RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 CENPCQ03188 943 aa9.36□□□□□ -0.91
PCDH9-202ENST00000377865 GRB10Q13322 594 aa9.36□□□□□ -0.91
PCDH9-202ENST00000377865 ZYXQ15942 572 aaKnown RBP9.36□□□□□ -0.91
PCDH9-202ENST00000377865 TMEM179Q6ZVK1 233 aa9.36□□□□□ -0.91
PCDH9-202ENST00000377865 PDZD4Q76G19 769 aaPredicted RBP9.36□□□□□ -0.91
PCDH9-202ENST00000377865 ATP11CQ8NB49 1132 aa9.36□□□□□ -0.91
PCDH9-202ENST00000377865 TIPINQ9BVW5 301 aa9.36□□□□□ -0.91
PCDH9-202ENST00000377865 DNAJC17Q9NVM6 304 aaKnown RBP9.36□□□□□ -0.91
PCDH9-202ENST00000377865 PI4KBQ9UBF8 816 aa9.36□□□□□ -0.91
PCDH9-202ENST00000377865 PEAK1Q9H792 1746 aa9.36□□□□□ -0.91
PCDH9-202ENST00000377865 JAK3P52333 1124 aa9.36□□□□□ -0.91
PCDH9-202ENST00000377865 COG7P83436 770 aa9.36□□□□□ -0.91
PCDH9-202ENST00000377865 RASA3Q14644 834 aa9.36□□□□□ -0.91
PCDH9-202ENST00000377865 NSMFQ6X4W1 530 aa9.36□□□□□ -0.91
PCDH9-202ENST00000377865 LONP2Q86WA8 852 aa9.36□□□□□ -0.91
PCDH9-202ENST00000377865 NBPF3Q9H094 633 aa9.36□□□□□ -0.91
PCDH9-202ENST00000377865 CNOT7Q9UIV1 285 aaKnown RBP9.36□□□□□ -0.91
PCDH9-202ENST00000377865 TESPA1A2RU30 521 aaPredicted RBP9.35□□□□□ -0.91
PCDH9-202ENST00000377865 FAM47DPA6NHR8 397 aa9.35□□□□□ -0.91
PCDH9-202ENST00000377865 FGFR2P21802 821 aa9.35□□□□□ -0.91
PCDH9-202ENST00000377865 SCNN1DP51172 638 aa9.35□□□□□ -0.91
PCDH9-202ENST00000377865 KLC1Q07866 573 aa9.35□□□□□ -0.91
PCDH9-202ENST00000377865 DARS2Q6PI48 645 aaKnown RBP9.35□□□□□ -0.91
PCDH9-202ENST00000377865 STAMBPL1Q96FJ0 436 aa9.35□□□□□ -0.91
PCDH9-202ENST00000377865 EIF2AK1Q9BQI3 630 aaKnown RBP9.35□□□□□ -0.91
PCDH9-202ENST00000377865 FAM217BQ9NTX9 383 aaPredicted RBP9.35□□□□□ -0.91
PCDH9-202ENST00000377865 GINM1Q9NU53 330 aa9.35□□□□□ -0.91
PCDH9-202ENST00000377865 TMOD4Q9NZQ9 345 aa9.35□□□□□ -0.91
PCDH9-202ENST00000377865 ANKFY1Q9P2R3 1169 aa9.35□□□□□ -0.91
PCDH9-202ENST00000377865 SPEF2Q9C093 1822 aa9.35□□□□□ -0.91
PCDH9-202ENST00000377865 USP17L10C9JJH3 530 aa9.35□□□□□ -0.91
PCDH9-202ENST00000377865 H0Y3Z8 333 aa9.35□□□□□ -0.91
PCDH9-202ENST00000377865 UBE2Q2LH0YL09 131 aa9.35□□□□□ -0.91
PCDH9-202ENST00000377865 CCDC22O60826 627 aa9.35□□□□□ -0.91
PCDH9-202ENST00000377865 CRCPO75575 148 aa9.35□□□□□ -0.91
PCDH9-202ENST00000377865 GLI1P08151 1106 aa9.35□□□□□ -0.91
PCDH9-202ENST00000377865 POLGP54098 1239 aaPredicted RBP9.35□□□□□ -0.91
PCDH9-202ENST00000377865 SNRPFP62306 86 aaKnown RBP9.35□□□□□ -0.91
PCDH9-202ENST00000377865 BASP1P80723 227 aaKnown RBP9.35□□□□□ -0.91
PCDH9-202ENST00000377865 C16orf86Q6ZW13 317 aa9.35□□□□□ -0.91
PCDH9-202ENST00000377865 LRRC34Q8IZ02 419 aa9.35□□□□□ -0.91
PCDH9-202ENST00000377865 CENPTQ96BT3 561 aa9.35□□□□□ -0.91
PCDH9-202ENST00000377865 ALKBH8Q96BT7 664 aaKnown RBP9.35□□□□□ -0.91
PCDH9-202ENST00000377865 DYDC2Q96IM9 177 aa9.35□□□□□ -0.91
PCDH9-202ENST00000377865 DDX23Q9BUQ8 820 aaKnown RBP9.35□□□□□ -0.91
PCDH9-202ENST00000377865 NDE1Q9NXR1 346 aa9.35□□□□□ -0.91
PCDH9-202ENST00000377865 SSX2IPQ9Y2D8 614 aa9.35□□□□□ -0.91
PCDH9-202ENST00000377865 A0A087X0B3 334 aa9.35□□□□□ -0.91
PCDH9-202ENST00000377865 SNAP23O00161 211 aa9.35□□□□□ -0.91
PCDH9-202ENST00000377865 TMEM191BP0C7N4 346 aa9.35□□□□□ -0.91
PCDH9-202ENST00000377865 TAP1Q03518 808 aa9.35□□□□□ -0.91
PCDH9-202ENST00000377865 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.35□□□□□ -0.91
PCDH9-202ENST00000377865 TTMPQ5BVD1 217 aa9.35□□□□□ -0.91
PCDH9-202ENST00000377865 DAB2IPQ5VWQ8 1189 aa9.35□□□□□ -0.91
PCDH9-202ENST00000377865 SLFN12LQ6IEE8 588 aa9.35□□□□□ -0.91
PCDH9-202ENST00000377865 KCTD6Q8NC69 237 aa9.35□□□□□ -0.91
PCDH9-202ENST00000377865 CCT6BQ92526 530 aa9.35□□□□□ -0.91
PCDH9-202ENST00000377865 COA1Q9GZY4 146 aa9.35□□□□□ -0.91
PCDH9-202ENST00000377865 TRABDQ9H4I3 376 aa9.35□□□□□ -0.91
PCDH9-202ENST00000377865 MAD1L1Q9Y6D9 718 aa9.35□□□□□ -0.91
PCDH9-202ENST00000377865 MEGF6O75095 1541 aa9.35□□□□□ -0.91
PCDH9-202ENST00000377865 TMEM120BA0PK00 339 aa9.35□□□□□ -0.91
PCDH9-202ENST00000377865 WDR91A4D1P6 747 aa9.35□□□□□ -0.91
PCDH9-202ENST00000377865 LDHAP00338 332 aaKnown RBP9.35□□□□□ -0.91
PCDH9-202ENST00000377865 MAPK7Q13164 816 aa9.35□□□□□ -0.91
PCDH9-202ENST00000377865 SF3B3Q15393 1217 aaKnown RBP9.35□□□□□ -0.91
PCDH9-202ENST00000377865 RCSD1Q6JBY9 416 aa9.35□□□□□ -0.91
PCDH9-202ENST00000377865 SLC30A9Q6PML9 568 aa9.35□□□□□ -0.91
PCDH9-202ENST00000377865 DDX42Q86XP3 938 aaKnown RBP eCLIP9.35□□□□□ -0.91
PCDH9-202ENST00000377865 SPATA20Q8TB22 786 aa9.35□□□□□ -0.91
PCDH9-202ENST00000377865 ZNF507Q8TCN5 953 aa9.35□□□□□ -0.91
PCDH9-202ENST00000377865 MAGEB18Q96M61 343 aa9.35□□□□□ -0.91
PCDH9-202ENST00000377865 NPHP3-ACAD11A0A0J9YXS1 232 aa9.34□□□□□ -0.91
PCDH9-202ENST00000377865 PABPN1LA6NDY0 278 aaKnown RBP9.34□□□□□ -0.91
PCDH9-202ENST00000377865 ZNF233A6NK53 670 aa9.34□□□□□ -0.91
PCDH9-202ENST00000377865 BMP6P22004 513 aa9.34□□□□□ -0.91
PCDH9-202ENST00000377865 COILP38432 576 aaPredicted RBP9.34□□□□□ -0.91
PCDH9-202ENST00000377865 LONRF1Q17RB8 773 aa9.34□□□□□ -0.91
PCDH9-202ENST00000377865 BBS9Q3SYG4 887 aa9.34□□□□□ -0.91
PCDH9-202ENST00000377865 BARGINQ6ZT62 677 aa9.34□□□□□ -0.91
PCDH9-202ENST00000377865 ANKRD36BP1Q96IX9 119 aa9.34□□□□□ -0.91
PCDH9-202ENST00000377865 CPVLQ9H3G5 476 aa9.34□□□□□ -0.91
PCDH9-202ENST00000377865 ADAM22Q9P0K1 906 aa9.34□□□□□ -0.91
PCDH9-202ENST00000377865 NAGPAQ9UK23 515 aa9.34□□□□□ -0.91
PCDH9-202ENST00000377865 SFI1A8K8P3 1242 aa9.34□□□□□ -0.91
PCDH9-202ENST00000377865 STAT3P40763 770 aa9.34□□□□□ -0.91
PCDH9-202ENST00000377865 FSCBQ5H9T9 825 aa9.34□□□□□ -0.91
PCDH9-202ENST00000377865 TRIM50Q86XT4 487 aa9.34□□□□□ -0.91
PCDH9-202ENST00000377865 WDR75Q8IWA0 830 aaKnown RBP9.34□□□□□ -0.91
PCDH9-202ENST00000377865 CPXCR1Q8N123 301 aa9.34□□□□□ -0.91
PCDH9-202ENST00000377865 SLC44A5Q8NCS7 719 aa9.34□□□□□ -0.91
PCDH9-202ENST00000377865 CFAP36Q96G28 342 aa9.34□□□□□ -0.91
PCDH9-202ENST00000377865 PICK1Q9NRD5 415 aa9.34□□□□□ -0.91
PCDH9-202ENST00000377865 F8VZ95 297 aa9.34□□□□□ -0.91
PCDH9-202ENST00000377865 LPXNO60711 386 aa9.34□□□□□ -0.91
PCDH9-202ENST00000377865 PPFIA2O75334 1257 aa9.34□□□□□ -0.91
PCDH9-202ENST00000377865 TBXAS1P24557 533 aaPredicted RBP9.34□□□□□ -0.91
PCDH9-202ENST00000377865 GCLMP48507 274 aa9.34□□□□□ -0.91
PCDH9-202ENST00000377865 MIS18BP1Q6P0N0 1132 aa9.34□□□□□ -0.91
PCDH9-202ENST00000377865 PADI6Q6TGC4 694 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms