RNA–Protein interactions for RNA: ENST00000373711.3

CDKN1A-202, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDKN1A, Length 793 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-202ENST00000373711 TEKT3Q9BXF9 490 aa16.67■□□□□ 0.26
CDKN1A-202ENST00000373711 RSAD1Q9HA92 442 aa16.67■□□□□ 0.26
CDKN1A-202ENST00000373711 PIDD1Q9HB75 910 aa16.67■□□□□ 0.26
CDKN1A-202ENST00000373711 TPRP12270 2363 aaKnown RBP16.67■□□□□ 0.26
CDKN1A-202ENST00000373711 PATJQ8NI35 1801 aa16.66■□□□□ 0.26
CDKN1A-202ENST00000373711 CCDC196A0A1B0GTZ2 297 aa16.66■□□□□ 0.26
CDKN1A-202ENST00000373711 SPTLC1O15269 473 aa16.66■□□□□ 0.26
CDKN1A-202ENST00000373711 LILRB3O75022 631 aa16.66■□□□□ 0.26
CDKN1A-202ENST00000373711 CSDE1O75534 798 aaKnown RBP16.66■□□□□ 0.26
CDKN1A-202ENST00000373711 DCNP07585 359 aaKnown RBP16.66■□□□□ 0.26
CDKN1A-202ENST00000373711 FUT2Q10981 343 aa16.66■□□□□ 0.26
CDKN1A-202ENST00000373711 PFKFB3Q16875 520 aaPredicted RBP16.66■□□□□ 0.26
CDKN1A-202ENST00000373711 LONRF3Q496Y0 759 aa16.66■□□□□ 0.26
CDKN1A-202ENST00000373711 MTERF2Q49AM1 385 aa16.66■□□□□ 0.26
CDKN1A-202ENST00000373711 XKR3Q5GH77 459 aa16.66■□□□□ 0.26
CDKN1A-202ENST00000373711 CREB3L3Q68CJ9 461 aa16.66■□□□□ 0.26
CDKN1A-202ENST00000373711 DCLRE1AQ6PJP8 1040 aa16.66■□□□□ 0.26
CDKN1A-202ENST00000373711 GPR152Q8TDT2 470 aa16.66■□□□□ 0.26
CDKN1A-202ENST00000373711 RSAD2Q8WXG1 361 aa16.66■□□□□ 0.26
CDKN1A-202ENST00000373711 PHKBQ93100 1093 aa16.66■□□□□ 0.26
CDKN1A-202ENST00000373711 ZMYND12Q9H0C1 365 aa16.66■□□□□ 0.26
CDKN1A-202ENST00000373711 PLEKHA4Q9H4M7 779 aa16.66■□□□□ 0.26
CDKN1A-202ENST00000373711 SLC2A4RGQ9NR83 387 aa16.66■□□□□ 0.26
CDKN1A-202ENST00000373711 NCDNQ9UBB6 729 aa16.66■□□□□ 0.26
CDKN1A-202ENST00000373711 ZFP37Q9Y6Q3 630 aaPredicted RBP16.66■□□□□ 0.26
CDKN1A-202ENST00000373711 EPG5Q9HCE0 2579 aa16.66■□□□□ 0.26
CDKN1A-202ENST00000373711 C2CD2LO14523 706 aa16.65■□□□□ 0.26
CDKN1A-202ENST00000373711 CHMP2AO43633 222 aa16.65■□□□□ 0.26
CDKN1A-202ENST00000373711 N4BP1O75113 896 aaKnown RBP16.65■□□□□ 0.26
CDKN1A-202ENST00000373711 NR1I2O75469 434 aa16.65■□□□□ 0.26
CDKN1A-202ENST00000373711 GLUD2P49448 558 aa16.65■□□□□ 0.26
CDKN1A-202ENST00000373711 TARBP2Q15633 366 aaKnown RBP16.65■□□□□ 0.26
CDKN1A-202ENST00000373711 RSPO4Q2I0M5 234 aaPredicted RBP16.65■□□□□ 0.26
CDKN1A-202ENST00000373711 ZNF528Q3MIS6 628 aa16.65■□□□□ 0.26
CDKN1A-202ENST00000373711 BMP2KLQ5H9B9 411 aa16.65■□□□□ 0.26
CDKN1A-202ENST00000373711 RHPN2Q8IUC4 686 aa16.65■□□□□ 0.26
CDKN1A-202ENST00000373711 PJA1Q8NG27 643 aa16.65■□□□□ 0.26
CDKN1A-202ENST00000373711 NIFKQ9BYG3 293 aaKnown RBP16.65■□□□□ 0.26
CDKN1A-202ENST00000373711 UBN1Q9NPG3 1134 aa16.65■□□□□ 0.26
CDKN1A-202ENST00000373711 AGPAT5Q9NUQ2 364 aa16.65■□□□□ 0.26
CDKN1A-202ENST00000373711 ZDHHC7Q9NXF8 308 aa16.65■□□□□ 0.26
CDKN1A-202ENST00000373711 SUCLA2Q9P2R7 463 aaPredicted RBP16.65■□□□□ 0.26
CDKN1A-202ENST00000373711 PCDHB2Q9Y5E7 798 aa16.65■□□□□ 0.26
CDKN1A-202ENST00000373711 NRP1O14786 923 aa16.64■□□□□ 0.25
CDKN1A-202ENST00000373711 MAGEA9P43362 315 aa16.64■□□□□ 0.25
CDKN1A-202ENST00000373711 LRCH2Q5VUJ6 765 aa16.64■□□□□ 0.25
CDKN1A-202ENST00000373711 ZNF280BQ86YH2 543 aa16.64■□□□□ 0.25
CDKN1A-202ENST00000373711 EXOC8Q8IYI6 725 aa16.64■□□□□ 0.25
CDKN1A-202ENST00000373711 CNNM3Q8NE01 707 aa16.64■□□□□ 0.25
CDKN1A-202ENST00000373711 CCDC148Q8NFR7 591 aa16.64■□□□□ 0.25
CDKN1A-202ENST00000373711 FEZF2Q8TBJ5 459 aa16.64■□□□□ 0.25
CDKN1A-202ENST00000373711 NLRP4Q96MN2 994 aa16.64■□□□□ 0.25
CDKN1A-202ENST00000373711 MYADMQ96S97 322 aa16.64■□□□□ 0.25
CDKN1A-202ENST00000373711 BCO2Q9BYV7 579 aa16.64■□□□□ 0.25
CDKN1A-202ENST00000373711 LSG1Q9H089 658 aaKnown RBP16.64■□□□□ 0.25
CDKN1A-202ENST00000373711 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.64■□□□□ 0.25
CDKN1A-202ENST00000373711 DLGAP2Q9P1A6 1054 aa16.64■□□□□ 0.25
CDKN1A-202ENST00000373711 IGKV6-21A0A0C4DH24 114 aa16.63■□□□□ 0.25
CDKN1A-202ENST00000373711 MEIS3P2A8K0S8 358 aa16.63■□□□□ 0.25
CDKN1A-202ENST00000373711 TEX28O15482 410 aa16.63■□□□□ 0.25
CDKN1A-202ENST00000373711 LAMP2P13473 410 aa16.63■□□□□ 0.25
CDKN1A-202ENST00000373711 CREMQ03060 361 aa16.63■□□□□ 0.25
CDKN1A-202ENST00000373711 DRP2Q13474 957 aa16.63■□□□□ 0.25
CDKN1A-202ENST00000373711 NECTIN1Q15223 517 aa16.63■□□□□ 0.25
CDKN1A-202ENST00000373711 UGCGQ16739 394 aa16.63■□□□□ 0.25
CDKN1A-202ENST00000373711 AGMOQ6ZNB7 445 aa16.63■□□□□ 0.25
CDKN1A-202ENST00000373711 GET4Q7L5D6 327 aaPredicted RBP16.63■□□□□ 0.25
CDKN1A-202ENST00000373711 MIER3Q7Z3K6 550 aa16.63■□□□□ 0.25
CDKN1A-202ENST00000373711 FBXO4Q9UKT5 387 aa16.63■□□□□ 0.25
CDKN1A-202ENST00000373711 KLF18A0A0U1RQI7 1052 aa16.62■□□□□ 0.25
CDKN1A-202ENST00000373711 PRR5-ARHGAP8B1AHC4 643 aa16.62■□□□□ 0.25
CDKN1A-202ENST00000373711 MSH4O15457 936 aa16.62■□□□□ 0.25
CDKN1A-202ENST00000373711 LAMTOR5O43504 91 aa16.62■□□□□ 0.25
CDKN1A-202ENST00000373711 DDHD2O94830 711 aa16.62■□□□□ 0.25
CDKN1A-202ENST00000373711 PAPLNO95428 1278 aa16.62■□□□□ 0.25
CDKN1A-202ENST00000373711 STARD6P59095 220 aa16.62■□□□□ 0.25
CDKN1A-202ENST00000373711 ARHGAP8P85298 464 aa16.62■□□□□ 0.25
CDKN1A-202ENST00000373711 AKAP17AQ02040 695 aaKnown RBP16.62■□□□□ 0.25
CDKN1A-202ENST00000373711 LMNB2Q03252 620 aa16.62■□□□□ 0.25
CDKN1A-202ENST00000373711 VARS2Q5ST30 1063 aaKnown RBP16.62■□□□□ 0.25
CDKN1A-202ENST00000373711 KIAA0319Q5VV43 1072 aa16.62■□□□□ 0.25
CDKN1A-202ENST00000373711 MRPL10Q7Z7H8 261 aaKnown RBP16.62■□□□□ 0.25
CDKN1A-202ENST00000373711 DCLK2Q8N568 766 aa16.62■□□□□ 0.25
CDKN1A-202ENST00000373711 SUMF1Q8NBK3 374 aa16.62■□□□□ 0.25
CDKN1A-202ENST00000373711 SLC5A5Q92911 643 aa16.62■□□□□ 0.25
CDKN1A-202ENST00000373711 LENG9Q96B70 501 aa16.62■□□□□ 0.25
CDKN1A-202ENST00000373711 CNTNAP3BQ96NU0 1288 aa16.62■□□□□ 0.25
CDKN1A-202ENST00000373711 CNTNAP3Q9BZ76 1288 aa16.62■□□□□ 0.25
CDKN1A-202ENST00000373711 UNC45AQ9H3U1 944 aa16.62■□□□□ 0.25
CDKN1A-202ENST00000373711 RXFP1Q9HBX9 757 aa16.62■□□□□ 0.25
CDKN1A-202ENST00000373711 ANO2Q9NQ90 1003 aa16.62■□□□□ 0.25
CDKN1A-202ENST00000373711 NAP1L2Q9ULW6 460 aaPredicted RBP16.62■□□□□ 0.25
CDKN1A-202ENST00000373711 PRG3Q9Y2Y8 225 aaPredicted RBP16.62■□□□□ 0.25
CDKN1A-202ENST00000373711 PCDHGA2Q9Y5H1 932 aa16.62■□□□□ 0.25
CDKN1A-202ENST00000373711 ACACBO00763 2458 aa16.62■□□□□ 0.25
CDKN1A-202ENST00000373711 ANHXE9PGG2 379 aa16.61■□□□□ 0.25
CDKN1A-202ENST00000373711 DKC1O60832 514 aaKnown RBP eCLIP16.61■□□□□ 0.258e-30■■■■■ 47.9
CDKN1A-202ENST00000373711 MAFO75444 373 aaPredicted RBP16.61■□□□□ 0.25
CDKN1A-202ENST00000373711 RFPL2O75678 378 aa16.61■□□□□ 0.25
CDKN1A-202ENST00000373711 POMCP01189 267 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms