RNA–Protein interactions for RNA: ENST00000378133.4

PCDHA1-201, Transcript of protocadherin alpha 1, humanhuman

BASIC

Gene PCDHA1, Length 2,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-201ENST00000378133 GMCL1Q96IK5 515 aa17.92■□□□□ 0.46
PCDHA1-201ENST00000378133 CAMKK2Q96RR4 588 aa17.92■□□□□ 0.46
PCDHA1-201ENST00000378133 ELAC2Q9BQ52 826 aaKnown RBP17.92■□□□□ 0.46
PCDHA1-201ENST00000378133 AMFRQ9UKV5 643 aa17.92■□□□□ 0.46
PCDHA1-201ENST00000378133 INTUQ9ULD6 942 aa17.92■□□□□ 0.46
PCDHA1-201ENST00000378133 GAP43P17677 238 aa17.92■□□□□ 0.46
PCDHA1-201ENST00000378133 HMGB2P26583 209 aaKnown RBP17.92■□□□□ 0.46
PCDHA1-201ENST00000378133 FMO5P49326 533 aa17.92■□□□□ 0.46
PCDHA1-201ENST00000378133 RIPK1Q13546 671 aa17.92■□□□□ 0.46
PCDHA1-201ENST00000378133 LRRC34Q8IZ02 419 aa17.92■□□□□ 0.46
PCDHA1-201ENST00000378133 GMCL1P1Q8NEA9 526 aa17.92■□□□□ 0.46
PCDHA1-201ENST00000378133 OLIG1Q8TAK6 271 aa17.92■□□□□ 0.46
PCDHA1-201ENST00000378133 NR2E1Q9Y466 385 aa17.92■□□□□ 0.46
PCDHA1-201ENST00000378133 L3MBTL1Q9Y468 752 aa17.92■□□□□ 0.46
PCDHA1-201ENST00000378133 SIPA1L1O43166 1804 aa17.91■□□□□ 0.46
PCDHA1-201ENST00000378133 IGLV3-22A0A075B6J6 115 aa17.91■□□□□ 0.46
PCDHA1-201ENST00000378133 ANP32DO95626 131 aa17.91■□□□□ 0.46
PCDHA1-201ENST00000378133 GH2P01242 217 aa17.91■□□□□ 0.46
PCDHA1-201ENST00000378133 CYP2J2P51589 502 aa17.91■□□□□ 0.46
PCDHA1-201ENST00000378133 CBWD6Q4V339 395 aa17.91■□□□□ 0.46
PCDHA1-201ENST00000378133 CBWD3Q5JTY5 395 aa17.91■□□□□ 0.46
PCDHA1-201ENST00000378133 SPDYCQ5MJ68 293 aa17.91■□□□□ 0.46
PCDHA1-201ENST00000378133 CBWD5Q5RIA9 395 aa17.91■□□□□ 0.46
PCDHA1-201ENST00000378133 WDR18Q9BV38 432 aa17.91■□□□□ 0.46
PCDHA1-201ENST00000378133 IDI2Q9BXS1 227 aa17.91■□□□□ 0.46
PCDHA1-201ENST00000378133 STK33Q9BYT3 514 aa17.91■□□□□ 0.46
PCDHA1-201ENST00000378133 TXLNGYQ9BZA5 131 aa17.91■□□□□ 0.46
PCDHA1-201ENST00000378133 RAB17Q9H0T7 212 aa17.91■□□□□ 0.46
PCDHA1-201ENST00000378133 PPP1R9AQ9ULJ8 1098 aa17.91■□□□□ 0.46
PCDHA1-201ENST00000378133 CFBP00751 764 aa17.91■□□□□ 0.46
PCDHA1-201ENST00000378133 FGGP02679 453 aa17.91■□□□□ 0.46
PCDHA1-201ENST00000378133 TRIM49P0CI25 452 aa17.91■□□□□ 0.46
PCDHA1-201ENST00000378133 TRIM49CP0CI26 452 aa17.91■□□□□ 0.46
PCDHA1-201ENST00000378133 MMP13P45452 471 aa17.91■□□□□ 0.46
PCDHA1-201ENST00000378133 NPEPPSP55786 919 aa17.91■□□□□ 0.46
PCDHA1-201ENST00000378133 UBXN2AP68543 259 aa17.91■□□□□ 0.46
PCDHA1-201ENST00000378133 TRPM8Q7Z2W7 1104 aa17.91■□□□□ 0.46
PCDHA1-201ENST00000378133 ATXN2LQ8WWM7 1075 aaKnown RBP17.91■□□□□ 0.46
PCDHA1-201ENST00000378133 PARVGQ9HBI0 331 aa17.91■□□□□ 0.46
PCDHA1-201ENST00000378133 PRR12Q9ULL5 1215 aa17.91■□□□□ 0.46
PCDHA1-201ENST00000378133 A0A1W2PRG0 241 aa17.9■□□□□ 0.46
PCDHA1-201ENST00000378133 CFAP73A6NFT4 308 aa17.9■□□□□ 0.46
PCDHA1-201ENST00000378133 EIF3DO15371 548 aaKnown RBP eCLIP17.9■□□□□ 0.46
PCDHA1-201ENST00000378133 VIMP08670 466 aaKnown RBP17.9■□□□□ 0.46
PCDHA1-201ENST00000378133 CYP3A4P08684 503 aa17.9■□□□□ 0.46
PCDHA1-201ENST00000378133 NPR1P16066 1061 aa17.9■□□□□ 0.46
PCDHA1-201ENST00000378133 INHBEP58166 350 aa17.9■□□□□ 0.46
PCDHA1-201ENST00000378133 PRPF4BQ13523 1007 aaKnown RBP17.9■□□□□ 0.46
PCDHA1-201ENST00000378133 ADAT2Q7Z6V5 191 aaKnown RBP17.9■□□□□ 0.46
PCDHA1-201ENST00000378133 INTS9Q9NV88 658 aaKnown RBP17.9■□□□□ 0.46
PCDHA1-201ENST00000378133 IGSF9BQ9UPX0 1349 aa17.9■□□□□ 0.46
PCDHA1-201ENST00000378133 SMIM23A6NLE4 172 aa17.9■□□□□ 0.46
PCDHA1-201ENST00000378133 SKAP2O75563 359 aaPredicted RBP17.9■□□□□ 0.46
PCDHA1-201ENST00000378133 POU5F1Q01860 360 aaKnown RBP17.9■□□□□ 0.46
PCDHA1-201ENST00000378133 NAIF1Q69YI7 327 aaPredicted RBP17.9■□□□□ 0.46
PCDHA1-201ENST00000378133 PODNQ7Z5L7 613 aa17.9■□□□□ 0.46
PCDHA1-201ENST00000378133 RDH13Q8NBN7 331 aa17.9■□□□□ 0.46
PCDHA1-201ENST00000378133 ATP8B4Q8TF62 1192 aa17.9■□□□□ 0.46
PCDHA1-201ENST00000378133 PRMT1Q99873 361 aaKnown RBP17.9■□□□□ 0.46
PCDHA1-201ENST00000378133 TMX4Q9H1E5 349 aaPredicted RBP17.9■□□□□ 0.46
PCDHA1-201ENST00000378133 SEPT11Q9NVA2 429 aaKnown RBP17.9■□□□□ 0.46
PCDHA1-201ENST00000378133 CCDC169A6NNP5 214 aa17.89■□□□□ 0.45
PCDHA1-201ENST00000378133 LMNB1P20700 586 aa17.89■□□□□ 0.45
PCDHA1-201ENST00000378133 PMS2P54278 862 aa17.89■□□□□ 0.45
PCDHA1-201ENST00000378133 RRP1BQ14684 758 aaKnown RBP17.89■□□□□ 0.45
PCDHA1-201ENST00000378133 ARHGAP44Q17R89 818 aa17.89■□□□□ 0.45
PCDHA1-201ENST00000378133 DENND2CQ68D51 928 aa17.89■□□□□ 0.45
PCDHA1-201ENST00000378133 ZNF720Q7Z2F6 126 aa17.89■□□□□ 0.45
PCDHA1-201ENST00000378133 CCHCR1Q8TD31 782 aa17.89■□□□□ 0.45
PCDHA1-201ENST00000378133 PGM2Q96G03 612 aa17.89■□□□□ 0.45
PCDHA1-201ENST00000378133 GPR88Q9GZN0 384 aa17.89■□□□□ 0.45
PCDHA1-201ENST00000378133 ADAM7Q9H2U9 754 aa17.89■□□□□ 0.45
PCDHA1-201ENST00000378133 PABPC3Q9H361 631 aaKnown RBP17.89■□□□□ 0.45
PCDHA1-201ENST00000378133 BATF3Q9NR55 127 aa17.89■□□□□ 0.45
PCDHA1-201ENST00000378133 C15orf41Q9Y2V0 281 aa17.89■□□□□ 0.45
PCDHA1-201ENST00000378133 RGS16O15492 202 aaPredicted RBP17.89■□□□□ 0.45
PCDHA1-201ENST00000378133 NUDT17P0C025 328 aa17.89■□□□□ 0.45
PCDHA1-201ENST00000378133 ALDH1B1P30837 517 aa17.89■□□□□ 0.45
PCDHA1-201ENST00000378133 C11orf91Q3C1V1 193 aa17.89■□□□□ 0.45
PCDHA1-201ENST00000378133 FAM178BQ8IXR5 827 aa17.89■□□□□ 0.45
PCDHA1-201ENST00000378133 NEK9Q8TD19 979 aa17.89■□□□□ 0.45
PCDHA1-201ENST00000378133 CTNNBL1Q8WYA6 563 aaPredicted RBP17.89■□□□□ 0.45
PCDHA1-201ENST00000378133 RFFLQ8WZ73 363 aa17.89■□□□□ 0.45
PCDHA1-201ENST00000378133 FIZ1Q96SL8 496 aa17.89■□□□□ 0.45
PCDHA1-201ENST00000378133 TUFT1Q9NNX1 390 aa17.89■□□□□ 0.45
PCDHA1-201ENST00000378133 TAS2R14Q9NYV8 317 aa17.89■□□□□ 0.45
PCDHA1-201ENST00000378133 ATP8B3O60423 1300 aa17.88■□□□□ 0.45
PCDHA1-201ENST00000378133 PSMD10O75832 226 aa17.88■□□□□ 0.45
PCDHA1-201ENST00000378133 COPB2P35606 906 aa17.88■□□□□ 0.45
PCDHA1-201ENST00000378133 IFI35P80217 286 aaPredicted RBP17.88■□□□□ 0.45
PCDHA1-201ENST00000378133 DR1Q01658 176 aa17.88■□□□□ 0.45
PCDHA1-201ENST00000378133 SLC15A2Q16348 729 aa17.88■□□□□ 0.45
PCDHA1-201ENST00000378133 DCAF12L1Q5VU92 463 aa17.88■□□□□ 0.45
PCDHA1-201ENST00000378133 HS2ST1Q7LGA3 356 aa17.88■□□□□ 0.45
PCDHA1-201ENST00000378133 ARHGEF26Q96DR7 871 aa17.88■□□□□ 0.45
PCDHA1-201ENST00000378133 EPB41L4BQ9H329 900 aa17.88■□□□□ 0.45
PCDHA1-201ENST00000378133 AZI2Q9H6S1 392 aa17.88■□□□□ 0.45
PCDHA1-201ENST00000378133 TDRD3Q9H7E2 651 aaKnown RBP17.88■□□□□ 0.45
PCDHA1-201ENST00000378133 WRAP73Q9P2S5 460 aaPredicted RBP17.88■□□□□ 0.45
PCDHA1-201ENST00000378133 FRMD4BQ9Y2L6 1034 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms