RNA–Protein interactions for RNA: ENST00000375755.7

MSH5-204, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-204ENST00000375755 MARCH6O60337 910 aa13.94□□□□□ -0.18
MSH5-204ENST00000375755 KRT16P08779 473 aa13.94□□□□□ -0.18
MSH5-204ENST00000375755 CCND1P24385 295 aa13.94□□□□□ -0.18
MSH5-204ENST00000375755 BLMHQ13867 455 aa13.94□□□□□ -0.18
MSH5-204ENST00000375755 ZNF571Q7Z3V5 609 aaPredicted RBP13.94□□□□□ -0.18
MSH5-204ENST00000375755 RASGEF1CQ8N431 466 aa13.94□□□□□ -0.18
MSH5-204ENST00000375755 MTMR14Q8NCE2 650 aa13.94□□□□□ -0.18
MSH5-204ENST00000375755 TPCN2Q8NHX9 752 aa13.94□□□□□ -0.18
MSH5-204ENST00000375755 CALML4Q96GE6 196 aa13.94□□□□□ -0.18
MSH5-204ENST00000375755 TSG101Q99816 390 aa13.94□□□□□ -0.18
MSH5-204ENST00000375755 ZNF541Q9H0D2 1346 aa13.94□□□□□ -0.18
MSH5-204ENST00000375755 TRAF5O00463 557 aa13.94□□□□□ -0.18
MSH5-204ENST00000375755 LINGO3P0C6S8 592 aa13.94□□□□□ -0.18
MSH5-204ENST00000375755 UBAP2Q5T6F2 1119 aaKnown RBP13.94□□□□□ -0.18
MSH5-204ENST00000375755 RNF25Q96BH1 459 aaPredicted RBP13.94□□□□□ -0.18
MSH5-204ENST00000375755 PGM2Q96G03 612 aa13.94□□□□□ -0.18
MSH5-204ENST00000375755 FAM167BQ9BTA0 163 aa13.94□□□□□ -0.18
MSH5-204ENST00000375755 HOMER3Q9NSC5 361 aa13.94□□□□□ -0.18
MSH5-204ENST00000375755 ATAD5Q96QE3 1844 aa13.94□□□□□ -0.18
MSH5-204ENST00000375755 EIF4E1BA6NMX2 242 aaKnown RBP13.94□□□□□ -0.18
MSH5-204ENST00000375755 ARHGAP4P98171 946 aa13.94□□□□□ -0.18
MSH5-204ENST00000375755 CACNB1Q02641 598 aaPredicted RBP13.94□□□□□ -0.18
MSH5-204ENST00000375755 ZNF341Q9BYN7 854 aa13.94□□□□□ -0.18
MSH5-204ENST00000375755 GANQ9H2C0 597 aa13.94□□□□□ -0.18
MSH5-204ENST00000375755 PCDHA12Q9UN75 941 aa13.94□□□□□ -0.18
MSH5-204ENST00000375755 NPHP3-ACAD11A0A0J9YXS1 232 aa13.93□□□□□ -0.18
MSH5-204ENST00000375755 AP1G2O75843 785 aa13.93□□□□□ -0.18
MSH5-204ENST00000375755 CFBP00751 764 aa13.93□□□□□ -0.18
MSH5-204ENST00000375755 NUDT17P0C025 328 aa13.93□□□□□ -0.18
MSH5-204ENST00000375755 GALNTL6Q49A17 601 aa13.93□□□□□ -0.18
MSH5-204ENST00000375755 ZCWPW2Q504Y3 356 aa13.93□□□□□ -0.18
MSH5-204ENST00000375755 THEMIS2Q5TEJ8 643 aa13.93□□□□□ -0.18
MSH5-204ENST00000375755 BTNL9Q6UXG8 535 aa13.93□□□□□ -0.18
MSH5-204ENST00000375755 PEX26Q7Z412 305 aa13.93□□□□□ -0.18
MSH5-204ENST00000375755 GOPCQ9HD26 462 aa13.93□□□□□ -0.18
MSH5-204ENST00000375755 CNOT7Q9UIV1 285 aaKnown RBP13.93□□□□□ -0.18
MSH5-204ENST00000375755 HACL1Q9UJ83 578 aa13.93□□□□□ -0.18
MSH5-204ENST00000375755 STXBP5LQ9Y2K9 1186 aa13.93□□□□□ -0.18
MSH5-204ENST00000375755 E9PMD0 336 aa13.93□□□□□ -0.18
MSH5-204ENST00000375755 SNX3O60493 162 aa13.93□□□□□ -0.18
MSH5-204ENST00000375755 UPP2O95045 317 aa13.93□□□□□ -0.18
MSH5-204ENST00000375755 ANKRD20A2Q5SQ80 823 aa13.93□□□□□ -0.18
MSH5-204ENST00000375755 NBPF12Q5TAG4 269 aaPredicted RBP13.93□□□□□ -0.18
MSH5-204ENST00000375755 ANKRD20A1Q5TYW2 823 aa13.93□□□□□ -0.18
MSH5-204ENST00000375755 ANKRD20A3Q5VUR7 823 aa13.93□□□□□ -0.18
MSH5-204ENST00000375755 FAM83AQ86UY5 434 aa13.93□□□□□ -0.18
MSH5-204ENST00000375755 CRYGNQ8WXF5 182 aa13.93□□□□□ -0.18
MSH5-204ENST00000375755 LARP4BQ92615 738 aaKnown RBP13.93□□□□□ -0.18
MSH5-204ENST00000375755 CCDC134Q9H6E4 229 aa13.93□□□□□ -0.18
MSH5-204ENST00000375755 ZDHHC18Q9NUE0 388 aa13.93□□□□□ -0.18
MSH5-204ENST00000375755 STK38LQ9Y2H1 464 aa13.93□□□□□ -0.18
MSH5-204ENST00000375755 POTEB3A0JP26 581 aa13.92□□□□□ -0.18
MSH5-204ENST00000375755 A6NHS1 94 aa13.92□□□□□ -0.18
MSH5-204ENST00000375755 POTECB2RU33 542 aa13.92□□□□□ -0.18
MSH5-204ENST00000375755 FKBP3Q00688 224 aaKnown RBP13.92□□□□□ -0.18
MSH5-204ENST00000375755 TMEM266Q2M3C6 531 aa13.92□□□□□ -0.18
MSH5-204ENST00000375755 SPDYCQ5MJ68 293 aa13.92□□□□□ -0.18
MSH5-204ENST00000375755 ARMC3Q5W041 872 aa13.92□□□□□ -0.18
MSH5-204ENST00000375755 POTEBQ6S5H4 581 aa13.92□□□□□ -0.18
MSH5-204ENST00000375755 IRF2BP2Q7Z5L9 587 aa13.92□□□□□ -0.18
MSH5-204ENST00000375755 DAAM2Q86T65 1068 aa13.92□□□□□ -0.18
MSH5-204ENST00000375755 LENG9Q96B70 501 aa13.92□□□□□ -0.18
MSH5-204ENST00000375755 PABPC3Q9H361 631 aaKnown RBP13.92□□□□□ -0.18
MSH5-204ENST00000375755 ADAM22Q9P0K1 906 aa13.92□□□□□ -0.18
MSH5-204ENST00000375755 SPDYE3A6NKU9 549 aa13.92□□□□□ -0.18
MSH5-204ENST00000375755 RGS16O15492 202 aaPredicted RBP13.92□□□□□ -0.18
MSH5-204ENST00000375755 OAS1P00973 400 aaKnown RBP13.92□□□□□ -0.18
MSH5-204ENST00000375755 ACTN1P12814 892 aa13.92□□□□□ -0.18
MSH5-204ENST00000375755 COPB2P35606 906 aa13.92□□□□□ -0.18
MSH5-204ENST00000375755 PMS2P54278 862 aa13.92□□□□□ -0.18
MSH5-204ENST00000375755 IFI16Q16666 785 aaKnown RBP13.92□□□□□ -0.18
MSH5-204ENST00000375755 NEK9Q8TD19 979 aa13.92□□□□□ -0.18
MSH5-204ENST00000375755 KLHL29Q96CT2 875 aa13.92□□□□□ -0.18
MSH5-204ENST00000375755 CDK5RAP3Q96JB5 506 aa13.92□□□□□ -0.18
MSH5-204ENST00000375755 AGBL1Q96MI9 1066 aa13.92□□□□□ -0.18
MSH5-204ENST00000375755 ETAA1Q9NY74 926 aa13.92□□□□□ -0.18
MSH5-204ENST00000375755 NAGPAQ9UK23 515 aa13.92□□□□□ -0.18
MSH5-204ENST00000375755 TRIM33Q9UPN9 1127 aa13.92□□□□□ -0.18
MSH5-204ENST00000375755 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.92□□□□□ -0.18
MSH5-204ENST00000375755 MEIS1O00470 390 aa13.92□□□□□ -0.18
MSH5-204ENST00000375755 LIN7AO14910 233 aaPredicted RBP13.92□□□□□ -0.18
MSH5-204ENST00000375755 EVI5O60447 810 aa13.92□□□□□ -0.18
MSH5-204ENST00000375755 MKRN4PQ13434 485 aaPredicted RBP13.92□□□□□ -0.18
MSH5-204ENST00000375755 DENND2CQ68D51 928 aa13.92□□□□□ -0.18
MSH5-204ENST00000375755 MAEAQ7L5Y9 396 aa13.92□□□□□ -0.18
MSH5-204ENST00000375755 SLFN11Q7Z7L1 901 aa13.92□□□□□ -0.18
MSH5-204ENST00000375755 TRIM59Q8IWR1 403 aa13.92□□□□□ -0.18
MSH5-204ENST00000375755 MYOCDQ8IZQ8 938 aa13.92□□□□□ -0.18
MSH5-204ENST00000375755 UHMK1Q8TAS1 419 aaKnown RBP13.92□□□□□ -0.18
MSH5-204ENST00000375755 KCNV2Q8TDN2 545 aa13.92□□□□□ -0.18
MSH5-204ENST00000375755 DDX12PQ92771 950 aa13.92□□□□□ -0.18
MSH5-204ENST00000375755 FGFBP2Q9BYJ0 223 aa13.92□□□□□ -0.18
MSH5-204ENST00000375755 VPS33BQ9H267 617 aa13.92□□□□□ -0.18
MSH5-204ENST00000375755 BCAS3Q9H6U6 928 aa13.92□□□□□ -0.18
MSH5-204ENST00000375755 PNMA3Q9UL41 463 aa13.92□□□□□ -0.18
MSH5-204ENST00000375755 CCDC169A6NNP5 214 aa13.91□□□□□ -0.18
MSH5-204ENST00000375755 MED24O75448 989 aa13.91□□□□□ -0.18
MSH5-204ENST00000375755 SNUPNO95149 360 aaKnown RBP13.91□□□□□ -0.18
MSH5-204ENST00000375755 FGGP02679 453 aa13.91□□□□□ -0.18
MSH5-204ENST00000375755 BNIP1Q12981 228 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms