RNA–Protein interactions for RNA: ENST00000377011.6

VRK3-202, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-202ENST00000377011 KIZQ2M2Z5 673 aa13.63□□□□□ -0.23
VRK3-202ENST00000377011 ERCC6LQ2NKX8 1250 aa13.63□□□□□ -0.23
VRK3-202ENST00000377011 MTERF2Q49AM1 385 aa13.63□□□□□ -0.23
VRK3-202ENST00000377011 PDILTQ8N807 584 aa13.63□□□□□ -0.23
VRK3-202ENST00000377011 TIFAQ96CG3 184 aa13.63□□□□□ -0.23
VRK3-202ENST00000377011 CERS4Q9HA82 394 aa13.63□□□□□ -0.23
VRK3-202ENST00000377011 SEPT9Q9UHD8 586 aaPredicted RBP13.63□□□□□ -0.23
VRK3-202ENST00000377011 TCEAL9Q9UHQ7 104 aa13.63□□□□□ -0.23
VRK3-202ENST00000377011 COL4A6Q14031 1691 aa13.63□□□□□ -0.23
VRK3-202ENST00000377011 A0A087X0B3 334 aa13.62□□□□□ -0.23
VRK3-202ENST00000377011 EPOPA6NHQ4 379 aa13.62□□□□□ -0.23
VRK3-202ENST00000377011 RFXAPO00287 272 aa13.62□□□□□ -0.23
VRK3-202ENST00000377011 TBX3O15119 743 aa13.62□□□□□ -0.23
VRK3-202ENST00000377011 GTPBP6O43824 516 aaPredicted RBP13.62□□□□□ -0.23
VRK3-202ENST00000377011 GPR32O75388 356 aa13.62□□□□□ -0.23
VRK3-202ENST00000377011 LONP1P36776 959 aaKnown RBP13.62□□□□□ -0.23
VRK3-202ENST00000377011 EFCAB12Q6NXP0 572 aa13.62□□□□□ -0.23
VRK3-202ENST00000377011 USP49Q70CQ1 688 aa13.62□□□□□ -0.23
VRK3-202ENST00000377011 PPFIBP1Q86W92 1011 aa13.62□□□□□ -0.23
VRK3-202ENST00000377011 CNGA4Q8IV77 575 aa13.62□□□□□ -0.23
VRK3-202ENST00000377011 HERC6Q8IVU3 1022 aa13.62□□□□□ -0.23
VRK3-202ENST00000377011 METTL13Q8N6R0 699 aa13.62□□□□□ -0.23
VRK3-202ENST00000377011 LXNQ9BS40 222 aa13.62□□□□□ -0.23
VRK3-202ENST00000377011 SAMSN1Q9NSI8 373 aaKnown RBP13.62□□□□□ -0.23
VRK3-202ENST00000377011 ARID2Q68CP9 1835 aa13.62□□□□□ -0.23
VRK3-202ENST00000377011 COL1A2P08123 1366 aa13.62□□□□□ -0.23
VRK3-202ENST00000377011 LRRC10BA6NIK2 292 aa13.61□□□□□ -0.23
VRK3-202ENST00000377011 PPP1R3GB7ZBB8 358 aa13.61□□□□□ -0.23
VRK3-202ENST00000377011 MGEA5O60502 916 aa13.61□□□□□ -0.23
VRK3-202ENST00000377011 CAND2O75155 1236 aa13.61□□□□□ -0.23
VRK3-202ENST00000377011 CSDE1O75534 798 aaKnown RBP13.61□□□□□ -0.23
VRK3-202ENST00000377011 URI1O94763 535 aaPredicted RBP13.61□□□□□ -0.23
VRK3-202ENST00000377011 MYL1P05976 194 aa13.61□□□□□ -0.23
VRK3-202ENST00000377011 CA3P07451 260 aa13.61□□□□□ -0.23
VRK3-202ENST00000377011 EPHA7Q15375 998 aa13.61□□□□□ -0.23
VRK3-202ENST00000377011 TERF2Q15554 542 aa13.61□□□□□ -0.23
VRK3-202ENST00000377011 ECM1Q16610 540 aa13.61□□□□□ -0.23
VRK3-202ENST00000377011 ARHGAP29Q52LW3 1261 aa13.61□□□□□ -0.23
VRK3-202ENST00000377011 GPR153Q6NV75 609 aa13.61□□□□□ -0.23
VRK3-202ENST00000377011 ZNF771Q7L3S4 317 aaPredicted RBP13.61□□□□□ -0.23
VRK3-202ENST00000377011 KSR1Q8IVT5 923 aa13.61□□□□□ -0.23
VRK3-202ENST00000377011 GRAMD1CQ8IYS0 662 aa13.61□□□□□ -0.23
VRK3-202ENST00000377011 RDM1Q8NG50 284 aa13.61□□□□□ -0.23
VRK3-202ENST00000377011 MYLIPQ8WY64 445 aa13.61□□□□□ -0.23
VRK3-202ENST00000377011 EPSTI1Q96J88 318 aa13.61□□□□□ -0.23
VRK3-202ENST00000377011 CDX2Q99626 313 aaPredicted RBP13.61□□□□□ -0.23
VRK3-202ENST00000377011 OSMRQ99650 979 aa13.61□□□□□ -0.23
VRK3-202ENST00000377011 HSD17B14Q9BPX1 270 aa13.61□□□□□ -0.23
VRK3-202ENST00000377011 EIF2AK1Q9BQI3 630 aaKnown RBP13.61□□□□□ -0.23
VRK3-202ENST00000377011 NIFKQ9BYG3 293 aaKnown RBP13.61□□□□□ -0.23
VRK3-202ENST00000377011 IFIH1Q9BYX4 1025 aaKnown RBP13.61□□□□□ -0.23
VRK3-202ENST00000377011 CELF4Q9BZC1 486 aaKnown RBP13.61□□□□□ -0.23
VRK3-202ENST00000377011 ZNF576Q9H609 170 aa13.61□□□□□ -0.23
VRK3-202ENST00000377011 SUGCTQ9HAC7 445 aa13.61□□□□□ -0.23
VRK3-202ENST00000377011 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.61□□□□□ -0.23
VRK3-202ENST00000377011 LIMA1Q9UHB6 759 aaKnown RBP13.61□□□□□ -0.23
VRK3-202ENST00000377011 RWDD2AQ9UIY3 292 aa13.61□□□□□ -0.23
VRK3-202ENST00000377011 NOC2LQ9Y3T9 749 aaKnown RBP13.61□□□□□ -0.23
VRK3-202ENST00000377011 TRPV2Q9Y5S1 764 aa13.61□□□□□ -0.23
VRK3-202ENST00000377011 V9GYY5 206 aaPredicted RBP13.61□□□□□ -0.23
VRK3-202ENST00000377011 MED24O75448 989 aa13.61□□□□□ -0.23
VRK3-202ENST00000377011 SPATA31C1P0DKV0 1188 aa13.61□□□□□ -0.23
VRK3-202ENST00000377011 ACTN1P12814 892 aa13.61□□□□□ -0.23
VRK3-202ENST00000377011 FGFR4P22455 802 aa13.61□□□□□ -0.23
VRK3-202ENST00000377011 TXLNAP40222 546 aa13.61□□□□□ -0.23
VRK3-202ENST00000377011 TECP42680 631 aa13.61□□□□□ -0.23
VRK3-202ENST00000377011 QARSP47897 775 aaKnown RBP13.61□□□□□ -0.23
VRK3-202ENST00000377011 PSMC5P62195 406 aa13.61□□□□□ -0.23
VRK3-202ENST00000377011 PTGDRQ13258 359 aa13.61□□□□□ -0.23
VRK3-202ENST00000377011 ZNF697Q5TEC3 545 aa13.61□□□□□ -0.23
VRK3-202ENST00000377011 MYOCDQ8IZQ8 938 aa13.61□□□□□ -0.23
VRK3-202ENST00000377011 GPR161Q8N6U8 529 aaKnown RBP13.61□□□□□ -0.23
VRK3-202ENST00000377011 ANKRD20A12PQ8NF67 263 aa13.61□□□□□ -0.23
VRK3-202ENST00000377011 ADAMTS10Q9H324 1103 aa13.61□□□□□ -0.23
VRK3-202ENST00000377011 PCDHA12Q9UN75 941 aa13.61□□□□□ -0.23
VRK3-202ENST00000377011 MRFAP1Q9Y605 127 aa13.61□□□□□ -0.23
VRK3-202ENST00000377011 PP2D1A8MPX8 630 aa13.6□□□□□ -0.23
VRK3-202ENST00000377011 MARCH6O60337 910 aa13.6□□□□□ -0.23
VRK3-202ENST00000377011 MFAP3LO75121 409 aa13.6□□□□□ -0.23
VRK3-202ENST00000377011 BAIAP3O94812 1187 aa13.6□□□□□ -0.23
VRK3-202ENST00000377011 P4HBP07237 508 aaKnown RBP13.6□□□□□ -0.23
VRK3-202ENST00000377011 CLCN6P51797 869 aa13.6□□□□□ -0.23
VRK3-202ENST00000377011 GNG11P61952 73 aa13.6□□□□□ -0.23
VRK3-202ENST00000377011 IKBKEQ14164 716 aa13.6□□□□□ -0.23
VRK3-202ENST00000377011 ADGRE1Q14246 886 aa13.6□□□□□ -0.23
VRK3-202ENST00000377011 XKR3Q5GH77 459 aa13.6□□□□□ -0.23
VRK3-202ENST00000377011 TPH2Q8IWU9 490 aa13.6□□□□□ -0.23
VRK3-202ENST00000377011 IGSF22Q8N9C0 903 aa13.6□□□□□ -0.23
VRK3-202ENST00000377011 NRBP2Q9NSY0 501 aa13.6□□□□□ -0.23
VRK3-202ENST00000377011 PADI3Q9ULW8 664 aa13.6□□□□□ -0.23
VRK3-202ENST00000377011 TTC3P53804 2025 aa13.59□□□□□ -0.23
VRK3-202ENST00000377011 IGKV6-21A0A0C4DH24 114 aa13.59□□□□□ -0.23
VRK3-202ENST00000377011 ABHD14A-ACY1A0A1B0GW23 586 aa13.59□□□□□ -0.23
VRK3-202ENST00000377011 LAD1O00515 517 aa13.59□□□□□ -0.23
VRK3-202ENST00000377011 UPP2O95045 317 aa13.59□□□□□ -0.23
VRK3-202ENST00000377011 ZRANB2O95218 330 aaKnown RBP eCLIP13.59□□□□□ -0.23
VRK3-202ENST00000377011 OR52Z1P0C646 297 aa13.59□□□□□ -0.23
VRK3-202ENST00000377011 CD44P16070 742 aaKnown RBP13.59□□□□□ -0.23
VRK3-202ENST00000377011 CDC25AP30304 524 aa13.59□□□□□ -0.23
VRK3-202ENST00000377011 AFMP43652 599 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms