RNA–Protein interactions for RNA: ENST00000378526.8

LIG3-202, Transcript of DNA ligase 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene LIG3, Length 8,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-202ENST00000378526 WDR37Q9Y2I8 494 aa9.24□□□□□ -0.93
LIG3-202ENST00000378526 C1orf232A0A0U1RR37 186 aa9.24□□□□□ -0.93
LIG3-202ENST00000378526 MED7O43513 233 aa9.24□□□□□ -0.93
LIG3-202ENST00000378526 ENO1P06733 434 aaKnown RBP9.24□□□□□ -0.93
LIG3-202ENST00000378526 ZNF568Q3ZCX4 644 aa9.24□□□□□ -0.93
LIG3-202ENST00000378526 ZNF786Q8N393 782 aa9.24□□□□□ -0.93
LIG3-202ENST00000378526 ZNF579Q8NAF0 562 aaKnown RBP9.24□□□□□ -0.93
LIG3-202ENST00000378526 GTPBP6O43824 516 aaPredicted RBP9.24□□□□□ -0.93
LIG3-202ENST00000378526 GAS2O43903 313 aaKnown RBP9.24□□□□□ -0.93
LIG3-202ENST00000378526 AGBL2Q5U5Z8 902 aa9.24□□□□□ -0.93
LIG3-202ENST00000378526 KRT40Q6A162 431 aa9.24□□□□□ -0.93
LIG3-202ENST00000378526 FBXO42Q6P3S6 717 aa9.24□□□□□ -0.93
LIG3-202ENST00000378526 COMMD9Q9P000 198 aa9.24□□□□□ -0.93
LIG3-202ENST00000378526 TCHHL1Q5QJ38 904 aaPredicted RBP9.24□□□□□ -0.93
LIG3-202ENST00000378526 KIAA0408Q6ZU52 694 aa9.24□□□□□ -0.93
LIG3-202ENST00000378526 PCDHA13Q9Y5I0 950 aa9.24□□□□□ -0.93
LIG3-202ENST00000378526 CALB1P05937 261 aa9.23□□□□□ -0.93
LIG3-202ENST00000378526 CSE1LP55060 971 aaKnown RBP9.23□□□□□ -0.93
LIG3-202ENST00000378526 NDUFAF6Q330K2 333 aa9.23□□□□□ -0.93
LIG3-202ENST00000378526 LDHAL6AQ6ZMR3 332 aa9.23□□□□□ -0.93
LIG3-202ENST00000378526 GALNT4Q8N4A0 578 aa9.23□□□□□ -0.93
LIG3-202ENST00000378526 RAD18Q9NS91 495 aa9.23□□□□□ -0.93
LIG3-202ENST00000378526 RNF113AO15541 343 aaKnown RBP9.23□□□□□ -0.93
LIG3-202ENST00000378526 CHMLP26374 656 aa9.23□□□□□ -0.93
LIG3-202ENST00000378526 SOX5P35711 763 aa9.23□□□□□ -0.93
LIG3-202ENST00000378526 TSTA3Q13630 321 aaPredicted RBP9.23□□□□□ -0.93
LIG3-202ENST00000378526 TXNDC11Q6PKC3 985 aa9.23□□□□□ -0.93
LIG3-202ENST00000378526 ANKLE2Q86XL3 938 aa9.23□□□□□ -0.93
LIG3-202ENST00000378526 RAPGEF3O95398 923 aa9.23□□□□□ -0.93
LIG3-202ENST00000378526 KRT1P04264 644 aa9.23□□□□□ -0.93
LIG3-202ENST00000378526 CYP7A1P22680 504 aa9.23□□□□□ -0.93
LIG3-202ENST00000378526 S100A2P29034 98 aa9.23□□□□□ -0.93
LIG3-202ENST00000378526 RIBC1Q8N443 379 aaPredicted RBP9.23□□□□□ -0.93
LIG3-202ENST00000378526 RIN3Q8TB24 985 aa9.23□□□□□ -0.93
LIG3-202ENST00000378526 TSSK1BQ9BXA7 367 aa9.23□□□□□ -0.93
LIG3-202ENST00000378526 MOV10Q9HCE1 1003 aaKnown RBP9.23□□□□□ -0.93
LIG3-202ENST00000378526 C20orf96Q9NUD7 363 aaPredicted RBP9.23□□□□□ -0.93
LIG3-202ENST00000378526 SFI1A8K8P3 1242 aa9.23□□□□□ -0.93
LIG3-202ENST00000378526 NPR3P17342 541 aa9.23□□□□□ -0.93
LIG3-202ENST00000378526 CXCR5P32302 372 aa9.23□□□□□ -0.93
LIG3-202ENST00000378526 YARSP54577 528 aaKnown RBP9.23□□□□□ -0.93
LIG3-202ENST00000378526 KDSRQ06136 332 aa9.23□□□□□ -0.93
LIG3-202ENST00000378526 RESTQ13127 1097 aa9.23□□□□□ -0.93
LIG3-202ENST00000378526 FASTKD1Q53R41 847 aaKnown RBP9.23□□□□□ -0.93
LIG3-202ENST00000378526 LRRC8DQ7L1W4 858 aa9.23□□□□□ -0.93
LIG3-202ENST00000378526 SLFN12Q8IYM2 578 aa9.23□□□□□ -0.93
LIG3-202ENST00000378526 NSL1Q96IY1 281 aa9.23□□□□□ -0.93
LIG3-202ENST00000378526 CTNNAL1Q9UBT7 734 aa9.23□□□□□ -0.93
LIG3-202ENST00000378526 DTNAQ9Y4J8 743 aa9.23□□□□□ -0.93
LIG3-202ENST00000378526 ZBTB22O15209 634 aa9.23□□□□□ -0.93
LIG3-202ENST00000378526 PIK3CAP42336 1068 aa9.23□□□□□ -0.93
LIG3-202ENST00000378526 SZRD1Q7Z422 152 aa9.23□□□□□ -0.93
LIG3-202ENST00000378526 AZI2Q9H6S1 392 aa9.23□□□□□ -0.93
LIG3-202ENST00000378526 JMJD4Q9H9V9 463 aa9.23□□□□□ -0.93
LIG3-202ENST00000378526 ENOPH1Q9UHY7 261 aa9.23□□□□□ -0.93
LIG3-202ENST00000378526 PPP2R3BQ9Y5P8 575 aa9.23□□□□□ -0.93
LIG3-202ENST00000378526 SGSM2O43147 1006 aa9.23□□□□□ -0.93
LIG3-202ENST00000378526 ARL4AP40617 200 aa9.23□□□□□ -0.93
LIG3-202ENST00000378526 GYS2P54840 703 aa9.23□□□□□ -0.93
LIG3-202ENST00000378526 DHX34Q14147 1143 aaKnown RBP9.23□□□□□ -0.93
LIG3-202ENST00000378526 STAT4Q14765 748 aa9.23□□□□□ -0.93
LIG3-202ENST00000378526 SYDE1Q6ZW31 735 aaPredicted RBP9.23□□□□□ -0.93
LIG3-202ENST00000378526 CABP7Q86V35 215 aa9.23□□□□□ -0.93
LIG3-202ENST00000378526 LRWD1Q9UFC0 647 aa9.23□□□□□ -0.93
LIG3-202ENST00000378526 MAP3K2Q9Y2U5 619 aa9.23□□□□□ -0.93
LIG3-202ENST00000378526 LAD1O00515 517 aa9.22□□□□□ -0.93
LIG3-202ENST00000378526 ECE2O60344 883 aa9.22□□□□□ -0.93
LIG3-202ENST00000378526 CNOT3O75175 753 aaKnown RBP9.22□□□□□ -0.93
LIG3-202ENST00000378526 FKBP6O75344 327 aa9.22□□□□□ -0.93
LIG3-202ENST00000378526 ATF6P18850 670 aa9.22□□□□□ -0.93
LIG3-202ENST00000378526 AKAP14Q86UN6 197 aa9.22□□□□□ -0.93
LIG3-202ENST00000378526 PEX5LQ8IYB4 626 aa9.22□□□□□ -0.93
LIG3-202ENST00000378526 SPICE1Q8N0Z3 855 aa9.22□□□□□ -0.93
LIG3-202ENST00000378526 CDC26Q8NHZ8 85 aa9.22□□□□□ -0.93
LIG3-202ENST00000378526 JADE3Q92613 823 aa9.22□□□□□ -0.93
LIG3-202ENST00000378526 TEX13AQ9BXU3 409 aaPredicted RBP9.22□□□□□ -0.93
LIG3-202ENST00000378526 STOX2Q9P2F5 926 aaPredicted RBP9.22□□□□□ -0.93
LIG3-202ENST00000378526 ATXN10Q9UBB4 475 aa9.22□□□□□ -0.93
LIG3-202ENST00000378526 ANKRD50Q9ULJ7 1429 aa9.22□□□□□ -0.93
LIG3-202ENST00000378526 KIAA1107Q9UPP5 1409 aa9.22□□□□□ -0.93
LIG3-202ENST00000378526 MSH3P20585 1137 aa9.22□□□□□ -0.93
LIG3-202ENST00000378526 IL15P40933 162 aaPredicted RBP9.22□□□□□ -0.93
LIG3-202ENST00000378526 GALNT17Q6IS24 598 aa9.22□□□□□ -0.93
LIG3-202ENST00000378526 TTC27Q6P3X3 843 aa9.22□□□□□ -0.93
LIG3-202ENST00000378526 PIK3AP1Q6ZUJ8 805 aa9.22□□□□□ -0.93
LIG3-202ENST00000378526 LENG1Q96BZ8 264 aaPredicted RBP9.22□□□□□ -0.93
LIG3-202ENST00000378526 FAF2Q96CS3 445 aa9.22□□□□□ -0.93
LIG3-202ENST00000378526 SLITRK6Q9H5Y7 841 aa9.22□□□□□ -0.93
LIG3-202ENST00000378526 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.22□□□□□ -0.93
LIG3-202ENST00000378526 KIF21AQ7Z4S6 1674 aa9.22□□□□□ -0.93
LIG3-202ENST00000378526 TRIM49BA6NDI0 452 aa9.22□□□□□ -0.93
LIG3-202ENST00000378526 TRIM49D1C9J1S8 452 aa9.22□□□□□ -0.93
LIG3-202ENST00000378526 TEX46H3BTG2 121 aa9.22□□□□□ -0.93
LIG3-202ENST00000378526 ADCY6O43306 1168 aa9.22□□□□□ -0.93
LIG3-202ENST00000378526 APOL3O95236 402 aa9.22□□□□□ -0.93
LIG3-202ENST00000378526 KRT19P08727 400 aa9.22□□□□□ -0.93
LIG3-202ENST00000378526 ADSLP30566 484 aaPredicted RBP9.22□□□□□ -0.93
LIG3-202ENST00000378526 LIN54Q6MZP7 749 aa9.22□□□□□ -0.93
LIG3-202ENST00000378526 SLC25A24Q6NUK1 477 aa9.22□□□□□ -0.93
LIG3-202ENST00000378526 STK32CQ86UX6 486 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms