RNA–Protein interactions for RNA: ENST00000374676.4

HSPG2-202, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 411 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-202ENST00000374676 DACT1Q9NYF0 836 aa12.52□□□□□ -0.41
HSPG2-202ENST00000374676 DENND3A2RUS2 1198 aa12.51□□□□□ -0.41
HSPG2-202ENST00000374676 KLRC4O43908 158 aa12.51□□□□□ -0.41
HSPG2-202ENST00000374676 MGEA5O60502 916 aa12.51□□□□□ -0.41
HSPG2-202ENST00000374676 TSPAN1O60635 241 aa12.51□□□□□ -0.41
HSPG2-202ENST00000374676 KINO60870 393 aaKnown RBP12.51□□□□□ -0.41
HSPG2-202ENST00000374676 ERLIN2O94905 339 aa12.51□□□□□ -0.41
HSPG2-202ENST00000374676 PRKCBP05771 671 aa12.51□□□□□ -0.41
HSPG2-202ENST00000374676 CASP1P29466 404 aa12.51□□□□□ -0.41
HSPG2-202ENST00000374676 HOXA11P31270 313 aaPredicted RBP12.51□□□□□ -0.41
HSPG2-202ENST00000374676 FAM189BP81408 668 aa12.51□□□□□ -0.41
HSPG2-202ENST00000374676 GTF2BQ00403 316 aa12.51□□□□□ -0.41
HSPG2-202ENST00000374676 DPYDQ12882 1025 aa12.51□□□□□ -0.41
HSPG2-202ENST00000374676 COASYQ13057 564 aa12.51□□□□□ -0.41
HSPG2-202ENST00000374676 TAS1R3Q7RTX0 852 aa12.51□□□□□ -0.41
HSPG2-202ENST00000374676 SFR1Q86XK3 245 aa12.51□□□□□ -0.41
HSPG2-202ENST00000374676 TDHQ8IZJ6 230 aa12.51□□□□□ -0.41
HSPG2-202ENST00000374676 PHOSPHO2Q8TCD6 241 aa12.51□□□□□ -0.41
HSPG2-202ENST00000374676 LINC01599Q8WXQ3 324 aa12.51□□□□□ -0.41
HSPG2-202ENST00000374676 CCDC51Q96ER9 411 aa12.51□□□□□ -0.41
HSPG2-202ENST00000374676 ADAM2Q99965 735 aa12.51□□□□□ -0.41
HSPG2-202ENST00000374676 TRAIPQ9BWF2 469 aa12.51□□□□□ -0.41
HSPG2-202ENST00000374676 STRA6Q9BX79 667 aa12.51□□□□□ -0.41
HSPG2-202ENST00000374676 C1orf112Q9NSG2 853 aa12.51□□□□□ -0.41
HSPG2-202ENST00000374676 CXXC1Q9P0U4 656 aaPredicted RBP12.51□□□□□ -0.41
HSPG2-202ENST00000374676 HOOK1Q9UJC3 728 aaKnown RBP12.51□□□□□ -0.41
HSPG2-202ENST00000374676 A0A1B0GUA9 196 aa12.5□□□□□ -0.41
HSPG2-202ENST00000374676 ZBBXA8MT70 800 aa12.5□□□□□ -0.41
HSPG2-202ENST00000374676 C9IYK1 514 aa12.5□□□□□ -0.41
HSPG2-202ENST00000374676 PPP1R37O75864 691 aa12.5□□□□□ -0.41
HSPG2-202ENST00000374676 ARF4P18085 180 aaPredicted RBP12.5□□□□□ -0.41
HSPG2-202ENST00000374676 NMT1P30419 496 aaKnown RBP12.5□□□□□ -0.41
HSPG2-202ENST00000374676 KCNJ6P48051 423 aa12.5□□□□□ -0.41
HSPG2-202ENST00000374676 WDR5P61964 334 aaKnown RBP12.5□□□□□ -0.41
HSPG2-202ENST00000374676 PSMD2Q13200 908 aa12.5□□□□□ -0.41
HSPG2-202ENST00000374676 PRPF4BQ13523 1007 aaKnown RBP12.5□□□□□ -0.41
HSPG2-202ENST00000374676 ALCAMQ13740 583 aa12.5□□□□□ -0.41
HSPG2-202ENST00000374676 POSTNQ15063 836 aa12.5□□□□□ -0.41
HSPG2-202ENST00000374676 NT5DC1Q5TFE4 455 aa12.5□□□□□ -0.41
HSPG2-202ENST00000374676 NOTUMQ6P988 496 aa12.5□□□□□ -0.41
HSPG2-202ENST00000374676 SLC24A5Q71RS6 500 aa12.5□□□□□ -0.41
HSPG2-202ENST00000374676 HVCN1Q96D96 273 aa12.5□□□□□ -0.41
HSPG2-202ENST00000374676 RNPC3Q96LT9 517 aaKnown RBP12.5□□□□□ -0.41
HSPG2-202ENST00000374676 SLC9A7Q96T83 725 aa12.5□□□□□ -0.41
HSPG2-202ENST00000374676 MRPL44Q9H9J2 332 aaKnown RBP12.5□□□□□ -0.41
HSPG2-202ENST00000374676 RNF216Q9NWF9 866 aaPredicted RBP12.5□□□□□ -0.41
HSPG2-202ENST00000374676 TBX20Q9UMR3 447 aa12.5□□□□□ -0.41
HSPG2-202ENST00000374676 PIN4Q9Y237 131 aaKnown RBP12.5□□□□□ -0.41
HSPG2-202ENST00000374676 PCDHB13Q9Y5F0 798 aa12.5□□□□□ -0.41
HSPG2-202ENST00000374676 SLC4A7Q9Y6M7 1214 aa12.5□□□□□ -0.41
HSPG2-202ENST00000374676 CNTNAP2Q9UHC6 1331 aa12.5□□□□□ -0.41
HSPG2-202ENST00000374676 PTPRSQ13332 1948 aa12.5□□□□□ -0.41
HSPG2-202ENST00000374676 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.49□□□□□ -0.41
HSPG2-202ENST00000374676 A0A0U1RQF3 1178 aa12.49□□□□□ -0.41
HSPG2-202ENST00000374676 RBAK-RBAKDNI3L0D1 243 aa12.49□□□□□ -0.41
HSPG2-202ENST00000374676 K7ENM7 598 aa12.49□□□□□ -0.41
HSPG2-202ENST00000374676 ZNF623O75123 536 aa12.49□□□□□ -0.41
HSPG2-202ENST00000374676 AMHP03971 560 aa12.49□□□□□ -0.41
HSPG2-202ENST00000374676 RPN1P04843 607 aaKnown RBP12.49□□□□□ -0.41
HSPG2-202ENST00000374676 EDN1P05305 212 aa12.49□□□□□ -0.41
HSPG2-202ENST00000374676 PRR29P0C7W0 189 aa12.49□□□□□ -0.41
HSPG2-202ENST00000374676 SKIP12755 728 aa12.49□□□□□ -0.41
HSPG2-202ENST00000374676 MCM4P33991 863 aa12.49□□□□□ -0.41
HSPG2-202ENST00000374676 SARSP49591 514 aaKnown RBP12.49□□□□□ -0.41
HSPG2-202ENST00000374676 STRN3Q13033 797 aa12.49□□□□□ -0.41
HSPG2-202ENST00000374676 KCNB1Q14721 858 aa12.49□□□□□ -0.41
HSPG2-202ENST00000374676 FAM26FQ5R3K3 315 aa12.49□□□□□ -0.41
HSPG2-202ENST00000374676 ZPBP2Q6X784 338 aa12.49□□□□□ -0.41
HSPG2-202ENST00000374676 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.49□□□□□ -0.41
HSPG2-202ENST00000374676 CRIPAKQ8N1N5 446 aa12.49□□□□□ -0.41
HSPG2-202ENST00000374676 SPATA20Q8TB22 786 aa12.49□□□□□ -0.41
HSPG2-202ENST00000374676 TOP1MTQ969P6 601 aa12.49□□□□□ -0.41
HSPG2-202ENST00000374676 CCDC47Q96A33 483 aaKnown RBP12.49□□□□□ -0.41
HSPG2-202ENST00000374676 ACO2Q99798 780 aaKnown RBP12.49□□□□□ -0.41
HSPG2-202ENST00000374676 MRPL4Q9BYD3 311 aaKnown RBP12.49□□□□□ -0.41
HSPG2-202ENST00000374676 ELAC1Q9H777 363 aaKnown RBP12.49□□□□□ -0.41
HSPG2-202ENST00000374676 TBC1D7Q9P0N9 293 aa12.49□□□□□ -0.41
HSPG2-202ENST00000374676 COLQQ9Y215 455 aaPredicted RBP12.49□□□□□ -0.41
HSPG2-202ENST00000374676 TNFSF13BQ9Y275 285 aa12.49□□□□□ -0.41
HSPG2-202ENST00000374676 TTLL13PA6NNM8 815 aa12.48□□□□□ -0.41
HSPG2-202ENST00000374676 N4BP3O15049 544 aa12.48□□□□□ -0.41
HSPG2-202ENST00000374676 B4GALT5O43286 388 aa12.48□□□□□ -0.41
HSPG2-202ENST00000374676 RHOBTB3O94955 611 aa12.48□□□□□ -0.41
HSPG2-202ENST00000374676 SMC2O95347 1197 aa12.48□□□□□ -0.41
HSPG2-202ENST00000374676 EOMESO95936 686 aa12.48□□□□□ -0.41
HSPG2-202ENST00000374676 PIGRP01833 764 aa12.48□□□□□ -0.41
HSPG2-202ENST00000374676 RAB27AP51159 221 aa12.48□□□□□ -0.41
HSPG2-202ENST00000374676 DEFB103AP81534 67 aa12.48□□□□□ -0.41
HSPG2-202ENST00000374676 PNOCQ13519 176 aa12.48□□□□□ -0.41
HSPG2-202ENST00000374676 KMT5BQ4FZB7 885 aa12.48□□□□□ -0.41
HSPG2-202ENST00000374676 ZC2HC1CQ53FD0 456 aaPredicted RBP12.48□□□□□ -0.41
HSPG2-202ENST00000374676 UBXN11Q5T124 520 aa12.48□□□□□ -0.41
HSPG2-202ENST00000374676 ATF7IP2Q5U623 682 aa12.48□□□□□ -0.41
HSPG2-202ENST00000374676 TWF2Q6IBS0 349 aaKnown RBP12.48□□□□□ -0.41
HSPG2-202ENST00000374676 SLC27A1Q6PCB7 646 aa12.48□□□□□ -0.41
HSPG2-202ENST00000374676 STXBP4Q6ZWJ1 553 aa12.48□□□□□ -0.41
HSPG2-202ENST00000374676 EPM2AIP1Q7L775 607 aaPredicted RBP12.48□□□□□ -0.41
HSPG2-202ENST00000374676 MRPL10Q7Z7H8 261 aaKnown RBP12.48□□□□□ -0.41
HSPG2-202ENST00000374676 MAP4K3Q8IVH8 894 aa12.48□□□□□ -0.41
HSPG2-202ENST00000374676 ZNF507Q8TCN5 953 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms