RNA–Protein interactions for RNA: ENST00000376491.7

CLCN6-204, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 927 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-204ENST00000376491 DENND4AQ7Z401 1863 aa16.71■□□□□ 0.27
CLCN6-204ENST00000376491 C2orf16Q68DN1 1984 aa16.7■□□□□ 0.26
CLCN6-204ENST00000376491 PFKFB2O60825 505 aa16.7■□□□□ 0.26
CLCN6-204ENST00000376491 CDKL5O76039 1030 aa16.7■□□□□ 0.26
CLCN6-204ENST00000376491 AVPR2P30518 371 aa16.7■□□□□ 0.26
CLCN6-204ENST00000376491 YWHABP31946 246 aaKnown RBP16.7■□□□□ 0.26
CLCN6-204ENST00000376491 RFC5P40937 340 aa16.7■□□□□ 0.26
CLCN6-204ENST00000376491 MTHFRP42898 656 aa16.7■□□□□ 0.26
CLCN6-204ENST00000376491 PTPN5P54829 565 aa16.7■□□□□ 0.26
CLCN6-204ENST00000376491 LAMTOR4Q0VGL1 99 aa16.7■□□□□ 0.26
CLCN6-204ENST00000376491 GIT2Q14161 759 aa16.7■□□□□ 0.26
CLCN6-204ENST00000376491 CTTNQ14247 550 aaKnown RBP16.7■□□□□ 0.26
CLCN6-204ENST00000376491 PTPN14Q15678 1187 aa16.7■□□□□ 0.26
CLCN6-204ENST00000376491 ZBTB33Q86T24 672 aa16.7■□□□□ 0.26
CLCN6-204ENST00000376491 FERMT3Q86UX7 667 aa16.7■□□□□ 0.26
CLCN6-204ENST00000376491 PSPC1Q8WXF1 523 aaKnown RBP16.7■□□□□ 0.26
CLCN6-204ENST00000376491 PGBD4Q96DM1 585 aa16.7■□□□□ 0.26
CLCN6-204ENST00000376491 DYDC2Q96IM9 177 aa16.7■□□□□ 0.26
CLCN6-204ENST00000376491 SMOC2Q9H3U7 446 aa16.7■□□□□ 0.26
CLCN6-204ENST00000376491 PPME1Q9Y570 386 aa16.7■□□□□ 0.26
CLCN6-204ENST00000376491 CACNA1HO95180 2353 aa16.69■□□□□ 0.26
CLCN6-204ENST00000376491 CARNS1A5YM72 827 aa16.69■□□□□ 0.26
CLCN6-204ENST00000376491 BRD1O95696 1058 aa16.69■□□□□ 0.26
CLCN6-204ENST00000376491 CYP4A11Q02928 519 aa16.69■□□□□ 0.26
CLCN6-204ENST00000376491 EMC2Q15006 297 aa16.69■□□□□ 0.26
CLCN6-204ENST00000376491 XKR9Q5GH70 373 aa16.69■□□□□ 0.26
CLCN6-204ENST00000376491 NCAPH2Q6IBW4 605 aa16.69■□□□□ 0.26
CLCN6-204ENST00000376491 KIAA1841Q6NSI8 718 aa16.69■□□□□ 0.26
CLCN6-204ENST00000376491 RNF149Q8NC42 400 aa16.69■□□□□ 0.26
CLCN6-204ENST00000376491 RIPOR3Q96MK2 946 aa16.69■□□□□ 0.26
CLCN6-204ENST00000376491 PRRX2Q99811 253 aa16.69■□□□□ 0.26
CLCN6-204ENST00000376491 RSAD1Q9HA92 442 aa16.69■□□□□ 0.26
CLCN6-204ENST00000376491 XPNPEP1Q9NQW7 623 aa16.69■□□□□ 0.26
CLCN6-204ENST00000376491 DZANK1Q9NVP4 752 aa16.69■□□□□ 0.26
CLCN6-204ENST00000376491 TDRD15B5MCY1 1934 aaKnown RBP16.68■□□□□ 0.26
CLCN6-204ENST00000376491 LILRB3O75022 631 aa16.68■□□□□ 0.26
CLCN6-204ENST00000376491 ASGR2P07307 311 aa16.68■□□□□ 0.26
CLCN6-204ENST00000376491 FDPSP14324 419 aaKnown RBP16.68■□□□□ 0.26
CLCN6-204ENST00000376491 XBP1P17861 261 aa16.68■□□□□ 0.26
CLCN6-204ENST00000376491 NR5A1Q13285 461 aa16.68■□□□□ 0.26
CLCN6-204ENST00000376491 ATAT1Q5SQI0 421 aa16.68■□□□□ 0.26
CLCN6-204ENST00000376491 EXOC8Q8IYI6 725 aa16.68■□□□□ 0.26
CLCN6-204ENST00000376491 TMEM87AQ8NBN3 555 aa16.68■□□□□ 0.26
CLCN6-204ENST00000376491 SMG8Q8ND04 991 aaKnown RBP16.68■□□□□ 0.26
CLCN6-204ENST00000376491 URGCPQ8TCY9 931 aa16.68■□□□□ 0.26
CLCN6-204ENST00000376491 TNFRSF25Q93038 417 aa16.68■□□□□ 0.26
CLCN6-204ENST00000376491 KLHL5Q96PQ7 755 aa16.68■□□□□ 0.26
CLCN6-204ENST00000376491 TMEM175Q9BSA9 504 aa16.68■□□□□ 0.26
CLCN6-204ENST00000376491 ZSWIM4Q9H7M6 989 aa16.68■□□□□ 0.26
CLCN6-204ENST00000376491 ORC3Q9UBD5 711 aaPredicted RBP16.68■□□□□ 0.26
CLCN6-204ENST00000376491 SORCS3Q9UPU3 1222 aa16.68■□□□□ 0.26
CLCN6-204ENST00000376491 PLXNA3P51805 1871 aa16.67■□□□□ 0.26
CLCN6-204ENST00000376491 NRP1O14786 923 aa16.67■□□□□ 0.26
CLCN6-204ENST00000376491 ASAP2O43150 1006 aa16.67■□□□□ 0.26
CLCN6-204ENST00000376491 MARCH6O60337 910 aa16.67■□□□□ 0.26
CLCN6-204ENST00000376491 SLITRK3O94933 977 aa16.67■□□□□ 0.26
CLCN6-204ENST00000376491 POMCP01189 267 aa16.67■□□□□ 0.26
CLCN6-204ENST00000376491 ALDH2P05091 517 aa16.67■□□□□ 0.26
CLCN6-204ENST00000376491 SSBP05455 408 aaKnown RBP eCLIP16.67■□□□□ 0.26
CLCN6-204ENST00000376491 CNPP09543 421 aaKnown RBP16.67■□□□□ 0.26
CLCN6-204ENST00000376491 NCLP19338 710 aaKnown RBP16.67■□□□□ 0.26
CLCN6-204ENST00000376491 MTMR3Q13615 1198 aa16.67■□□□□ 0.26
CLCN6-204ENST00000376491 TMC5Q6UXY8 1006 aa16.67■□□□□ 0.26
CLCN6-204ENST00000376491 OTUD6AQ7L8S5 288 aa16.67■□□□□ 0.26
CLCN6-204ENST00000376491 ZDHHC14Q8IZN3 488 aa16.67■□□□□ 0.26
CLCN6-204ENST00000376491 TCP11Q8WWU5 503 aa16.67■□□□□ 0.26
CLCN6-204ENST00000376491 MTRQ99707 1265 aa16.67■□□□□ 0.26
CLCN6-204ENST00000376491 NAP1L4Q99733 375 aaKnown RBP16.67■□□□□ 0.26
CLCN6-204ENST00000376491 EIF2AQ9BY44 585 aaKnown RBP16.67■□□□□ 0.26
CLCN6-204ENST00000376491 RNF39Q9H2S5 420 aa16.67■□□□□ 0.26
CLCN6-204ENST00000376491 MARCH5Q9NX47 278 aa16.67■□□□□ 0.26
CLCN6-204ENST00000376491 KANSL3Q9P2N6 904 aa16.67■□□□□ 0.26
CLCN6-204ENST00000376491 LIMD1Q9UGP4 676 aa16.67■□□□□ 0.26
CLCN6-204ENST00000376491 DBR1Q9UK59 544 aaKnown RBP16.67■□□□□ 0.26
CLCN6-204ENST00000376491 FAN1Q9Y2M0 1017 aa16.67■□□□□ 0.26
CLCN6-204ENST00000376491 CNTNAP2Q9UHC6 1331 aa16.67■□□□□ 0.26
CLCN6-204ENST00000376491 WNT7AO00755 349 aa16.66■□□□□ 0.26
CLCN6-204ENST00000376491 GAS2O43903 313 aaKnown RBP16.66■□□□□ 0.26
CLCN6-204ENST00000376491 CLCN4P51793 760 aa16.66■□□□□ 0.26
CLCN6-204ENST00000376491 AK2P54819 239 aa16.66■□□□□ 0.26
CLCN6-204ENST00000376491 PTENP60484 403 aa16.66■□□□□ 0.26
CLCN6-204ENST00000376491 CABP7Q86V35 215 aa16.66■□□□□ 0.26
CLCN6-204ENST00000376491 PPFIBP1Q86W92 1011 aa16.66■□□□□ 0.26
CLCN6-204ENST00000376491 TPH2Q8IWU9 490 aa16.66■□□□□ 0.26
CLCN6-204ENST00000376491 COLGALT2Q8IYK4 626 aa16.66■□□□□ 0.26
CLCN6-204ENST00000376491 SLFN12Q8IYM2 578 aa16.66■□□□□ 0.26
CLCN6-204ENST00000376491 UBALD2Q8IYN6 164 aa16.66■□□□□ 0.26
CLCN6-204ENST00000376491 TDRD5Q8NAT2 981 aaKnown RBP16.66■□□□□ 0.26
CLCN6-204ENST00000376491 FAM193BQ96PV7 902 aaPredicted RBP16.66■□□□□ 0.26
CLCN6-204ENST00000376491 FAM86C1Q9NVL1 165 aa16.66■□□□□ 0.26
CLCN6-204ENST00000376491 MIOSQ9NXC5 875 aa16.66■□□□□ 0.26
CLCN6-204ENST00000376491 USTQ9Y2C2 406 aa16.66■□□□□ 0.26
CLCN6-204ENST00000376491 IPPQ9Y573 584 aa16.66■□□□□ 0.26
CLCN6-204ENST00000376491 INPPL1O15357 1258 aa16.65■□□□□ 0.26
CLCN6-204ENST00000376491 TSPAN1O60635 241 aa16.65■□□□□ 0.26
CLCN6-204ENST00000376491 BAG4O95429 457 aaKnown RBP16.65■□□□□ 0.26
CLCN6-204ENST00000376491 LARGE1O95461 756 aa16.65■□□□□ 0.26
CLCN6-204ENST00000376491 KLRC2P26717 231 aa16.65■□□□□ 0.26
CLCN6-204ENST00000376491 KRT2P35908 639 aa16.65■□□□□ 0.26
CLCN6-204ENST00000376491 TAS1R1Q7RTX1 841 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms