RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 LRRN2O75325 713 aa21.28■■□□□ 1
HDAC1-201ENST00000373548 ARIH2O95376 493 aa21.28■■□□□ 1
HDAC1-201ENST00000373548 KCTD2Q14681 263 aa21.28■■□□□ 1
HDAC1-201ENST00000373548 METTL7BQ6UX53 244 aa21.28■■□□□ 1
HDAC1-201ENST00000373548 OLIG1Q8TAK6 271 aa21.28■■□□□ 1
HDAC1-201ENST00000373548 FBXL18Q96ME1 805 aa21.28■■□□□ 1
HDAC1-201ENST00000373548 MMS19Q96T76 1030 aa21.28■■□□□ 1
HDAC1-201ENST00000373548 SIP14410 1827 aa21.28■■□□□ 1
HDAC1-201ENST00000373548 RFX1P22670 979 aa21.28■■□□□ 1
HDAC1-201ENST00000373548 TUBB4BP68371 445 aa21.28■■□□□ 1
HDAC1-201ENST00000373548 CETN1Q12798 172 aa21.28■■□□□ 1
HDAC1-201ENST00000373548 GPR162Q16538 588 aa21.28■■□□□ 1
HDAC1-201ENST00000373548 BRDTQ58F21 947 aaPredicted RBP21.28■■□□□ 1
HDAC1-201ENST00000373548 ALKBH5Q6P6C2 394 aaKnown RBP21.28■■□□□ 1
HDAC1-201ENST00000373548 ASAP3Q8TDY4 903 aa21.28■■□□□ 1
HDAC1-201ENST00000373548 SLC10A4Q96EP9 437 aa21.28■■□□□ 1
HDAC1-201ENST00000373548 CAPZA3Q96KX2 299 aa21.28■■□□□ 1
HDAC1-201ENST00000373548 TMEM117Q9H0C3 514 aa21.28■■□□□ 1
HDAC1-201ENST00000373548 PORCNQ9H237 461 aa21.28■■□□□ 1
HDAC1-201ENST00000373548 ANKZF1Q9H8Y5 726 aa21.28■■□□□ 1
HDAC1-201ENST00000373548 ARGLU1Q9NWB6 273 aaPredicted RBP21.28■■□□□ 1
HDAC1-201ENST00000373548 DDX41Q9UJV9 622 aaKnown RBP21.28■■□□□ 1
HDAC1-201ENST00000373548 H0YCG3 227 aa21.27■■□□□ 1
HDAC1-201ENST00000373548 DDX3XO00571 662 aaKnown RBP eCLIP21.27■■□□□ 12e-26■□□□□ 9.7
HDAC1-201ENST00000373548 HNRNPDLO14979 420 aaKnown RBP21.27■■□□□ 1
HDAC1-201ENST00000373548 ZNF185O15231 689 aa21.27■■□□□ 1
HDAC1-201ENST00000373548 PMM2O15305 246 aa21.27■■□□□ 1
HDAC1-201ENST00000373548 TCF7P36402 384 aaPredicted RBP21.27■■□□□ 1
HDAC1-201ENST00000373548 MXI1P50539 228 aa21.27■■□□□ 1
HDAC1-201ENST00000373548 STAT5BP51692 787 aa21.27■■□□□ 1
HDAC1-201ENST00000373548 ERVK-9P63128 1117 aa21.27■■□□□ 1
HDAC1-201ENST00000373548 TARBP2Q15633 366 aaKnown RBP21.27■■□□□ 1
HDAC1-201ENST00000373548 PNMA8AQ86V59 439 aaPredicted RBP21.27■■□□□ 1
HDAC1-201ENST00000373548 NOA1Q8NC60 698 aaKnown RBP21.27■■□□□ 1
HDAC1-201ENST00000373548 AFAP1L1Q8TED9 768 aa21.27■■□□□ 1
HDAC1-201ENST00000373548 SEPT1Q8WYJ6 367 aa21.27■■□□□ 1
HDAC1-201ENST00000373548 POMGNT1Q8WZA1 660 aa21.27■■□□□ 1
HDAC1-201ENST00000373548 MPHOSPH6Q99547 160 aaKnown RBP21.27■■□□□ 1
HDAC1-201ENST00000373548 MROH8Q9H579 483 aa21.27■■□□□ 1
HDAC1-201ENST00000373548 POTEJP0CG39 1038 aa21.26■□□□□ 0.99
HDAC1-201ENST00000373548 GLRA2P23416 452 aa21.26■□□□□ 0.99
HDAC1-201ENST00000373548 ARL2P36404 184 aa21.26■□□□□ 0.99
HDAC1-201ENST00000373548 NAP1L1P55209 391 aaKnown RBP21.26■□□□□ 0.99
HDAC1-201ENST00000373548 BMS1Q14692 1282 aaKnown RBP21.26■□□□□ 0.99
HDAC1-201ENST00000373548 ARHGAP44Q17R89 818 aa21.26■□□□□ 0.99
HDAC1-201ENST00000373548 WDR78Q5VTH9 848 aa21.26■□□□□ 0.99
HDAC1-201ENST00000373548 FAM160B1Q5W0V3 765 aa21.26■□□□□ 0.99
HDAC1-201ENST00000373548 VPS36Q86VN1 386 aa21.26■□□□□ 0.99
HDAC1-201ENST00000373548 ARHGEF19Q8IW93 802 aa21.26■□□□□ 0.99
HDAC1-201ENST00000373548 PARD3BQ8TEW8 1205 aa21.26■□□□□ 0.99
HDAC1-201ENST00000373548 BTNL10A8MVZ5 291 aa21.26■□□□□ 0.99
HDAC1-201ENST00000373548 CYP2C8P10632 490 aa21.26■□□□□ 0.99
HDAC1-201ENST00000373548 PRLRP16471 622 aa21.26■□□□□ 0.99
HDAC1-201ENST00000373548 MSANTD4Q8NCY6 345 aa21.26■□□□□ 0.99
HDAC1-201ENST00000373548 SLC7A3Q8WY07 619 aa21.26■□□□□ 0.99
HDAC1-201ENST00000373548 CCDC127Q96BQ5 260 aa21.26■□□□□ 0.99
HDAC1-201ENST00000373548 MFSD14AQ96MC6 490 aa21.26■□□□□ 0.99
HDAC1-201ENST00000373548 SYT11Q9BT88 431 aa21.26■□□□□ 0.99
HDAC1-201ENST00000373548 LRRIQ3A6PVS8 624 aaPredicted RBP21.25■□□□□ 0.99
HDAC1-201ENST00000373548 PDE2AO00408 941 aaPredicted RBP21.25■□□□□ 0.99
HDAC1-201ENST00000373548 GARTP22102 1010 aa21.25■□□□□ 0.99
HDAC1-201ENST00000373548 ABCD1P33897 745 aa21.25■□□□□ 0.99
HDAC1-201ENST00000373548 CKAP4Q07065 602 aaKnown RBP21.25■□□□□ 0.99
HDAC1-201ENST00000373548 DNAAF5Q86Y56 855 aa21.25■□□□□ 0.99
HDAC1-201ENST00000373548 SLC30A5Q8TAD4 765 aa21.25■□□□□ 0.99
HDAC1-201ENST00000373548 LNX1Q8TBB1 728 aaPredicted RBP21.25■□□□□ 0.99
HDAC1-201ENST00000373548 TMC2Q8TDI7 906 aa21.25■□□□□ 0.99
HDAC1-201ENST00000373548 KCNN1Q92952 543 aa21.25■□□□□ 0.99
HDAC1-201ENST00000373548 BICD1Q96G01 975 aa21.25■□□□□ 0.99
HDAC1-201ENST00000373548 TLR10Q9BXR5 811 aa21.25■□□□□ 0.99
HDAC1-201ENST00000373548 UBE2TQ9NPD8 197 aaPredicted RBP21.25■□□□□ 0.99
HDAC1-201ENST00000373548 NRBP2Q9NSY0 501 aa21.25■□□□□ 0.99
HDAC1-201ENST00000373548 KCNG1Q9UIX4 513 aa21.25■□□□□ 0.99
HDAC1-201ENST00000373548 USP20Q9Y2K6 914 aa21.25■□□□□ 0.99
HDAC1-201ENST00000373548 PCDHGC5Q9Y5F6 944 aa21.25■□□□□ 0.99
HDAC1-201ENST00000373548 ATP8B3O60423 1300 aa21.25■□□□□ 0.99
HDAC1-201ENST00000373548 FOXN3O00409 490 aaPredicted RBP21.25■□□□□ 0.99
HDAC1-201ENST00000373548 NCK2O43639 380 aa21.25■□□□□ 0.99
HDAC1-201ENST00000373548 RFC5P40937 340 aa21.25■□□□□ 0.99
HDAC1-201ENST00000373548 NAMPTP43490 491 aa21.25■□□□□ 0.99
HDAC1-201ENST00000373548 KCNV1Q6PIU1 500 aa21.25■□□□□ 0.99
HDAC1-201ENST00000373548 FMNL3Q8IVF7 1028 aa21.25■□□□□ 0.99
HDAC1-201ENST00000373548 GPD1LQ8N335 351 aa21.25■□□□□ 0.99
HDAC1-201ENST00000373548 SHCBP1Q8NEM2 672 aa21.25■□□□□ 0.99
HDAC1-201ENST00000373548 ZNF408Q9H9D4 720 aa21.25■□□□□ 0.99
HDAC1-201ENST00000373548 CLEC11AQ9Y240 323 aa21.25■□□□□ 0.99
HDAC1-201ENST00000373548 PALMO75781 387 aa21.24■□□□□ 0.99
HDAC1-201ENST00000373548 MAP2K1Q02750 393 aaPredicted RBP21.24■□□□□ 0.99
HDAC1-201ENST00000373548 CYP24A1Q07973 514 aa21.24■□□□□ 0.99
HDAC1-201ENST00000373548 CELF3Q5SZQ8 465 aaKnown RBP21.24■□□□□ 0.99
HDAC1-201ENST00000373548 MAP1SQ66K74 1059 aaPredicted RBP21.24■□□□□ 0.99
HDAC1-201ENST00000373548 NFRKBQ6P4R8 1299 aa21.24■□□□□ 0.99
HDAC1-201ENST00000373548 CREG2Q8IUH2 290 aa21.24■□□□□ 0.99
HDAC1-201ENST00000373548 FBXO16Q8IX29 292 aaPredicted RBP21.24■□□□□ 0.99
HDAC1-201ENST00000373548 MORC4Q8TE76 937 aa21.24■□□□□ 0.99
HDAC1-201ENST00000373548 COG1Q8WTW3 980 aa21.24■□□□□ 0.99
HDAC1-201ENST00000373548 OSBPL9Q96SU4 736 aa21.24■□□□□ 0.99
HDAC1-201ENST00000373548 POP1Q99575 1024 aaKnown RBP21.24■□□□□ 0.99
HDAC1-201ENST00000373548 HYOU1Q9Y4L1 999 aa21.24■□□□□ 0.99
HDAC1-201ENST00000373548 KIF22Q14807 665 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms