RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 WRNIP1Q96S55 665 aa13.09□□□□□ -0.31
C9orf3-203ENST00000375315 PRMT1Q99873 361 aaKnown RBP13.09□□□□□ -0.31
C9orf3-203ENST00000375315 NEUROG2Q9H2A3 272 aa13.09□□□□□ -0.31
C9orf3-203ENST00000375315 SCOCQ9UIL1 159 aa13.09□□□□□ -0.31
C9orf3-203ENST00000375315 GGT7Q9UJ14 662 aa13.09□□□□□ -0.31
C9orf3-203ENST00000375315 BLOC1S6Q9UL45 172 aa13.09□□□□□ -0.31
C9orf3-203ENST00000375315 CES2O00748 559 aa13.08□□□□□ -0.31
C9orf3-203ENST00000375315 MAP3K13O43283 966 aa13.08□□□□□ -0.31
C9orf3-203ENST00000375315 TDP2O95551 362 aa13.08□□□□□ -0.31
C9orf3-203ENST00000375315 CFBP00751 764 aa13.08□□□□□ -0.31
C9orf3-203ENST00000375315 ADCY7P51828 1080 aa13.08□□□□□ -0.31
C9orf3-203ENST00000375315 HIRAP54198 1017 aaPredicted RBP13.08□□□□□ -0.31
C9orf3-203ENST00000375315 SPP2Q13103 211 aa13.08□□□□□ -0.31
C9orf3-203ENST00000375315 DYDC1Q8WWB3 177 aa13.08□□□□□ -0.31
C9orf3-203ENST00000375315 PSTPIP2Q9H939 334 aa13.08□□□□□ -0.31
C9orf3-203ENST00000375315 ZNF408Q9H9D4 720 aa13.08□□□□□ -0.31
C9orf3-203ENST00000375315 SSU72P8A0A1W2PR75 194 aa13.08□□□□□ -0.32
C9orf3-203ENST00000375315 CCDC169A6NNP5 214 aa13.08□□□□□ -0.32
C9orf3-203ENST00000375315 FZD9O00144 591 aa13.08□□□□□ -0.32
C9orf3-203ENST00000375315 CAP2P40123 477 aa13.08□□□□□ -0.32
C9orf3-203ENST00000375315 RFC5P40937 340 aa13.08□□□□□ -0.32
C9orf3-203ENST00000375315 PEX5P50542 639 aa13.08□□□□□ -0.32
C9orf3-203ENST00000375315 GFPT1Q06210 699 aaPredicted RBP13.08□□□□□ -0.32
C9orf3-203ENST00000375315 ASRGL1Q7L266 308 aa13.08□□□□□ -0.32
C9orf3-203ENST00000375315 RRAGAQ7L523 313 aa13.08□□□□□ -0.32
C9orf3-203ENST00000375315 SESTD1Q86VW0 696 aa13.08□□□□□ -0.32
C9orf3-203ENST00000375315 LZTS2Q9BRK4 669 aa13.08□□□□□ -0.32
C9orf3-203ENST00000375315 TANGO6Q9C0B7 1094 aa13.08□□□□□ -0.32
C9orf3-203ENST00000375315 ZWILCHQ9H900 591 aa13.08□□□□□ -0.32
C9orf3-203ENST00000375315 GOPCQ9HD26 462 aa13.08□□□□□ -0.32
C9orf3-203ENST00000375315 HERC5Q9UII4 1024 aaKnown RBP13.08□□□□□ -0.32
C9orf3-203ENST00000375315 LAMB1P07942 1786 aa13.08□□□□□ -0.32
C9orf3-203ENST00000375315 O00370 1275 aa13.08□□□□□ -0.32
C9orf3-203ENST00000375315 GNA11P29992 359 aa13.08□□□□□ -0.32
C9orf3-203ENST00000375315 FLT3P36888 993 aa13.08□□□□□ -0.32
C9orf3-203ENST00000375315 STAT6P42226 847 aa13.08□□□□□ -0.32
C9orf3-203ENST00000375315 ATP2C1P98194 919 aaPredicted RBP13.08□□□□□ -0.32
C9orf3-203ENST00000375315 TTLL12Q14166 644 aaPredicted RBP13.08□□□□□ -0.32
C9orf3-203ENST00000375315 TDRD12Q587J7 1177 aaKnown RBP13.08□□□□□ -0.32
C9orf3-203ENST00000375315 RNF220Q5VTB9 566 aa13.08□□□□□ -0.32
C9orf3-203ENST00000375315 IRGCQ6NXR0 463 aa13.08□□□□□ -0.32
C9orf3-203ENST00000375315 OPTNQ96CV9 577 aa13.08□□□□□ -0.32
C9orf3-203ENST00000375315 PGM2Q96G03 612 aa13.08□□□□□ -0.32
C9orf3-203ENST00000375315 MMADHCQ9H3L0 296 aaPredicted RBP13.08□□□□□ -0.32
C9orf3-203ENST00000375315 RIOX1Q9H6W3 641 aa13.08□□□□□ -0.32
C9orf3-203ENST00000375315 DMAP1Q9NPF5 467 aaPredicted RBP13.08□□□□□ -0.32
C9orf3-203ENST00000375315 FAM114A2Q9NRY5 505 aa13.08□□□□□ -0.32
C9orf3-203ENST00000375315 FAM207AQ9NSI2 230 aaPredicted RBP13.08□□□□□ -0.32
C9orf3-203ENST00000375315 NYAP2Q9P242 653 aa13.08□□□□□ -0.32
C9orf3-203ENST00000375315 NID2Q14112 1375 aa13.08□□□□□ -0.32
C9orf3-203ENST00000375315 MYH7BA7E2Y1 1941 aa13.07□□□□□ -0.32
C9orf3-203ENST00000375315 PNMA6FA0A0J9YX94 578 aa13.07□□□□□ -0.32
C9orf3-203ENST00000375315 ZBTB5O15062 677 aa13.07□□□□□ -0.32
C9orf3-203ENST00000375315 DAPK3O43293 454 aa13.07□□□□□ -0.32
C9orf3-203ENST00000375315 SKIV2L2P42285 1042 aaKnown RBP13.07□□□□□ -0.32
C9orf3-203ENST00000375315 TECP42680 631 aa13.07□□□□□ -0.32
C9orf3-203ENST00000375315 NONOQ15233 471 aaKnown RBP eCLIP13.07□□□□□ -0.32
C9orf3-203ENST00000375315 RPS6KA1Q15418 735 aa13.07□□□□□ -0.32
C9orf3-203ENST00000375315 ENOX2Q16206 610 aaKnown RBP13.07□□□□□ -0.32
C9orf3-203ENST00000375315 GPATCH4Q5T3I0 446 aaKnown RBP13.07□□□□□ -0.32
C9orf3-203ENST00000375315 MOB2Q70IA6 237 aa13.07□□□□□ -0.32
C9orf3-203ENST00000375315 CROCCP2Q86T23 111 aa13.07□□□□□ -0.32
C9orf3-203ENST00000375315 STK32AQ8WU08 396 aa13.07□□□□□ -0.32
C9orf3-203ENST00000375315 DNAJC9Q8WXX5 260 aa13.07□□□□□ -0.32
C9orf3-203ENST00000375315 TNFRSF25Q93038 417 aa13.07□□□□□ -0.32
C9orf3-203ENST00000375315 UBE2OQ9C0C9 1292 aaKnown RBP13.07□□□□□ -0.32
C9orf3-203ENST00000375315 MMRN2Q9H8L6 949 aa13.07□□□□□ -0.32
C9orf3-203ENST00000375315 DNAAF2Q9NVR5 837 aaKnown RBP13.07□□□□□ -0.32
C9orf3-203ENST00000375315 CTTNBP2NLQ9P2B4 639 aa13.07□□□□□ -0.32
C9orf3-203ENST00000375315 LRRC53A6NM62 1247 aa13.07□□□□□ -0.32
C9orf3-203ENST00000375315 ADM5C9JUS6 153 aa13.07□□□□□ -0.32
C9orf3-203ENST00000375315 KCNK3O14649 394 aa13.07□□□□□ -0.32
C9orf3-203ENST00000375315 RGS16O15492 202 aaPredicted RBP13.07□□□□□ -0.32
C9orf3-203ENST00000375315 PEX10O60683 326 aa13.07□□□□□ -0.32
C9orf3-203ENST00000375315 PSMC4P43686 418 aa13.07□□□□□ -0.32
C9orf3-203ENST00000375315 IFNAR2P48551 515 aa13.07□□□□□ -0.32
C9orf3-203ENST00000375315 NAB2Q15742 525 aa13.07□□□□□ -0.32
C9orf3-203ENST00000375315 MYLK4Q86YV6 388 aaPredicted RBP13.07□□□□□ -0.32
C9orf3-203ENST00000375315 SCFD2Q8WU76 684 aa13.07□□□□□ -0.32
C9orf3-203ENST00000375315 DUSP9Q99956 384 aaKnown RBP13.07□□□□□ -0.32
C9orf3-203ENST00000375315 VCX3BQ9H321 246 aa13.07□□□□□ -0.32
C9orf3-203ENST00000375315 RXFP1Q9HBX9 757 aa13.07□□□□□ -0.32
C9orf3-203ENST00000375315 VCX3AQ9NNX9 186 aa13.07□□□□□ -0.32
C9orf3-203ENST00000375315 CCDC188H7C350 402 aa13.06□□□□□ -0.32
C9orf3-203ENST00000375315 SHBGP04278 402 aa13.06□□□□□ -0.32
C9orf3-203ENST00000375315 PLS1Q14651 629 aa13.06□□□□□ -0.32
C9orf3-203ENST00000375315 IL17AQ16552 155 aa13.06□□□□□ -0.32
C9orf3-203ENST00000375315 MIIPQ5JXC2 388 aa13.06□□□□□ -0.32
C9orf3-203ENST00000375315 SYDE2Q5VT97 1194 aa13.06□□□□□ -0.32
C9orf3-203ENST00000375315 STMN4Q9H169 189 aaPredicted RBP13.06□□□□□ -0.32
C9orf3-203ENST00000375315 PKD2L1Q9P0L9 805 aa13.06□□□□□ -0.32
C9orf3-203ENST00000375315 PRR12Q9ULL5 1215 aa13.06□□□□□ -0.32
C9orf3-203ENST00000375315 PACSIN2Q9UNF0 486 aaPredicted RBP13.06□□□□□ -0.32
C9orf3-203ENST00000375315 PHF24Q9UPV7 400 aa13.06□□□□□ -0.32
C9orf3-203ENST00000375315 ATP8A1Q9Y2Q0 1164 aa13.06□□□□□ -0.32
C9orf3-203ENST00000375315 ARL2BPQ9Y2Y0 163 aa13.06□□□□□ -0.32
C9orf3-203ENST00000375315 TLDC2A0PJX2 215 aa13.06□□□□□ -0.32
C9orf3-203ENST00000375315 BHMG1C9JSJ3 638 aaPredicted RBP13.06□□□□□ -0.32
C9orf3-203ENST00000375315 CEP104O60308 925 aa13.06□□□□□ -0.32
C9orf3-203ENST00000375315 OAS1P00973 400 aaKnown RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms