RNA–Protein interactions for RNA: ENST00000376545.7

ABCF1-202, Transcript of ATP binding cassette subfamily F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ABCF1, Length 3,131 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-202ENST00000376545 FMO2Q99518 471 aa11.53□□□□□ -0.56
ABCF1-202ENST00000376545 TRIM51Q9BSJ1 452 aa11.53□□□□□ -0.56
ABCF1-202ENST00000376545 VCPKMTQ9H867 229 aa11.53□□□□□ -0.56
ABCF1-202ENST00000376545 ZBTB21Q9ULJ3 1066 aa11.53□□□□□ -0.56
ABCF1-202ENST00000376545 SYNGAP1Q96PV0 1343 aa11.53□□□□□ -0.56
ABCF1-202ENST00000376545 YDJCA8MPS7 323 aa11.53□□□□□ -0.56
ABCF1-202ENST00000376545 KIAA0391O15091 583 aaKnown RBP11.53□□□□□ -0.56
ABCF1-202ENST00000376545 TBC1D12O60347 775 aa11.53□□□□□ -0.56
ABCF1-202ENST00000376545 GZMAP12544 262 aa11.53□□□□□ -0.56
ABCF1-202ENST00000376545 ITGB5P18084 799 aa11.53□□□□□ -0.56
ABCF1-202ENST00000376545 GTF2BQ00403 316 aa11.53□□□□□ -0.56
ABCF1-202ENST00000376545 CYP1B1Q16678 543 aa11.53□□□□□ -0.56
ABCF1-202ENST00000376545 PADI6Q6TGC4 694 aa11.53□□□□□ -0.56
ABCF1-202ENST00000376545 KRT27Q7Z3Y8 459 aa11.53□□□□□ -0.56
ABCF1-202ENST00000376545 FLAD1Q8NFF5 587 aa11.53□□□□□ -0.56
ABCF1-202ENST00000376545 SLC20A1Q8WUM9 679 aa11.53□□□□□ -0.56
ABCF1-202ENST00000376545 ZNF622Q969S3 477 aaKnown RBP eCLIP11.53□□□□□ -0.562e-8■■■■□ 24.2
ABCF1-202ENST00000376545 CYFIP2Q96F07 1278 aa11.53□□□□□ -0.56
ABCF1-202ENST00000376545 NOCTQ9UK39 431 aaKnown RBP11.53□□□□□ -0.56
ABCF1-202ENST00000376545 EMSYQ7Z589 1322 aa11.53□□□□□ -0.56
ABCF1-202ENST00000376545 ARHGEF35A5YM69 484 aa11.53□□□□□ -0.56
ABCF1-202ENST00000376545 PLSCR1O15162 318 aa11.53□□□□□ -0.56
ABCF1-202ENST00000376545 PHF2O75151 1096 aa11.53□□□□□ -0.56
ABCF1-202ENST00000376545 RTN2O75298 545 aa11.53□□□□□ -0.56
ABCF1-202ENST00000376545 GGPS1O95749 300 aa11.53□□□□□ -0.56
ABCF1-202ENST00000376545 CHRNB2P17787 502 aa11.53□□□□□ -0.56
ABCF1-202ENST00000376545 VAMP7P51809 220 aa11.53□□□□□ -0.56
ABCF1-202ENST00000376545 DRP2Q13474 957 aa11.53□□□□□ -0.56
ABCF1-202ENST00000376545 MEX3CQ5U5Q3 659 aaKnown RBP11.53□□□□□ -0.56
ABCF1-202ENST00000376545 CCDC174Q6PII3 467 aa11.53□□□□□ -0.56
ABCF1-202ENST00000376545 MMS22LQ6ZRQ5 1243 aa11.53□□□□□ -0.56
ABCF1-202ENST00000376545 ZDHHC14Q8IZN3 488 aa11.53□□□□□ -0.56
ABCF1-202ENST00000376545 PLEKHO2Q8TD55 490 aa11.53□□□□□ -0.56
ABCF1-202ENST00000376545 FAM151AQ8WW52 585 aa11.53□□□□□ -0.56
ABCF1-202ENST00000376545 GRHL1Q9NZI5 618 aa11.53□□□□□ -0.56
ABCF1-202ENST00000376545 WDR81Q562E7 1941 aa11.52□□□□□ -0.56
ABCF1-202ENST00000376545 GOLGA6L10A0A0M3HER8 536 aa11.52□□□□□ -0.56
ABCF1-202ENST00000376545 DCDC2CA8MYV0 355 aa11.52□□□□□ -0.56
ABCF1-202ENST00000376545 P4HBP07237 508 aaKnown RBP11.52□□□□□ -0.56
ABCF1-202ENST00000376545 HPDP32754 393 aaPredicted RBP11.52□□□□□ -0.56
ABCF1-202ENST00000376545 PTGER2P43116 358 aa11.52□□□□□ -0.56
ABCF1-202ENST00000376545 UBXN2AP68543 259 aa11.52□□□□□ -0.56
ABCF1-202ENST00000376545 GPC5P78333 572 aa11.52□□□□□ -0.56
ABCF1-202ENST00000376545 AOC3Q16853 763 aa11.52□□□□□ -0.56
ABCF1-202ENST00000376545 ARHGAP44Q17R89 818 aa11.52□□□□□ -0.56
ABCF1-202ENST00000376545 LDHDQ86WU2 507 aa11.52□□□□□ -0.56
ABCF1-202ENST00000376545 JAMLQ86YT9 394 aa11.52□□□□□ -0.56
ABCF1-202ENST00000376545 FAM71AQ8IYT1 594 aa11.52□□□□□ -0.56
ABCF1-202ENST00000376545 ZSWIM1Q9BR11 485 aa11.52□□□□□ -0.56
ABCF1-202ENST00000376545 DPH5Q9H2P9 285 aa11.52□□□□□ -0.56
ABCF1-202ENST00000376545 PABPC3Q9H361 631 aaKnown RBP11.52□□□□□ -0.56
ABCF1-202ENST00000376545 UBE2TQ9NPD8 197 aaPredicted RBP11.52□□□□□ -0.56
ABCF1-202ENST00000376545 FEM1BQ9UK73 627 aa11.52□□□□□ -0.56
ABCF1-202ENST00000376545 LOC102724159A0A0B4J2E5 919 aa11.52□□□□□ -0.57
ABCF1-202ENST00000376545 SPDYE2BA6NHP3 402 aa11.52□□□□□ -0.57
ABCF1-202ENST00000376545 E7EVH7 732 aa11.52□□□□□ -0.57
ABCF1-202ENST00000376545 FTLP02792 175 aaPredicted RBP11.52□□□□□ -0.57
ABCF1-202ENST00000376545 SPDYE6P0CI01 402 aa11.52□□□□□ -0.57
ABCF1-202ENST00000376545 KRT13P13646 458 aa11.52□□□□□ -0.57
ABCF1-202ENST00000376545 PLS3P13797 630 aa11.52□□□□□ -0.57
ABCF1-202ENST00000376545 CHRNA3P32297 505 aa11.52□□□□□ -0.57
ABCF1-202ENST00000376545 PLCB4Q15147 1175 aa11.52□□□□□ -0.57
ABCF1-202ENST00000376545 PWP2Q15269 919 aaKnown RBP11.52□□□□□ -0.57
ABCF1-202ENST00000376545 TNFAIP8L3Q5GJ75 292 aa11.52□□□□□ -0.57
ABCF1-202ENST00000376545 ICE2Q659A1 982 aa11.52□□□□□ -0.57
ABCF1-202ENST00000376545 PRELID2Q8N945 189 aa11.52□□□□□ -0.57
ABCF1-202ENST00000376545 PGM2Q96G03 612 aa11.52□□□□□ -0.57
ABCF1-202ENST00000376545 ACCSQ96QU6 501 aa11.52□□□□□ -0.57
ABCF1-202ENST00000376545 PCDHB18PQ96TA0 734 aa11.52□□□□□ -0.57
ABCF1-202ENST00000376545 TMEM109Q9BVC6 243 aa11.52□□□□□ -0.57
ABCF1-202ENST00000376545 CNOT10Q9H9A5 744 aaKnown RBP11.52□□□□□ -0.57
ABCF1-202ENST00000376545 LARSQ9P2J5 1176 aaKnown RBP11.52□□□□□ -0.57
ABCF1-202ENST00000376545 CNOT7Q9UIV1 285 aaKnown RBP11.52□□□□□ -0.57
ABCF1-202ENST00000376545 NOVA2Q9UNW9 492 aaKnown RBP11.52□□□□□ -0.57
ABCF1-202ENST00000376545 TULP1O00294 542 aaPredicted RBP11.51□□□□□ -0.57
ABCF1-202ENST00000376545 LRRN2O75325 713 aa11.51□□□□□ -0.57
ABCF1-202ENST00000376545 GBP1P32455 592 aa11.51□□□□□ -0.57
ABCF1-202ENST00000376545 RARRES1P49788 294 aa11.51□□□□□ -0.57
ABCF1-202ENST00000376545 MAP3K10Q02779 954 aa11.51□□□□□ -0.57
ABCF1-202ENST00000376545 BYSLQ13895 437 aaKnown RBP11.51□□□□□ -0.57
ABCF1-202ENST00000376545 ZNF568Q3ZCX4 644 aa11.51□□□□□ -0.57
ABCF1-202ENST00000376545 KCNV1Q6PIU1 500 aa11.51□□□□□ -0.57
ABCF1-202ENST00000376545 ARMC9Q7Z3E5 817 aa11.51□□□□□ -0.57
ABCF1-202ENST00000376545 OTUD6BQ8N6M0 293 aa11.51□□□□□ -0.57
ABCF1-202ENST00000376545 RAPGEF5Q92565 580 aa11.51□□□□□ -0.57
ABCF1-202ENST00000376545 PSMD1Q99460 953 aa11.51□□□□□ -0.57
ABCF1-202ENST00000376545 TIPINQ9BVW5 301 aa11.51□□□□□ -0.57
ABCF1-202ENST00000376545 KCNH7Q9NS40 1196 aa11.51□□□□□ -0.57
ABCF1-202ENST00000376545 DDX20Q9UHI6 824 aaKnown RBP11.51□□□□□ -0.57
ABCF1-202ENST00000376545 UBIAD1Q9Y5Z9 338 aa11.51□□□□□ -0.57
ABCF1-202ENST00000376545 ZHX2Q9Y6X8 837 aa11.51□□□□□ -0.57
ABCF1-202ENST00000376545 H0YIN7 160 aa11.51□□□□□ -0.57
ABCF1-202ENST00000376545 K7ENM7 598 aa11.51□□□□□ -0.57
ABCF1-202ENST00000376545 PODXLO00592 558 aa11.51□□□□□ -0.57
ABCF1-202ENST00000376545 NCKAP1LP55160 1127 aa11.51□□□□□ -0.57
ABCF1-202ENST00000376545 MAGOHP61326 146 aaKnown RBP11.51□□□□□ -0.57
ABCF1-202ENST00000376545 SIX1Q15475 284 aaPredicted RBP11.51□□□□□ -0.57
ABCF1-202ENST00000376545 SYCP3Q8IZU3 236 aa11.51□□□□□ -0.57
ABCF1-202ENST00000376545 EPS8L1Q8TE68 723 aa11.51□□□□□ -0.57
ABCF1-202ENST00000376545 KRT35Q92764 455 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms