RNA–Protein interactions for RNA: ENST00000373243.6

NCDN-202, Transcript of neurochondrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCDN, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-202ENST00000373243 SCAF8Q9UPN6 1271 aaKnown RBP12.98□□□□□ -0.33
NCDN-202ENST00000373243 USH1CQ9Y6N9 552 aa12.98□□□□□ -0.33
NCDN-202ENST00000373243 AFF2P51816 1311 aa12.98□□□□□ -0.33
NCDN-202ENST00000373243 TESPA1A2RU30 521 aaPredicted RBP12.98□□□□□ -0.33
NCDN-202ENST00000373243 PPEF1O14829 653 aaPredicted RBP12.98□□□□□ -0.33
NCDN-202ENST00000373243 ZNF189O75820 626 aaPredicted RBP12.98□□□□□ -0.33
NCDN-202ENST00000373243 SOX5P35711 763 aa12.98□□□□□ -0.33
NCDN-202ENST00000373243 PPP4CP60510 307 aa12.98□□□□□ -0.33
NCDN-202ENST00000373243 PPP1R15BQ5SWA1 713 aa12.98□□□□□ -0.33
NCDN-202ENST00000373243 CCDC137Q6PK04 289 aaKnown RBP12.98□□□□□ -0.33
NCDN-202ENST00000373243 LMNTD2Q8IXW0 634 aa12.98□□□□□ -0.33
NCDN-202ENST00000373243 FBXO25Q8TCJ0 367 aa12.98□□□□□ -0.33
NCDN-202ENST00000373243 RFFLQ8WZ73 363 aa12.98□□□□□ -0.33
NCDN-202ENST00000373243 CAVIN3Q969G5 261 aa12.98□□□□□ -0.33
NCDN-202ENST00000373243 MTMR9Q96QG7 549 aa12.98□□□□□ -0.33
NCDN-202ENST00000373243 INTS2Q9H0H0 1204 aaKnown RBP12.98□□□□□ -0.33
NCDN-202ENST00000373243 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.98□□□□□ -0.33
NCDN-202ENST00000373243 SRCAPQ6ZRS2 3230 aa12.97□□□□□ -0.33
NCDN-202ENST00000373243 PASKQ96RG2 1323 aa12.97□□□□□ -0.33
NCDN-202ENST00000373243 RNF8O76064 485 aa12.97□□□□□ -0.33
NCDN-202ENST00000373243 GAS8O95995 478 aa12.97□□□□□ -0.33
NCDN-202ENST00000373243 MXI1P50539 228 aa12.97□□□□□ -0.33
NCDN-202ENST00000373243 SETDB1Q15047 1291 aa12.97□□□□□ -0.33
NCDN-202ENST00000373243 LONRF1Q17RB8 773 aa12.97□□□□□ -0.33
NCDN-202ENST00000373243 PRR5LQ6MZQ0 368 aa12.97□□□□□ -0.33
NCDN-202ENST00000373243 FRMD5Q7Z6J6 570 aa12.97□□□□□ -0.33
NCDN-202ENST00000373243 ANKRD23Q86SG2 305 aa12.97□□□□□ -0.33
NCDN-202ENST00000373243 NCAPG2Q86XI2 1143 aa12.97□□□□□ -0.33
NCDN-202ENST00000373243 PRCCQ92733 491 aaPredicted RBP12.97□□□□□ -0.33
NCDN-202ENST00000373243 HAS1Q92839 578 aa12.97□□□□□ -0.33
NCDN-202ENST00000373243 RBM41Q96IZ5 413 aaKnown RBP12.97□□□□□ -0.33
NCDN-202ENST00000373243 EMSYQ7Z589 1322 aa12.97□□□□□ -0.33
NCDN-202ENST00000373243 BBOX1O75936 387 aa12.97□□□□□ -0.33
NCDN-202ENST00000373243 FOSP01100 380 aaPredicted RBP12.97□□□□□ -0.33
NCDN-202ENST00000373243 LINGO3P0C6S8 592 aa12.97□□□□□ -0.33
NCDN-202ENST00000373243 SHROOM1Q2M3G4 852 aaPredicted RBP12.97□□□□□ -0.33
NCDN-202ENST00000373243 DNAJC14Q6Y2X3 702 aaPredicted RBP12.97□□□□□ -0.33
NCDN-202ENST00000373243 OGFOD1Q8N543 542 aa12.97□□□□□ -0.33
NCDN-202ENST00000373243 DNAJC19Q96DA6 116 aa12.97□□□□□ -0.33
NCDN-202ENST00000373243 YIPF2Q9BWQ6 316 aa12.97□□□□□ -0.33
NCDN-202ENST00000373243 ARHGEF10LQ9HCE6 1279 aa12.97□□□□□ -0.33
NCDN-202ENST00000373243 BLOC1S6Q9UL45 172 aa12.97□□□□□ -0.33
NCDN-202ENST00000373243 WDR91A4D1P6 747 aa12.97□□□□□ -0.33
NCDN-202ENST00000373243 MAGEA10P43363 369 aaPredicted RBP12.97□□□□□ -0.33
NCDN-202ENST00000373243 PEX3P56589 373 aa12.97□□□□□ -0.33
NCDN-202ENST00000373243 SESN3P58005 492 aa12.97□□□□□ -0.33
NCDN-202ENST00000373243 SKOR1P84550 965 aa12.97□□□□□ -0.33
NCDN-202ENST00000373243 HGSNATQ68CP4 663 aa12.97□□□□□ -0.33
NCDN-202ENST00000373243 SRRM1Q8IYB3 904 aaKnown RBP12.97□□□□□ -0.33
NCDN-202ENST00000373243 C18orf8Q96DM3 657 aa12.97□□□□□ -0.33
NCDN-202ENST00000373243 RIOX1Q9H6W3 641 aa12.97□□□□□ -0.33
NCDN-202ENST00000373243 TMBIM4Q9HC24 238 aa12.97□□□□□ -0.33
NCDN-202ENST00000373243 PPP1R9AQ9ULJ8 1098 aa12.97□□□□□ -0.33
NCDN-202ENST00000373243 ALG6Q9Y672 507 aa12.97□□□□□ -0.33
NCDN-202ENST00000373243 ZC3H4Q9UPT8 1303 aaKnown RBP12.96□□□□□ -0.33
NCDN-202ENST00000373243 DPPA5A6NC42 116 aa12.96□□□□□ -0.33
NCDN-202ENST00000373243 PDXKO00764 312 aa12.96□□□□□ -0.33
NCDN-202ENST00000373243 FGRP09769 529 aa12.96□□□□□ -0.33
NCDN-202ENST00000373243 ZNF131P52739 623 aa12.96□□□□□ -0.33
NCDN-202ENST00000373243 ZNF844Q08AG5 666 aa12.96□□□□□ -0.33
NCDN-202ENST00000373243 KIF2BQ8N4N8 673 aa12.96□□□□□ -0.33
NCDN-202ENST00000373243 KIFAP3Q92845 792 aa12.96□□□□□ -0.33
NCDN-202ENST00000373243 HAUS1Q96CS2 278 aa12.96□□□□□ -0.33
NCDN-202ENST00000373243 PLEKHG4BQ96PX9 1271 aa12.96□□□□□ -0.33
NCDN-202ENST00000373243 POLLQ9UGP5 575 aa12.96□□□□□ -0.33
NCDN-202ENST00000373243 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.96□□□□□ -0.33
NCDN-202ENST00000373243 ARFGEF2Q9Y6D5 1785 aa12.96□□□□□ -0.33
NCDN-202ENST00000373243 TUBGCP6Q96RT7 1819 aa12.96□□□□□ -0.33
NCDN-202ENST00000373243 ATXN2Q99700 1313 aaKnown RBP12.96□□□□□ -0.33
NCDN-202ENST00000373243 CYP26A1O43174 497 aa12.96□□□□□ -0.34
NCDN-202ENST00000373243 PAX3P23760 479 aa12.96□□□□□ -0.34
NCDN-202ENST00000373243 MAPK4P31152 587 aa12.96□□□□□ -0.34
NCDN-202ENST00000373243 FMO5P49326 533 aa12.96□□□□□ -0.34
NCDN-202ENST00000373243 GIT2Q14161 759 aa12.96□□□□□ -0.34
NCDN-202ENST00000373243 QPCTQ16769 361 aa12.96□□□□□ -0.34
NCDN-202ENST00000373243 KIAA1755Q5JYT7 1200 aa12.96□□□□□ -0.34
NCDN-202ENST00000373243 PASD1Q8IV76 773 aa12.96□□□□□ -0.34
NCDN-202ENST00000373243 DDX4Q9NQI0 724 aaKnown RBP12.96□□□□□ -0.34
NCDN-202ENST00000373243 KLHL14Q9P2G3 628 aa12.96□□□□□ -0.34
NCDN-202ENST00000373243 PI4KBQ9UBF8 816 aa12.96□□□□□ -0.34
NCDN-202ENST00000373243 TTC7AQ9ULT0 858 aaPredicted RBP12.96□□□□□ -0.34
NCDN-202ENST00000373243 TRPM3Q9HCF6 1732 aaPredicted RBP12.96□□□□□ -0.34
NCDN-202ENST00000373243 FOXN3O00409 490 aaPredicted RBP12.95□□□□□ -0.34
NCDN-202ENST00000373243 MAGEA8P43361 318 aa12.95□□□□□ -0.34
NCDN-202ENST00000373243 CRKP46108 304 aa12.95□□□□□ -0.34
NCDN-202ENST00000373243 PDE6CP51160 858 aa12.95□□□□□ -0.34
NCDN-202ENST00000373243 TMED2Q15363 201 aa12.95□□□□□ -0.34
NCDN-202ENST00000373243 PPP4R3AQ6IN85 833 aa12.95□□□□□ -0.34
NCDN-202ENST00000373243 JAMLQ86YT9 394 aa12.95□□□□□ -0.34
NCDN-202ENST00000373243 IQCKQ8N0W5 287 aa12.95□□□□□ -0.34
NCDN-202ENST00000373243 POMGNT1Q8WZA1 660 aa12.95□□□□□ -0.34
NCDN-202ENST00000373243 ARHGEF2Q92974 986 aaKnown RBP12.95□□□□□ -0.34
NCDN-202ENST00000373243 XPO6Q96QU8 1125 aaKnown RBP12.95□□□□□ -0.34
NCDN-202ENST00000373243 NACC1Q96RE7 527 aa12.95□□□□□ -0.34
NCDN-202ENST00000373243 TSPYL2Q9H2G4 693 aaPredicted RBP12.95□□□□□ -0.34
NCDN-202ENST00000373243 SLITRK6Q9H5Y7 841 aa12.95□□□□□ -0.34
NCDN-202ENST00000373243 ACP6Q9NPH0 428 aa12.95□□□□□ -0.34
NCDN-202ENST00000373243 PARP2Q9UGN5 583 aa12.95□□□□□ -0.34
NCDN-202ENST00000373243 SERPINA10Q9UK55 444 aa12.95□□□□□ -0.34
NCDN-202ENST00000373243 ZNF148Q9UQR1 794 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms