RNA–Protein interactions for RNA: ENST00000378409.7

CCDC107-204, Transcript of coiled-coil domain containing 107, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC107, Length 1,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107-204ENST00000378409 SLC39A5Q6ZMH5 540 aa17.31■□□□□ 0.36
CCDC107-204ENST00000378409 PPP4R3CPQ6ZMV5 832 aa17.31■□□□□ 0.36
CCDC107-204ENST00000378409 SRGAP1Q7Z6B7 1085 aa17.31■□□□□ 0.36
CCDC107-204ENST00000378409 IFNLR1Q8IU57 520 aaPredicted RBP17.31■□□□□ 0.36
CCDC107-204ENST00000378409 ZNF710Q8N1W2 664 aa17.31■□□□□ 0.36
CCDC107-204ENST00000378409 CSGALNACT2Q8N6G5 542 aa17.31■□□□□ 0.36
CCDC107-204ENST00000378409 GCOM2Q9BZD3 368 aaPredicted RBP17.31■□□□□ 0.36
CCDC107-204ENST00000378409 MINDY3Q9H8M7 445 aa17.31■□□□□ 0.36
CCDC107-204ENST00000378409 CDHR5Q9HBB8 845 aa17.31■□□□□ 0.36
CCDC107-204ENST00000378409 BRCA2P51587 3418 aa17.3■□□□□ 0.36
CCDC107-204ENST00000378409 MROH7Q68CQ1 1323 aa17.3■□□□□ 0.36
CCDC107-204ENST00000378409 FSD2A1L4K1 749 aa17.3■□□□□ 0.36
CCDC107-204ENST00000378409 CLIC2O15247 247 aa17.3■□□□□ 0.36
CCDC107-204ENST00000378409 EDN1P05305 212 aa17.3■□□□□ 0.36
CCDC107-204ENST00000378409 COL6A1P12109 1028 aa17.3■□□□□ 0.36
CCDC107-204ENST00000378409 CAPN2P17655 700 aa17.3■□□□□ 0.36
CCDC107-204ENST00000378409 EDRF1Q3B7T1 1238 aa17.3■□□□□ 0.36
CCDC107-204ENST00000378409 FOXR2Q6PJQ5 311 aa17.3■□□□□ 0.36
CCDC107-204ENST00000378409 RPAINQ86UA6 219 aa17.3■□□□□ 0.36
CCDC107-204ENST00000378409 FAM126BQ8IXS8 530 aa17.3■□□□□ 0.36
CCDC107-204ENST00000378409 GOLGA5Q8TBA6 731 aa17.3■□□□□ 0.36
CCDC107-204ENST00000378409 DHX38Q92620 1227 aaKnown RBP17.3■□□□□ 0.36
CCDC107-204ENST00000378409 PAWRQ96IZ0 340 aaKnown RBP17.3■□□□□ 0.36
CCDC107-204ENST00000378409 SRRTQ9BXP5 876 aaKnown RBP17.3■□□□□ 0.36
CCDC107-204ENST00000378409 MRPL4Q9BYD3 311 aaKnown RBP17.3■□□□□ 0.36
CCDC107-204ENST00000378409 CELF4Q9BZC1 486 aaKnown RBP17.3■□□□□ 0.36
CCDC107-204ENST00000378409 C11orf49Q9H6J7 331 aa17.3■□□□□ 0.36
CCDC107-204ENST00000378409 AGPAT3Q9NRZ7 376 aa17.3■□□□□ 0.36
CCDC107-204ENST00000378409 PRMT7Q9NVM4 692 aaPredicted RBP17.3■□□□□ 0.36
CCDC107-204ENST00000378409 FANCLQ9NW38 375 aa17.3■□□□□ 0.36
CCDC107-204ENST00000378409 TRAF3IP3Q9Y228 551 aa17.3■□□□□ 0.36
CCDC107-204ENST00000378409 USP20Q9Y2K6 914 aa17.3■□□□□ 0.36
CCDC107-204ENST00000378409 TRPV2Q9Y5S1 764 aa17.3■□□□□ 0.36
CCDC107-204ENST00000378409 CDY2AQ9Y6F7 541 aa17.3■□□□□ 0.36
CCDC107-204ENST00000378409 TANC1Q9C0D5 1861 aa17.29■□□□□ 0.36
CCDC107-204ENST00000378409 TISP43B9A030 160 aa17.29■□□□□ 0.36
CCDC107-204ENST00000378409 ANKRD63C9JTQ0 380 aa17.29■□□□□ 0.36
CCDC107-204ENST00000378409 TLR3O15455 904 aaKnown RBP17.29■□□□□ 0.36
CCDC107-204ENST00000378409 PQBP1O60828 265 aaKnown RBP17.29■□□□□ 0.36
CCDC107-204ENST00000378409 NR3C1P04150 777 aa17.29■□□□□ 0.36
CCDC107-204ENST00000378409 DARSP14868 501 aaKnown RBP17.29■□□□□ 0.36
CCDC107-204ENST00000378409 LIG4P49917 911 aa17.29■□□□□ 0.36
CCDC107-204ENST00000378409 CRYBB1P53674 252 aaPredicted RBP17.29■□□□□ 0.36
CCDC107-204ENST00000378409 PRPF4BQ13523 1007 aaKnown RBP17.29■□□□□ 0.36
CCDC107-204ENST00000378409 TMEM132AQ24JP5 1023 aa17.29■□□□□ 0.36
CCDC107-204ENST00000378409 HSP90AA4PQ58FG1 418 aa17.29■□□□□ 0.36
CCDC107-204ENST00000378409 EEF2KMTQ96G04 330 aa17.29■□□□□ 0.36
CCDC107-204ENST00000378409 FZD8Q9H461 694 aa17.29■□□□□ 0.36
CCDC107-204ENST00000378409 SAMSN1Q9NSI8 373 aaKnown RBP17.29■□□□□ 0.36
CCDC107-204ENST00000378409 CGNQ9P2M7 1197 aaKnown RBP17.29■□□□□ 0.36
CCDC107-204ENST00000378409 ACKR2O00590 384 aa17.28■□□□□ 0.36
CCDC107-204ENST00000378409 ERLIN2O94905 339 aa17.28■□□□□ 0.36
CCDC107-204ENST00000378409 PIGRP01833 764 aa17.28■□□□□ 0.36
CCDC107-204ENST00000378409 IQCF3P0C7M6 154 aa17.28■□□□□ 0.36
CCDC107-204ENST00000378409 EIF4BP23588 611 aaKnown RBP17.28■□□□□ 0.36
CCDC107-204ENST00000378409 NR2F2P24468 414 aa17.28■□□□□ 0.36
CCDC107-204ENST00000378409 CYP2J2P51589 502 aa17.28■□□□□ 0.36
CCDC107-204ENST00000378409 FKBP3Q00688 224 aaKnown RBP17.28■□□□□ 0.36
CCDC107-204ENST00000378409 SNX17Q15036 470 aa17.28■□□□□ 0.36
CCDC107-204ENST00000378409 FAM187BQ17R55 369 aa17.28■□□□□ 0.36
CCDC107-204ENST00000378409 TRIM71Q2Q1W2 868 aaKnown RBP17.28■□□□□ 0.36
CCDC107-204ENST00000378409 ARMCX5Q6P1M9 558 aa17.28■□□□□ 0.36
CCDC107-204ENST00000378409 SLC39A4Q6P5W5 647 aa17.28■□□□□ 0.36
CCDC107-204ENST00000378409 TARS2Q9BW92 718 aaKnown RBP17.28■□□□□ 0.36
CCDC107-204ENST00000378409 TTLL13PA6NNM8 815 aa17.27■□□□□ 0.36
CCDC107-204ENST00000378409 B4GALT5O43286 388 aa17.27■□□□□ 0.36
CCDC107-204ENST00000378409 CAND2O75155 1236 aa17.27■□□□□ 0.36
CCDC107-204ENST00000378409 FGFR1OPO95684 399 aaKnown RBP17.27■□□□□ 0.36
CCDC107-204ENST00000378409 CD4P01730 458 aa17.27■□□□□ 0.36
CCDC107-204ENST00000378409 CHRNA1P02708 482 aa17.27■□□□□ 0.36
CCDC107-204ENST00000378409 FGFR4P22455 802 aa17.27■□□□□ 0.36
CCDC107-204ENST00000378409 SFPQP23246 707 aaKnown RBP eCLIP17.27■□□□□ 0.36
CCDC107-204ENST00000378409 RPL13P26373 211 aaKnown RBP17.27■□□□□ 0.36
CCDC107-204ENST00000378409 MATR3P43243 847 aaKnown RBP eCLIP17.27■□□□□ 0.36
CCDC107-204ENST00000378409 SNRPFP62306 86 aaKnown RBP17.27■□□□□ 0.36
CCDC107-204ENST00000378409 MGAT3Q09327 533 aa17.27■□□□□ 0.36
CCDC107-204ENST00000378409 ADAM9Q13443 819 aa17.27■□□□□ 0.36
CCDC107-204ENST00000378409 NFIL3Q16649 462 aa17.27■□□□□ 0.36
CCDC107-204ENST00000378409 TRIM60Q495X7 471 aa17.27■□□□□ 0.36
CCDC107-204ENST00000378409 ZPBP2Q6X784 338 aa17.27■□□□□ 0.36
CCDC107-204ENST00000378409 LRRC55Q6ZSA7 311 aa17.27■□□□□ 0.36
CCDC107-204ENST00000378409 CATSPER4Q7RTX7 472 aa17.27■□□□□ 0.36
CCDC107-204ENST00000378409 NECAB2Q7Z6G3 386 aa17.27■□□□□ 0.36
CCDC107-204ENST00000378409 CCDC155Q8N6L0 562 aa17.27■□□□□ 0.36
CCDC107-204ENST00000378409 NOC3LQ8WTT2 800 aaKnown RBP17.27■□□□□ 0.36
CCDC107-204ENST00000378409 TMEM40Q8WWA1 233 aa17.27■□□□□ 0.36
CCDC107-204ENST00000378409 POMGNT1Q8WZA1 660 aa17.27■□□□□ 0.36
CCDC107-204ENST00000378409 PRIMPOLQ96LW4 560 aa17.27■□□□□ 0.36
CCDC107-204ENST00000378409 ACO2Q99798 780 aaKnown RBP17.27■□□□□ 0.36
CCDC107-204ENST00000378409 HSD3B7Q9H2F3 369 aa17.27■□□□□ 0.36
CCDC107-204ENST00000378409 PCIF1Q9H4Z3 704 aa17.27■□□□□ 0.36
CCDC107-204ENST00000378409 THAP9Q9H5L6 903 aa17.27■□□□□ 0.36
CCDC107-204ENST00000378409 GRPEL1Q9HAV7 217 aa17.27■□□□□ 0.36
CCDC107-204ENST00000378409 ANKFY1Q9P2R3 1169 aa17.27■□□□□ 0.36
CCDC107-204ENST00000378409 CNTNAP2Q9UHC6 1331 aa17.26■□□□□ 0.35
CCDC107-204ENST00000378409 DNAH12Q6ZR08 3092 aa17.26■□□□□ 0.35
CCDC107-204ENST00000378409 ALPK3Q96L96 1907 aa17.26■□□□□ 0.35
CCDC107-204ENST00000378409 DCDC2CA8MYV0 355 aa17.26■□□□□ 0.35
CCDC107-204ENST00000378409 CETN3O15182 167 aa17.26■□□□□ 0.35
CCDC107-204ENST00000378409 TSPAN1O60635 241 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms