RNA–Protein interactions for RNA: ENST00000374399.8

NIPAL3-204, Transcript of NIPA like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPAL3, Length 1,711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-204ENST00000374399 CD99L2Q8TCZ2 262 aa17.15■□□□□ 0.34
NIPAL3-204ENST00000374399 PPP1R13LQ8WUF5 828 aa17.15■□□□□ 0.34
NIPAL3-204ENST00000374399 DNAJC7Q99615 494 aa17.15■□□□□ 0.34
NIPAL3-204ENST00000374399 BAG1Q99933 345 aaPredicted RBP17.15■□□□□ 0.34
NIPAL3-204ENST00000374399 CRACR2AQ9BSW2 395 aa17.15■□□□□ 0.34
NIPAL3-204ENST00000374399 NUP58Q9BVL2 599 aa17.15■□□□□ 0.34
NIPAL3-204ENST00000374399 FRMD4BQ9Y2L6 1034 aa17.15■□□□□ 0.34
NIPAL3-204ENST00000374399 TRIP12Q14669 1992 aaPredicted RBP17.14■□□□□ 0.34
NIPAL3-204ENST00000374399 A0A1W2PQJ5 194 aa17.14■□□□□ 0.33
NIPAL3-204ENST00000374399 K7ERI5 159 aa17.14■□□□□ 0.33
NIPAL3-204ENST00000374399 HNRNPDLO14979 420 aaKnown RBP17.14■□□□□ 0.33
NIPAL3-204ENST00000374399 MAGEB2O15479 319 aa17.14■□□□□ 0.33
NIPAL3-204ENST00000374399 DUSP11O75319 330 aaKnown RBP17.14■□□□□ 0.33
NIPAL3-204ENST00000374399 TRIM49P0CI25 452 aa17.14■□□□□ 0.33
NIPAL3-204ENST00000374399 TRIM49CP0CI26 452 aa17.14■□□□□ 0.33
NIPAL3-204ENST00000374399 ABCD1P33897 745 aa17.14■□□□□ 0.33
NIPAL3-204ENST00000374399 KRT9P35527 623 aa17.14■□□□□ 0.33
NIPAL3-204ENST00000374399 CACNB2Q08289 660 aaPredicted RBP17.14■□□□□ 0.33
NIPAL3-204ENST00000374399 BFSP1Q12934 665 aa17.14■□□□□ 0.33
NIPAL3-204ENST00000374399 PPFIA1Q13136 1202 aa17.14■□□□□ 0.33
NIPAL3-204ENST00000374399 E4F1Q66K89 784 aaPredicted RBP17.14■□□□□ 0.33
NIPAL3-204ENST00000374399 RHPN2Q8IUC4 686 aa17.14■□□□□ 0.33
NIPAL3-204ENST00000374399 METTL13Q8N6R0 699 aa17.14■□□□□ 0.33
NIPAL3-204ENST00000374399 CCDC112Q8NEF3 446 aa17.14■□□□□ 0.33
NIPAL3-204ENST00000374399 SAAL1Q96ER3 474 aa17.14■□□□□ 0.33
NIPAL3-204ENST00000374399 CCDC51Q96ER9 411 aa17.14■□□□□ 0.33
NIPAL3-204ENST00000374399 ZNF668Q96K58 619 aaPredicted RBP17.14■□□□□ 0.33
NIPAL3-204ENST00000374399 ZBTB45Q96K62 511 aaPredicted RBP17.14■□□□□ 0.33
NIPAL3-204ENST00000374399 TARS2Q9BW92 718 aaKnown RBP17.14■□□□□ 0.33
NIPAL3-204ENST00000374399 FAM207AQ9NSI2 230 aaPredicted RBP17.14■□□□□ 0.33
NIPAL3-204ENST00000374399 SPTLC3Q9NUV7 552 aa17.14■□□□□ 0.33
NIPAL3-204ENST00000374399 USP27XA6NNY8 438 aa17.13■□□□□ 0.33
NIPAL3-204ENST00000374399 STX10O60499 249 aa17.13■□□□□ 0.33
NIPAL3-204ENST00000374399 IQCF3P0C7M6 154 aa17.13■□□□□ 0.33
NIPAL3-204ENST00000374399 TRIM21P19474 475 aaKnown RBP17.13■□□□□ 0.33
NIPAL3-204ENST00000374399 GARTP22102 1010 aa17.13■□□□□ 0.33
NIPAL3-204ENST00000374399 KIAA0753Q2KHM9 967 aa17.13■□□□□ 0.33
NIPAL3-204ENST00000374399 CBWD6Q4V339 395 aa17.13■□□□□ 0.33
NIPAL3-204ENST00000374399 CBWD3Q5JTY5 395 aa17.13■□□□□ 0.33
NIPAL3-204ENST00000374399 CBWD5Q5RIA9 395 aa17.13■□□□□ 0.33
NIPAL3-204ENST00000374399 MFSD14CQ5VZR4 134 aa17.13■□□□□ 0.33
NIPAL3-204ENST00000374399 WDR59Q6PJI9 974 aa17.13■□□□□ 0.33
NIPAL3-204ENST00000374399 BAP1Q92560 729 aa17.13■□□□□ 0.33
NIPAL3-204ENST00000374399 MMRN2Q9H8L6 949 aa17.13■□□□□ 0.33
NIPAL3-204ENST00000374399 MINDY3Q9H8M7 445 aa17.13■□□□□ 0.33
NIPAL3-204ENST00000374399 IFT122Q9HBG6 1241 aa17.13■□□□□ 0.33
NIPAL3-204ENST00000374399 SETD4Q9NVD3 440 aa17.13■□□□□ 0.33
NIPAL3-204ENST00000374399 SRRDQ9UH36 339 aa17.13■□□□□ 0.33
NIPAL3-204ENST00000374399 GPR25O00155 361 aa17.13■□□□□ 0.33
NIPAL3-204ENST00000374399 SMIM10L2AP0DMW4 78 aa17.13■□□□□ 0.33
NIPAL3-204ENST00000374399 SMIM10L2BP0DMW5 78 aa17.13■□□□□ 0.33
NIPAL3-204ENST00000374399 ELNP15502 786 aa17.13■□□□□ 0.33
NIPAL3-204ENST00000374399 SLC9A1P19634 815 aa17.13■□□□□ 0.33
NIPAL3-204ENST00000374399 KCNJ6P48051 423 aa17.13■□□□□ 0.33
NIPAL3-204ENST00000374399 FMO5P49326 533 aa17.13■□□□□ 0.33
NIPAL3-204ENST00000374399 CPT1AP50416 773 aa17.13■□□□□ 0.33
NIPAL3-204ENST00000374399 GJA9P57773 515 aa17.13■□□□□ 0.33
NIPAL3-204ENST00000374399 PTENP60484 403 aa17.13■□□□□ 0.33
NIPAL3-204ENST00000374399 NKX3-2P78367 333 aa17.13■□□□□ 0.33
NIPAL3-204ENST00000374399 ADAM17P78536 824 aa17.13■□□□□ 0.33
NIPAL3-204ENST00000374399 STRN3Q13033 797 aa17.13■□□□□ 0.33
NIPAL3-204ENST00000374399 NOLC1Q14978 699 aaKnown RBP eCLIP17.13■□□□□ 0.33
NIPAL3-204ENST00000374399 SNRNP35Q16560 246 aaKnown RBP17.13■□□□□ 0.33
NIPAL3-204ENST00000374399 FSCN1Q16658 493 aaKnown RBP17.13■□□□□ 0.33
NIPAL3-204ENST00000374399 KIAA0319LQ8IZA0 1049 aa17.13■□□□□ 0.33
NIPAL3-204ENST00000374399 LMBR1Q8WVP7 490 aa17.13■□□□□ 0.33
NIPAL3-204ENST00000374399 GANQ9H2C0 597 aa17.13■□□□□ 0.33
NIPAL3-204ENST00000374399 SIX2Q9NPC8 291 aa17.13■□□□□ 0.33
NIPAL3-204ENST00000374399 KCND1Q9NSA2 647 aa17.13■□□□□ 0.33
NIPAL3-204ENST00000374399 LUC7L2Q9Y383 392 aaKnown RBP17.13■□□□□ 0.33
NIPAL3-204ENST00000374399 DNAH12Q6ZR08 3092 aa17.13■□□□□ 0.33
NIPAL3-204ENST00000374399 SCN10AQ9Y5Y9 1956 aa17.12■□□□□ 0.33
NIPAL3-204ENST00000374399 ABLIM1O14639 778 aa17.12■□□□□ 0.33
NIPAL3-204ENST00000374399 PON1P27169 355 aa17.12■□□□□ 0.33
NIPAL3-204ENST00000374399 LIG4P49917 911 aa17.12■□□□□ 0.33
NIPAL3-204ENST00000374399 EFNA5P52803 228 aa17.12■□□□□ 0.33
NIPAL3-204ENST00000374399 ZBED6P86452 979 aa17.12■□□□□ 0.33
NIPAL3-204ENST00000374399 PURAQ00577 322 aaKnown RBP17.12■□□□□ 0.33
NIPAL3-204ENST00000374399 MBTD1Q05BQ5 628 aa17.12■□□□□ 0.33
NIPAL3-204ENST00000374399 PPP3CAQ08209 521 aa17.12■□□□□ 0.33
NIPAL3-204ENST00000374399 MFSD10Q14728 455 aa17.12■□□□□ 0.33
NIPAL3-204ENST00000374399 MTF1Q14872 753 aa17.12■□□□□ 0.33
NIPAL3-204ENST00000374399 TCERG1LQ5VWI1 586 aa17.12■□□□□ 0.33
NIPAL3-204ENST00000374399 CRELD2Q6UXH1 353 aaPredicted RBP17.12■□□□□ 0.33
NIPAL3-204ENST00000374399 RAD9BQ6WBX8 426 aa17.12■□□□□ 0.33
NIPAL3-204ENST00000374399 INTS8Q75QN2 995 aaKnown RBP17.12■□□□□ 0.33
NIPAL3-204ENST00000374399 POMGNT1Q8WZA1 660 aa17.12■□□□□ 0.33
NIPAL3-204ENST00000374399 MFSD14AQ96MC6 490 aa17.12■□□□□ 0.33
NIPAL3-204ENST00000374399 PCMTD1Q96MG8 357 aaPredicted RBP17.12■□□□□ 0.33
NIPAL3-204ENST00000374399 LSM14BQ9BX40 385 aaKnown RBP17.12■□□□□ 0.33
NIPAL3-204ENST00000374399 NFKBIZQ9BYH8 718 aa17.12■□□□□ 0.33
NIPAL3-204ENST00000374399 AP5M1Q9H0R1 490 aa17.12■□□□□ 0.33
NIPAL3-204ENST00000374399 UPF3AQ9H1J1 476 aaKnown RBP17.12■□□□□ 0.33
NIPAL3-204ENST00000374399 FZD8Q9H461 694 aa17.12■□□□□ 0.33
NIPAL3-204ENST00000374399 GTPBP10A4D1E9 387 aaKnown RBP17.11■□□□□ 0.33
NIPAL3-204ENST00000374399 MBLAC1A4D2B0 266 aaPredicted RBP17.11■□□□□ 0.33
NIPAL3-204ENST00000374399 SOWAHDA6NJG2 315 aa17.11■□□□□ 0.33
NIPAL3-204ENST00000374399 ASAP2O43150 1006 aa17.11■□□□□ 0.33
NIPAL3-204ENST00000374399 SEPT4O43236 478 aa17.11■□□□□ 0.33
NIPAL3-204ENST00000374399 VTNP04004 478 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms