□ 1.77
FAAP20-201ENST00000378543 TSPAN1O60635 241 aa26.11■■□□□ 1.77
FAAP20-201ENST00000378543 ZC3H11AO75152 810 aaKnown RBP eCLIP26.11■■□□□ 1.77
FAAP20-201ENST00000378543 MUTP22033 750 aa26.11■■□□□ 1.77
FAAP20-201ENST00000378543 RPA1P27694 616 aa26.11■■□□□ 1.77
FAAP20-201ENST00000378543 ALDH7A1P49419 539 aaKnown RBP26.11■■□□□ 1.77
FAAP20-201ENST00000378543 ZP2Q05996 745 aa26.11■■□□□ 1.77
FAAP20-201ENST00000378543 POTEGQ6S5H5 508 aa26.11■■□□□ 1.77
FAAP20-201ENST00000378543 MAEAQ7L5Y9 396 aa26.11■■□□□ 1.77
FAAP20-201ENST00000378543 VN1R2Q8NFZ6 395 aa26.11■■□□□ 1.77
FAAP20-201ENST00000378543 NACC1Q96RE7 527 aa26.11■■□□□ 1.77
FAAP20-201ENST00000378543 CDCA3Q99618 268 aaPredicted RBP26.11■■□□□ 1.77
FAAP20-201ENST00000378543 RAB34Q9BZG1 259 aa26.11■■□□□ 1.77
FAAP20-201ENST00000378543 GPRC5CQ9NQ84 441 aa26.11■■□□□ 1.77
FAAP20-201ENST00000378543 PRKAG3Q9UGI9 489 aa26.11■■□□□ 1.77
FAAP20-201ENST00000378543 DBR1Q9UK59 544 aaKnown RBP26.11■■□□□ 1.77
FAAP20-201ENST00000378543 INO80B-WBP1J3KQ70 363 aa26.1■■□□□ 1.77
FAAP20-201ENST00000378543 EYA4O95677 639 aa26.1■■□□□ 1.77
FAAP20-201ENST00000378543 TOB1P50616 345 aaPredicted RBP26.1■■□□□ 1.77
FAAP20-201ENST00000378543 AFF1P51825 1210 aaKnown RBP26.1■■□□□ 1.77
FAAP20-201ENST00000378543 MBTD1Q05BQ5 628 aa26.1■■□□□ 1.77
FAAP20-201ENST00000378543 PDIA5Q14554 519 aa26.1■■□□□ 1.77
FAAP20-201ENST00000378543 AMHR2Q16671 573 aa26.1■■□□□ 1.77
FAAP20-201ENST00000378543 TMC7Q7Z402 723 aa26.1■■□□□ 1.77
FAAP20-201ENST00000378543 CPB2Q96IY4 423 aa26.1■■□□□ 1.77
FAAP20-201ENST00000378543 RSAD1Q9HA92 442 aa26.1■■□□□ 1.77
FAAP20-201ENST00000378543 NGRNQ9NPE2 291 aaKnown RBP26.1■■□□□ 1.77
FAAP20-201ENST00000378543 B4GALT3O60512 393 aa26.09■■□□□ 1.77
FAAP20-201ENST00000378543 PDCP20941 246 aa26.09■■□□□ 1.77
FAAP20-201ENST00000378543 AXLP30530 894 aa26.09■■□□□ 1.77
FAAP20-201ENST00000378543 FXR2P51116 673 aaKnown RBP eCLIP26.09■■□□□ 1.77
FAAP20-201ENST00000378543 RNASELQ05823 741 aaKnown RBP26.09■■□□□ 1.77
FAAP20-201ENST00000378543 COASYQ13057 564 aa26.09■■□□□ 1.77
FAAP20-201ENST00000378543 PCBP1Q15365 356 aaKnown RBP eCLIP26.09■■□□□ 1.772e-7■■■□□ 18.9
FAAP20-201ENST00000378543 LARP1BQ659C4 914 aaKnown RBP26.09■■□□□ 1.77
FAAP20-201ENST00000378543 HAUS3Q68CZ6 603 aa26.09■■□□□ 1.77
FAAP20-201ENST00000378543 MCTP1Q6DN14 999 aa26.09■■□□□ 1.77
FAAP20-201ENST00000378543 TMEM173Q86WV6 379 aaPredicted RBP26.09■■□□□ 1.77
FAAP20-201ENST00000378543 ADHFE1Q8IWW8 467 aa26.09■■□□□ 1.77
FAAP20-201ENST00000378543 SMG8Q8ND04 991 aaKnown RBP26.09■■□□□ 1.77
FAAP20-201ENST00000378543 C1QTNF1Q9BXJ1 281 aa26.09■■□□□ 1.77
FAAP20-201ENST00000378543 EIF2AQ9BY44 585 aaKnown RBP26.09■■□□□ 1.77
FAAP20-201ENST00000378543 GBP3Q9H0R5 595 aa26.09■■□□□ 1.77
FAAP20-201ENST00000378543 DNAJB4Q9UDY4 337 aa26.09■■□□□ 1.77
FAAP20-201ENST00000378543 PCDHB6Q9Y5E3 794 aa26.09■■□□□ 1.77
FAAP20-201ENST00000378543 C19orf67A6NJJ6 358 aa26.08■■□□□ 1.77
FAAP20-201ENST00000378543 GALTP07902 379 aa26.08■■□□□ 1.77
FAAP20-201ENST00000378543 NCLP19338 710 aaKnown RBP26.08■■□□□ 1.77
FAAP20-201ENST00000378543 PRPHP41219 470 aa26.08■■□□□ 1.77
FAAP20-201ENST00000378543 KCNC3Q14003 757 aa26.08■■□□□ 1.77
FAAP20-201ENST00000378543 ECM1Q16610 540 aa26.08■■□□□ 1.77
FAAP20-201ENST00000378543 ZNF280BQ86YH2 543 aa26.08■■□□□ 1.77
FAAP20-201ENST00000378543 SMRP1Q8NCR6 262 aa26.08■■□□□ 1.77
FAAP20-201ENST00000378543 TMEM169Q96HH4 297 aa26.08■■□□□ 1.77
FAAP20-201ENST00000378543 INTS4Q96HW7 963 aaKnown RBP26.08■■□□□ 1.77
FAAP20-201ENST00000378543 NFKBIZQ9BYH8 718 aa26.08■■□□□ 1.77
FAAP20-201ENST00000378543 PI4K2BG5E9Z4 385 aa26.07■■□□□ 1.76
FAAP20-201ENST00000378543 PTGDRQ13258 359 aa26.07■■□□□ 1.76
FAAP20-201ENST00000378543 NOTUMQ6P988 496 aa26.07■■□□□ 1.76
FAAP20-201ENST00000378543 CNNM3Q8NE01 707 aa26.07■■□□□ 1.76
FAAP20-201ENST00000378543 MCPH1Q8NEM0 835 aa26.07■■□□□ 1.76
FAAP20-201ENST00000378543 URGCPQ8TCY9 931 aa26.07■■□□□ 1.76
FAAP20-201ENST00000378543 BCL7CQ8WUZ0 217 aaPredicted RBP26.07■■□□□ 1.76
FAAP20-201ENST00000378543 IPPQ9Y573 584 aa26.07■■□□□ 1.76
FAAP20-201ENST00000378543 CNTNAP2Q9UHC6 1331 aa26.07■■□□□ 1.76
FAAP20-201ENST00000378543 FSD2A1L4K1 749 aa26.06■■□□□ 1.76
FAAP20-201ENST00000378543 B4GALT5O43286 388 aa26.06■■□□□ 1.76
FAAP20-201ENST00000378543 DDHD2O94830 711 aa26.06■■□□□ 1.76
FAAP20-201ENST00000378543 ITGA4P13612 1032 aa26.06■■□□□ 1.76
FAAP20-201ENST00000378543 ARF4P18085 180 aaPredicted RBP26.06■■□□□ 1.76
FAAP20-201ENST00000378543 SLC11A1P49279 550 aa26.06■■□□□ 1.76
FAAP20-201ENST00000378543 NCBP1Q09161 790 aaKnown RBP26.06■■□□□ 1.76
FAAP20-201ENST00000378543 SMC1AQ14683 1233 aaKnown RBP26.06■■□□□ 1.76
FAAP20-201ENST00000378543 MRPL43Q8N983 215 aaKnown RBP26.06■■□□□ 1.76
FAAP20-201ENST00000378543 CCDC51Q96ER9 411 aa26.06■■□□□ 1.76
FAAP20-201ENST00000378543 IGSF21Q96ID5 467 aa26.06■■□□□ 1.76
FAAP20-201ENST00000378543 CSRNP2Q9H175 543 aa26.06■■□□□ 1.76
FAAP20-201ENST00000378543 RNF39Q9H2S5 420 aa26.06■■□□□ 1.76
FAAP20-201ENST00000378543 EIF4ENIF1Q9NRA8 985 aaKnown RBP26.06■■□□□ 1.76
FAAP20-201ENST00000378543 LRWD1Q9UFC0 647 aa26.06■■□□□ 1.76
FAAP20-201ENST00000378543 ARHGEF35A5YM69 484 aa26.05■■□□□ 1.76
FAAP20-201ENST00000378543 C2orf71A6NGG8 1288 aa26.05■■□□□ 1.76
FAAP20-201ENST00000378543 LRRIQ4A6NIV6 560 aa26.05■■□□□ 1.76
FAAP20-201ENST00000378543 CCT6AP40227 531 aaKnown RBP26.05■■□□□ 1.76
FAAP20-201ENST00000378543 PADI6Q6TGC4 694 aa26.05■■□□□ 1.76
FAAP20-201ENST00000378543 TMEM184AQ6ZMB5 413 aa26.05■■□□□ 1.76
FAAP20-201ENST00000378543 HES2Q9Y543 173 aa26.05■■□□□ 1.76
FAAP20-201ENST00000378543 TDRD15B5MCY1 1934 aaKnown RBP26.04■■□□□ 1.76
FAAP20-201ENST00000378543 C5orf42Q9H799 3197 aa26.04■■□□□ 1.76
FAAP20-201ENST00000378543 CARNS1A5YM72 827 aa26.04■■□□□ 1.76
FAAP20-201ENST00000378543 POMCP01189 267 aa26.04■■□□□ 1.76
FAAP20-201ENST00000378543 CYP11B2P19099 503 aa26.04■■□□□ 1.76
FAAP20-201ENST00000378543 COL9A1P20849 921 aa26.04■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms