RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 EDAQ92838 391 aa23.44■■□□□ 1.34
VSX1-201ENST00000376707 IGSF21Q96ID5 467 aa23.44■■□□□ 1.34
VSX1-201ENST00000376707 HSD17B14Q9BPX1 270 aa23.44■■□□□ 1.34
VSX1-201ENST00000376707 RSAD1Q9HA92 442 aa23.44■■□□□ 1.34
VSX1-201ENST00000376707 ANKEF1Q9NU02 776 aa23.44■■□□□ 1.34
VSX1-201ENST00000376707 C5orf42Q9H799 3197 aa23.44■■□□□ 1.34
VSX1-201ENST00000376707 CNTNAP2Q9UHC6 1331 aa23.43■■□□□ 1.34
VSX1-201ENST00000376707 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP23.43■■□□□ 1.34
VSX1-201ENST00000376707 CLASP2O75122 1294 aaKnown RBP23.43■■□□□ 1.34
VSX1-201ENST00000376707 TFDP1Q14186 410 aa23.43■■□□□ 1.34
VSX1-201ENST00000376707 SAFBQ15424 915 aaKnown RBP eCLIP23.43■■□□□ 1.34
VSX1-201ENST00000376707 UBXN11Q5T124 520 aa23.43■■□□□ 1.34
VSX1-201ENST00000376707 DDX53Q86TM3 631 aaKnown RBP23.43■■□□□ 1.34
VSX1-201ENST00000376707 ZBP1Q9H171 429 aa23.43■■□□□ 1.34
VSX1-201ENST00000376707 XPNPEP1Q9NQW7 623 aa23.43■■□□□ 1.34
VSX1-201ENST00000376707 DNAJB4Q9UDY4 337 aa23.43■■□□□ 1.34
VSX1-201ENST00000376707 LIMCH1Q9UPQ0 1083 aa23.43■■□□□ 1.34
VSX1-201ENST00000376707 WNT7AO00755 349 aa23.42■■□□□ 1.34
VSX1-201ENST00000376707 DGAT1O75907 488 aa23.42■■□□□ 1.34
VSX1-201ENST00000376707 SLC11A1P49279 550 aa23.42■■□□□ 1.34
VSX1-201ENST00000376707 NCBP1Q09161 790 aaKnown RBP23.42■■□□□ 1.34
VSX1-201ENST00000376707 PCBP1Q15365 356 aaKnown RBP eCLIP23.42■■□□□ 1.34
VSX1-201ENST00000376707 HFE2Q6ZVN8 426 aa23.42■■□□□ 1.34
VSX1-201ENST00000376707 ZNF280BQ86YH2 543 aa23.42■■□□□ 1.34
VSX1-201ENST00000376707 AUTS2Q8WXX7 1259 aa23.42■■□□□ 1.34
VSX1-201ENST00000376707 FAM193BQ96PV7 902 aaPredicted RBP23.42■■□□□ 1.34
VSX1-201ENST00000376707 KIF2CQ99661 725 aa23.42■■□□□ 1.34
VSX1-201ENST00000376707 KANSL3Q9P2N6 904 aa23.42■■□□□ 1.34
VSX1-201ENST00000376707 INO80B-WBP1J3KQ70 363 aa23.41■■□□□ 1.34
VSX1-201ENST00000376707 CTSAP10619 480 aa23.41■■□□□ 1.34
VSX1-201ENST00000376707 ATP2B1P20020 1258 aa23.41■■□□□ 1.34
VSX1-201ENST00000376707 PTENP60484 403 aa23.41■■□□□ 1.34
VSX1-201ENST00000376707 GIT2Q14161 759 aa23.41■■□□□ 1.34
VSX1-201ENST00000376707 CES5AQ6NT32 575 aa23.41■■□□□ 1.34
VSX1-201ENST00000376707 CNNM3Q8NE01 707 aa23.41■■□□□ 1.34
VSX1-201ENST00000376707 BCL7CQ8WUZ0 217 aaPredicted RBP23.41■■□□□ 1.34
VSX1-201ENST00000376707 MTMR9Q96QG7 549 aa23.41■■□□□ 1.34
VSX1-201ENST00000376707 TSPAN1O60635 241 aa23.4■■□□□ 1.34
VSX1-201ENST00000376707 ITGA4P13612 1032 aa23.4■■□□□ 1.34
VSX1-201ENST00000376707 NCLP19338 710 aaKnown RBP23.4■■□□□ 1.34
VSX1-201ENST00000376707 AXLP30530 894 aa23.4■■□□□ 1.34
VSX1-201ENST00000376707 MCM7P33993 719 aa23.4■■□□□ 1.34
VSX1-201ENST00000376707 GUCY1B3Q02153 619 aa23.4■■□□□ 1.34
VSX1-201ENST00000376707 NOTUMQ6P988 496 aa23.4■■□□□ 1.34
VSX1-201ENST00000376707 PIGOQ8TEQ8 1089 aa23.4■■□□□ 1.34
VSX1-201ENST00000376707 CCDC51Q96ER9 411 aa23.4■■□□□ 1.34
VSX1-201ENST00000376707 MFSD14AQ96MC6 490 aa23.4■■□□□ 1.34
VSX1-201ENST00000376707 LLPHQ9BRT6 129 aaKnown RBP23.4■■□□□ 1.34
VSX1-201ENST00000376707 UBN1Q9NPG3 1134 aa23.4■■□□□ 1.34
VSX1-201ENST00000376707 IRAK3Q9Y616 596 aa23.4■■□□□ 1.34
VSX1-201ENST00000376707 POTEMA6NI47 508 aa23.39■■□□□ 1.33
VSX1-201ENST00000376707 B4GALT3O60512 393 aa23.39■■□□□ 1.33
VSX1-201ENST00000376707 DDHD2O94830 711 aa23.39■■□□□ 1.33
VSX1-201ENST00000376707 POMCP01189 267 aa23.39■■□□□ 1.33
VSX1-201ENST00000376707 ALDH2P05091 517 aa23.39■■□□□ 1.33
VSX1-201ENST00000376707 RARRES1P49788 294 aa23.39■■□□□ 1.33
VSX1-201ENST00000376707 AFF1P51825 1210 aaKnown RBP23.39■■□□□ 1.33
VSX1-201ENST00000376707 ZXDAP98168 799 aa23.39■■□□□ 1.33
VSX1-201ENST00000376707 ITIH3Q06033 890 aa23.39■■□□□ 1.33
VSX1-201ENST00000376707 POU5F1BQ06416 359 aa23.39■■□□□ 1.33
VSX1-201ENST00000376707 CAPSQ13938 189 aa23.39■■□□□ 1.33
VSX1-201ENST00000376707 TRIM67Q6ZTA4 783 aa23.39■■□□□ 1.33
VSX1-201ENST00000376707 CCDC83Q8IWF9 413 aa23.39■■□□□ 1.33
VSX1-201ENST00000376707 ASAP3Q8TDY4 903 aa23.39■■□□□ 1.33
VSX1-201ENST00000376707 TMEM175Q9BSA9 504 aa23.39■■□□□ 1.33
VSX1-201ENST00000376707 ADAM7Q9H2U9 754 aa23.39■■□□□ 1.33
VSX1-201ENST00000376707 STK39Q9UEW8 545 aa23.39■■□□□ 1.33
VSX1-201ENST00000376707 IPPQ9Y573 584 aa23.39■■□□□ 1.33
VSX1-201ENST00000376707 SP100P23497 879 aaPredicted RBP23.38■■□□□ 1.33
VSX1-201ENST00000376707 ARL2P36404 184 aa23.38■■□□□ 1.33
VSX1-201ENST00000376707 IFNLR1Q8IU57 520 aaPredicted RBP23.38■■□□□ 1.33
VSX1-201ENST00000376707 SMG8Q8ND04 991 aaKnown RBP23.38■■□□□ 1.33
VSX1-201ENST00000376707 CPB2Q96IY4 423 aa23.38■■□□□ 1.33
VSX1-201ENST00000376707 C8orf76Q96K31 380 aa23.38■■□□□ 1.33
VSX1-201ENST00000376707 NECTIN4Q96NY8 510 aa23.38■■□□□ 1.33
VSX1-201ENST00000376707 EIF2AQ9BY44 585 aaKnown RBP23.38■■□□□ 1.33
VSX1-201ENST00000376707 TMEM60Q9H2L4 133 aa23.38■■□□□ 1.33
VSX1-201ENST00000376707 DZANK1Q9NVP4 752 aa23.38■■□□□ 1.33
VSX1-201ENST00000376707 FAN1Q9Y2M0 1017 aa23.38■■□□□ 1.33
VSX1-201ENST00000376707 ARID2Q68CP9 1835 aa23.38■■□□□ 1.33
VSX1-201ENST00000376707 A0A087WWV3 80 aa23.37■■□□□ 1.33
VSX1-201ENST00000376707 USO1O60763 962 aaKnown RBP23.37■■□□□ 1.33
VSX1-201ENST00000376707 XRCC6P12956 609 aaKnown RBP eCLIP23.37■■□□□ 1.33
VSX1-201ENST00000376707 MBTD1Q05BQ5 628 aa23.37■■□□□ 1.33
VSX1-201ENST00000376707 VN1R3Q9BXE9 311 aa23.37■■□□□ 1.33
VSX1-201ENST00000376707 TRIM6Q9C030 488 aaPredicted RBP23.37■■□□□ 1.33
VSX1-201ENST00000376707 CSRNP2Q9H175 543 aa23.37■■□□□ 1.33
VSX1-201ENST00000376707 POLR3FQ9H1D9 316 aaPredicted RBP23.37■■□□□ 1.33
VSX1-201ENST00000376707 TSHZ2Q9NRE2 1034 aa23.37■■□□□ 1.33
VSX1-201ENST00000376707 CDH22Q9UJ99 828 aa23.37■■□□□ 1.33
VSX1-201ENST00000376707 NR2E1Q9Y466 385 aa23.37■■□□□ 1.33
VSX1-201ENST00000376707 TMEM221A6NGB7 291 aa23.36■■□□□ 1.33
VSX1-201ENST00000376707 M0R296 226 aa23.36■■□□□ 1.33
VSX1-201ENST00000376707 NRP1O14786 923 aa23.36■■□□□ 1.33
VSX1-201ENST00000376707 EPCAMP16422 314 aa23.36■■□□□ 1.33
VSX1-201ENST00000376707 GLRA2P23416 452 aa23.36■■□□□ 1.33
VSX1-201ENST00000376707 PTPN14Q15678 1187 aa23.36■■□□□ 1.33
VSX1-201ENST00000376707 RARS2Q5T160 578 aaKnown RBP23.36■■□□□ 1.33
VSX1-201ENST00000376707 ZBTB33Q86T24 672 aa23.36■■□□□ 1.33
VSX1-201ENST00000376707 HACE1Q8IYU2 909 aa23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms