RNA–Protein interactions for RNA: ENST00000376724.6

TRIM40-206, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TRIM40, Length 2,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-206ENST00000376724 TMEM174Q8WUU8 243 aa14.07□□□□□ -0.16
TRIM40-206ENST00000376724 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.07□□□□□ -0.16
TRIM40-206ENST00000376724 IFIH1Q9BYX4 1025 aaKnown RBP14.07□□□□□ -0.16
TRIM40-206ENST00000376724 LACRTQ9GZZ8 138 aa14.07□□□□□ -0.16
TRIM40-206ENST00000376724 INTS2Q9H0H0 1204 aaKnown RBP14.07□□□□□ -0.16
TRIM40-206ENST00000376724 SMARCAD1Q9H4L7 1026 aa14.07□□□□□ -0.16
TRIM40-206ENST00000376724 HAUS4Q9H6D7 363 aa14.07□□□□□ -0.16
TRIM40-206ENST00000376724 VTA1Q9NP79 307 aa14.07□□□□□ -0.16
TRIM40-206ENST00000376724 KCNG1Q9UIX4 513 aa14.07□□□□□ -0.16
TRIM40-206ENST00000376724 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.06□□□□□ -0.16
TRIM40-206ENST00000376724 KRT86O43790 486 aa14.06□□□□□ -0.16
TRIM40-206ENST00000376724 SNAI1O95863 264 aaPredicted RBP14.06□□□□□ -0.16
TRIM40-206ENST00000376724 PNMA6AP0CW24 399 aaPredicted RBP14.06□□□□□ -0.16
TRIM40-206ENST00000376724 MAPK4P31152 587 aa14.06□□□□□ -0.16
TRIM40-206ENST00000376724 ARHGAP1Q07960 439 aa14.06□□□□□ -0.16
TRIM40-206ENST00000376724 BRDTQ58F21 947 aaPredicted RBP14.06□□□□□ -0.16
TRIM40-206ENST00000376724 PRPF31Q8WWY3 499 aaKnown RBP14.06□□□□□ -0.16
TRIM40-206ENST00000376724 MAML3Q96JK9 1138 aa14.06□□□□□ -0.16
TRIM40-206ENST00000376724 AIPL1Q9NZN9 384 aa14.06□□□□□ -0.16
TRIM40-206ENST00000376724 PCDHA13Q9Y5I0 950 aa14.06□□□□□ -0.16
TRIM40-206ENST00000376724 DUSP10Q9Y6W6 482 aa14.06□□□□□ -0.16
TRIM40-206ENST00000376724 SSU72P8A0A1W2PR75 194 aa14.05□□□□□ -0.16
TRIM40-206ENST00000376724 GH1P01241 217 aa14.05□□□□□ -0.16
TRIM40-206ENST00000376724 VAV2P52735 878 aa14.05□□□□□ -0.16
TRIM40-206ENST00000376724 MAPK8IP2Q13387 824 aaPredicted RBP14.05□□□□□ -0.16
TRIM40-206ENST00000376724 LAMC2Q13753 1193 aa14.05□□□□□ -0.16
TRIM40-206ENST00000376724 CAPSQ13938 189 aa14.05□□□□□ -0.16
TRIM40-206ENST00000376724 TAF1CQ15572 869 aaPredicted RBP14.05□□□□□ -0.16
TRIM40-206ENST00000376724 C1orf220Q5T0J3 134 aa14.05□□□□□ -0.16
TRIM40-206ENST00000376724 NPLOC4Q8TAT6 608 aa14.05□□□□□ -0.16
TRIM40-206ENST00000376724 ZBTB10Q96DT7 871 aa14.05□□□□□ -0.16
TRIM40-206ENST00000376724 POP1Q99575 1024 aaKnown RBP14.05□□□□□ -0.16
TRIM40-206ENST00000376724 FAM213AQ9BRX8 229 aa14.05□□□□□ -0.16
TRIM40-206ENST00000376724 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.05□□□□□ -0.16
TRIM40-206ENST00000376724 DNAJC12Q9UKB3 198 aa14.05□□□□□ -0.16
TRIM40-206ENST00000376724 ZNF215Q9UL58 517 aaPredicted RBP14.05□□□□□ -0.16
TRIM40-206ENST00000376724 MACROD2A1Z1Q3 448 aa14.05□□□□□ -0.16
TRIM40-206ENST00000376724 ZBTB42B2RXF5 422 aa14.05□□□□□ -0.16
TRIM40-206ENST00000376724 MAPK13O15264 365 aa14.05□□□□□ -0.16
TRIM40-206ENST00000376724 LRRN2O75325 713 aa14.05□□□□□ -0.16
TRIM40-206ENST00000376724 SLU7O95391 586 aaKnown RBP14.05□□□□□ -0.16
TRIM40-206ENST00000376724 SRGAP2CP0DJJ0 459 aa14.05□□□□□ -0.16
TRIM40-206ENST00000376724 MATR3P43243 847 aaKnown RBP eCLIP14.05□□□□□ -0.16
TRIM40-206ENST00000376724 IGBP1P78318 339 aa14.05□□□□□ -0.16
TRIM40-206ENST00000376724 KIF5AQ12840 1032 aa14.05□□□□□ -0.16
TRIM40-206ENST00000376724 ASTE1Q2TB18 679 aaPredicted RBP14.05□□□□□ -0.16
TRIM40-206ENST00000376724 MAMDC4Q6UXC1 1216 aa14.05□□□□□ -0.16
TRIM40-206ENST00000376724 ZNF467Q7Z7K2 595 aaPredicted RBP14.05□□□□□ -0.16
TRIM40-206ENST00000376724 SAPCD2Q86UD0 394 aa14.05□□□□□ -0.16
TRIM40-206ENST00000376724 GPD1LQ8N335 351 aa14.05□□□□□ -0.16
TRIM40-206ENST00000376724 EHBP1Q8NDI1 1231 aa14.05□□□□□ -0.16
TRIM40-206ENST00000376724 AFG1LQ8WV93 481 aa14.05□□□□□ -0.16
TRIM40-206ENST00000376724 ZNF668Q96K58 619 aaPredicted RBP14.05□□□□□ -0.16
TRIM40-206ENST00000376724 RNPEPQ9H4A4 650 aa14.05□□□□□ -0.16
TRIM40-206ENST00000376724 L2HGDHQ9H9P8 463 aa14.05□□□□□ -0.16
TRIM40-206ENST00000376724 ZHX1Q9UKY1 873 aaPredicted RBP14.05□□□□□ -0.16
TRIM40-206ENST00000376724 DCAF8L1A6NGE4 600 aa14.04□□□□□ -0.16
TRIM40-206ENST00000376724 MANSC4A6NHS7 340 aaPredicted RBP14.04□□□□□ -0.16
TRIM40-206ENST00000376724 GARTP22102 1010 aa14.04□□□□□ -0.16
TRIM40-206ENST00000376724 ABCD1P33897 745 aa14.04□□□□□ -0.16
TRIM40-206ENST00000376724 MAGEA1P43355 309 aa14.04□□□□□ -0.16
TRIM40-206ENST00000376724 MAP2K1Q02750 393 aaPredicted RBP14.04□□□□□ -0.16
TRIM40-206ENST00000376724 CETN1Q12798 172 aa14.04□□□□□ -0.16
TRIM40-206ENST00000376724 MKRN4PQ13434 485 aaPredicted RBP14.04□□□□□ -0.16
TRIM40-206ENST00000376724 NAA30Q147X3 362 aaPredicted RBP14.04□□□□□ -0.16
TRIM40-206ENST00000376724 ARHGAP44Q17R89 818 aa14.04□□□□□ -0.16
TRIM40-206ENST00000376724 RGMBQ6NW40 437 aa14.04□□□□□ -0.16
TRIM40-206ENST00000376724 IRF2BP2Q7Z5L9 587 aa14.04□□□□□ -0.16
TRIM40-206ENST00000376724 METTL13Q8N6R0 699 aa14.04□□□□□ -0.16
TRIM40-206ENST00000376724 ZBTB45Q96K62 511 aaPredicted RBP14.04□□□□□ -0.16
TRIM40-206ENST00000376724 TINF2Q9BSI4 451 aa14.04□□□□□ -0.16
TRIM40-206ENST00000376724 KATNBL1Q9H079 304 aa14.04□□□□□ -0.16
TRIM40-206ENST00000376724 TMEM117Q9H0C3 514 aa14.04□□□□□ -0.16
TRIM40-206ENST00000376724 ERAP1Q9NZ08 941 aa14.04□□□□□ -0.16
TRIM40-206ENST00000376724 ANKFY1Q9P2R3 1169 aa14.04□□□□□ -0.16
TRIM40-206ENST00000376724 APEX2Q9UBZ4 518 aa14.04□□□□□ -0.16
TRIM40-206ENST00000376724 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.04□□□□□ -0.16
TRIM40-206ENST00000376724 ADAMTS1Q9UHI8 967 aa14.04□□□□□ -0.16
TRIM40-206ENST00000376724 FBXL5Q9UKA1 691 aa14.04□□□□□ -0.16
TRIM40-206ENST00000376724 V9GYY5 206 aaPredicted RBP14.04□□□□□ -0.16
TRIM40-206ENST00000376724 CTAGE9A4FU28 777 aa14.03□□□□□ -0.16
TRIM40-206ENST00000376724 CTIFO43310 598 aaKnown RBP14.03□□□□□ -0.16
TRIM40-206ENST00000376724 N4BP1O75113 896 aaKnown RBP14.03□□□□□ -0.16
TRIM40-206ENST00000376724 GFPT2O94808 682 aa14.03□□□□□ -0.16
TRIM40-206ENST00000376724 LCA5LO95447 670 aa14.03□□□□□ -0.16
TRIM40-206ENST00000376724 LGALS2P05162 132 aa14.03□□□□□ -0.16
TRIM40-206ENST00000376724 ZNF286BP0CG31 522 aa14.03□□□□□ -0.16
TRIM40-206ENST00000376724 DLATP10515 647 aaKnown RBP14.03□□□□□ -0.16
TRIM40-206ENST00000376724 SLC26A2P50443 739 aa14.03□□□□□ -0.16
TRIM40-206ENST00000376724 MXI1P50539 228 aa14.03□□□□□ -0.16
TRIM40-206ENST00000376724 JAM2P57087 298 aa14.03□□□□□ -0.16
TRIM40-206ENST00000376724 PTK2Q05397 1052 aa14.03□□□□□ -0.16
TRIM40-206ENST00000376724 LAMTOR4Q0VGL1 99 aa14.03□□□□□ -0.16
TRIM40-206ENST00000376724 DRAP1Q14919 205 aaPredicted RBP14.03□□□□□ -0.16
TRIM40-206ENST00000376724 IER5Q5VY09 327 aa14.03□□□□□ -0.16
TRIM40-206ENST00000376724 RHPN2Q8IUC4 686 aa14.03□□□□□ -0.16
TRIM40-206ENST00000376724 PARD3BQ8TEW8 1205 aa14.03□□□□□ -0.16
TRIM40-206ENST00000376724 PSPC1Q8WXF1 523 aaKnown RBP14.03□□□□□ -0.16
TRIM40-206ENST00000376724 TARS2Q9BW92 718 aaKnown RBP14.03□□□□□ -0.16
TRIM40-206ENST00000376724 TOPORSQ9NS56 1045 aaPredicted RBP14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms