RNA–Protein interactions for RNA: ENST00000372237.7

TMEM53-202, Transcript of transmembrane protein 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM53, Length 2,310 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-202ENST00000372237 FTLP02792 175 aaPredicted RBP20.66■□□□□ 0.9
TMEM53-202ENST00000372237 VCAM1P19320 739 aa20.66■□□□□ 0.9
TMEM53-202ENST00000372237 BAG6P46379 1132 aa20.66■□□□□ 0.9
TMEM53-202ENST00000372237 VAMP7P51809 220 aa20.66■□□□□ 0.9
TMEM53-202ENST00000372237 HADHBP55084 474 aaKnown RBP20.66■□□□□ 0.9
TMEM53-202ENST00000372237 EIF3BP55884 814 aaKnown RBP20.66■□□□□ 0.9
TMEM53-202ENST00000372237 SPDYCQ5MJ68 293 aa20.66■□□□□ 0.9
TMEM53-202ENST00000372237 ICE2Q659A1 982 aa20.66■□□□□ 0.9
TMEM53-202ENST00000372237 UBL4BQ8N7F7 174 aa20.66■□□□□ 0.9
TMEM53-202ENST00000372237 PKD2L1Q9P0L9 805 aa20.66■□□□□ 0.9
TMEM53-202ENST00000372237 CNOT8Q9UFF9 292 aaKnown RBP20.66■□□□□ 0.9
TMEM53-202ENST00000372237 YDJCA8MPS7 323 aa20.66■□□□□ 0.9
TMEM53-202ENST00000372237 DCDC2CA8MYV0 355 aa20.66■□□□□ 0.9
TMEM53-202ENST00000372237 TISP43B9A030 160 aa20.66■□□□□ 0.9
TMEM53-202ENST00000372237 TRAPPC3O43617 180 aa20.66■□□□□ 0.9
TMEM53-202ENST00000372237 IFT88Q13099 833 aa20.66■□□□□ 0.9
TMEM53-202ENST00000372237 RNF187Q5TA31 235 aaPredicted RBP20.66■□□□□ 0.9
TMEM53-202ENST00000372237 JAMLQ86YT9 394 aa20.66■□□□□ 0.9
TMEM53-202ENST00000372237 ARHGEF19Q8IW93 802 aa20.66■□□□□ 0.9
TMEM53-202ENST00000372237 SUPT20HQ8NEM7 779 aa20.66■□□□□ 0.9
TMEM53-202ENST00000372237 NEK9Q8TD19 979 aa20.66■□□□□ 0.9
TMEM53-202ENST00000372237 PSMD1Q99460 953 aa20.66■□□□□ 0.9
TMEM53-202ENST00000372237 RIT2Q99578 217 aa20.66■□□□□ 0.9
TMEM53-202ENST00000372237 MXRA8Q9BRK3 442 aa20.66■□□□□ 0.9
TMEM53-202ENST00000372237 RASAL2Q9UJF2 1139 aa20.66■□□□□ 0.9
TMEM53-202ENST00000372237 GGA2Q9UJY4 613 aa20.66■□□□□ 0.9
TMEM53-202ENST00000372237 PFASO15067 1338 aa20.65■□□□□ 0.9
TMEM53-202ENST00000372237 MIF4GDA9UHW6 222 aaKnown RBP20.65■□□□□ 0.9
TMEM53-202ENST00000372237 PPIP5K2O43314 1243 aa20.65■□□□□ 0.9
TMEM53-202ENST00000372237 GCLMP48507 274 aa20.65■□□□□ 0.9
TMEM53-202ENST00000372237 PPP3CAQ08209 521 aa20.65■□□□□ 0.9
TMEM53-202ENST00000372237 C11orf63Q6NUN7 778 aa20.65■□□□□ 0.9
TMEM53-202ENST00000372237 AADACL2Q6P093 401 aa20.65■□□□□ 0.9
TMEM53-202ENST00000372237 MIER3Q7Z3K6 550 aa20.65■□□□□ 0.9
TMEM53-202ENST00000372237 VTI1AQ96AJ9 217 aa20.65■□□□□ 0.9
TMEM53-202ENST00000372237 TXLNGYQ9BZA5 131 aa20.65■□□□□ 0.9
TMEM53-202ENST00000372237 ZDHHC18Q9NUE0 388 aa20.65■□□□□ 0.9
TMEM53-202ENST00000372237 ZBTB21Q9ULJ3 1066 aa20.65■□□□□ 0.9
TMEM53-202ENST00000372237 FSBPO95073 299 aa20.65■□□□□ 0.9
TMEM53-202ENST00000372237 USP8P40818 1118 aa20.65■□□□□ 0.9
TMEM53-202ENST00000372237 PLTPP55058 493 aa20.65■□□□□ 0.9
TMEM53-202ENST00000372237 LDHDQ86WU2 507 aa20.65■□□□□ 0.9
TMEM53-202ENST00000372237 RPUSD2Q8IZ73 545 aaKnown RBP20.65■□□□□ 0.9
TMEM53-202ENST00000372237 TTLL6Q8N841 843 aa20.65■□□□□ 0.9
TMEM53-202ENST00000372237 C3orf20Q8ND61 904 aa20.65■□□□□ 0.9
TMEM53-202ENST00000372237 TMEM110-MUSTN1A8MSY1 372 aa20.64■□□□□ 0.89
TMEM53-202ENST00000372237 P4HA2O15460 535 aa20.64■□□□□ 0.89
TMEM53-202ENST00000372237 GPC5P78333 572 aa20.64■□□□□ 0.89
TMEM53-202ENST00000372237 ALCAMQ13740 583 aa20.64■□□□□ 0.89
TMEM53-202ENST00000372237 C18orf8Q96DM3 657 aa20.64■□□□□ 0.89
TMEM53-202ENST00000372237 CBWD1Q9BRT8 395 aa20.64■□□□□ 0.89
TMEM53-202ENST00000372237 LRRC4CQ9HCJ2 640 aa20.64■□□□□ 0.89
TMEM53-202ENST00000372237 SNX24Q9Y343 169 aa20.64■□□□□ 0.89
TMEM53-202ENST00000372237 CLRN2A0PK11 232 aa20.64■□□□□ 0.89
TMEM53-202ENST00000372237 PHF2O75151 1096 aa20.64■□□□□ 0.89
TMEM53-202ENST00000372237 EPC2Q52LR7 807 aa20.64■□□□□ 0.89
TMEM53-202ENST00000372237 ZNF746Q6NUN9 644 aaPredicted RBP20.64■□□□□ 0.89
TMEM53-202ENST00000372237 HOOK3Q86VS8 718 aa20.64■□□□□ 0.89
TMEM53-202ENST00000372237 KRT35Q92764 455 aa20.64■□□□□ 0.89
TMEM53-202ENST00000372237 ACCSQ96QU6 501 aa20.64■□□□□ 0.89
TMEM53-202ENST00000372237 VCPKMTQ9H867 229 aa20.64■□□□□ 0.89
TMEM53-202ENST00000372237 P4HBP07237 508 aaKnown RBP20.63■□□□□ 0.89
TMEM53-202ENST00000372237 ITGB5P18084 799 aa20.63■□□□□ 0.89
TMEM53-202ENST00000372237 CDR1P51861 262 aa20.63■□□□□ 0.89
TMEM53-202ENST00000372237 PMS2P54278 862 aa20.63■□□□□ 0.89
TMEM53-202ENST00000372237 FAM160B2Q86V87 743 aa20.63■□□□□ 0.89
TMEM53-202ENST00000372237 CNPY4Q8N129 248 aa20.63■□□□□ 0.89
TMEM53-202ENST00000372237 ZSWIM1Q9BR11 485 aa20.63■□□□□ 0.89
TMEM53-202ENST00000372237 KCNH7Q9NS40 1196 aa20.63■□□□□ 0.89
TMEM53-202ENST00000372237 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.63■□□□□ 0.89
TMEM53-202ENST00000372237 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.63■□□□□ 0.89
TMEM53-202ENST00000372237 KIAA0391O15091 583 aaKnown RBP20.62■□□□□ 0.89
TMEM53-202ENST00000372237 RTN2O75298 545 aa20.62■□□□□ 0.89
TMEM53-202ENST00000372237 PAEPP09466 180 aa20.62■□□□□ 0.89
TMEM53-202ENST00000372237 HSPA6P17066 643 aa20.62■□□□□ 0.89
TMEM53-202ENST00000372237 CHRNA3P32297 505 aa20.62■□□□□ 0.89
TMEM53-202ENST00000372237 SUGP1Q8IWZ8 645 aaKnown RBP20.62■□□□□ 0.89
TMEM53-202ENST00000372237 PRPF38AQ8NAV1 312 aaKnown RBP20.62■□□□□ 0.89
TMEM53-202ENST00000372237 XXYLT1Q8NBI6 393 aa20.62■□□□□ 0.89
TMEM53-202ENST00000372237 FBXO25Q8TCJ0 367 aa20.62■□□□□ 0.89
TMEM53-202ENST00000372237 RAPGEF5Q92565 580 aa20.62■□□□□ 0.89
TMEM53-202ENST00000372237 PABPC3Q9H361 631 aaKnown RBP20.62■□□□□ 0.89
TMEM53-202ENST00000372237 FBXO28Q9NVF7 368 aa20.62■□□□□ 0.89
TMEM53-202ENST00000372237 ZHX2Q9Y6X8 837 aa20.62■□□□□ 0.89
TMEM53-202ENST00000372237 MAPTP10636 758 aaKnown RBP20.62■□□□□ 0.89
TMEM53-202ENST00000372237 KCNA3P22001 575 aa20.62■□□□□ 0.89
TMEM53-202ENST00000372237 MARCKSL1P49006 195 aa20.62■□□□□ 0.89
TMEM53-202ENST00000372237 FNTAP49354 379 aa20.62■□□□□ 0.89
TMEM53-202ENST00000372237 DRG2P55039 364 aaKnown RBP20.62■□□□□ 0.89
TMEM53-202ENST00000372237 MESDQ14696 234 aa20.62■□□□□ 0.89
TMEM53-202ENST00000372237 TNIP1Q15025 636 aa20.62■□□□□ 0.89
TMEM53-202ENST00000372237 GRIPAP1Q4V328 841 aa20.62■□□□□ 0.89
TMEM53-202ENST00000372237 SEL1L2Q5TEA6 688 aa20.62■□□□□ 0.89
TMEM53-202ENST00000372237 C6orf89Q6UWU4 347 aa20.62■□□□□ 0.89
TMEM53-202ENST00000372237 HSPBP1Q9NZL4 362 aa20.62■□□□□ 0.89
TMEM53-202ENST00000372237 CHORDC1Q9UHD1 332 aaPredicted RBP20.62■□□□□ 0.89
TMEM53-202ENST00000372237 DDX20Q9UHI6 824 aaKnown RBP20.62■□□□□ 0.89
TMEM53-202ENST00000372237 TULP1O00294 542 aaPredicted RBP20.61■□□□□ 0.89
TMEM53-202ENST00000372237 CAND2O75155 1236 aa20.61■□□□□ 0.89
TMEM53-202ENST00000372237 NUDT17P0C025 328 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms