RNA–Protein interactions for RNA: ENST00000372195.5

RAPGEF1-203, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-203ENST00000372195 AXIN2Q9Y2T1 843 aa25.47■■□□□ 1.67
RAPGEF1-203ENST00000372195 NPHP4O75161 1426 aaPredicted RBP25.47■■□□□ 1.67
RAPGEF1-203ENST00000372195 SNX2O60749 519 aa25.47■■□□□ 1.67
RAPGEF1-203ENST00000372195 TRIM15Q9C019 465 aa25.47■■□□□ 1.67
RAPGEF1-203ENST00000372195 UTYO14607 1347 aa25.46■■□□□ 1.67
RAPGEF1-203ENST00000372195 MIF4GDA9UHW6 222 aaKnown RBP25.46■■□□□ 1.67
RAPGEF1-203ENST00000372195 STXBP2Q15833 593 aa25.46■■□□□ 1.67
RAPGEF1-203ENST00000372195 CHP1Q99653 195 aa25.46■■□□□ 1.67
RAPGEF1-203ENST00000372195 MOSPD1Q9UJG1 213 aa25.46■■□□□ 1.67
RAPGEF1-203ENST00000372195 MAPK6Q16659 721 aa25.46■■□□□ 1.67
RAPGEF1-203ENST00000372195 FAM217BQ9NTX9 383 aaPredicted RBP25.46■■□□□ 1.67
RAPGEF1-203ENST00000372195 HAUS5O94927 633 aa25.46■■□□□ 1.67
RAPGEF1-203ENST00000372195 ICE2Q659A1 982 aa25.46■■□□□ 1.67
RAPGEF1-203ENST00000372195 VSNL1P62760 191 aa25.46■■□□□ 1.67
RAPGEF1-203ENST00000372195 FMR1Q06787 632 aaKnown RBP eCLIP25.46■■□□□ 1.671e-6■■□□□ 13.4
RAPGEF1-203ENST00000372195 TTC30AQ86WT1 665 aa25.46■■□□□ 1.67
RAPGEF1-203ENST00000372195 PARP9Q8IXQ6 854 aa25.46■■□□□ 1.67
RAPGEF1-203ENST00000372195 GANCQ8TET4 914 aa25.46■■□□□ 1.67
RAPGEF1-203ENST00000372195 CPSF1Q10570 1443 aaKnown RBP25.46■■□□□ 1.67
RAPGEF1-203ENST00000372195 E2F6O75461 281 aa25.46■■□□□ 1.67
RAPGEF1-203ENST00000372195 POLR3CQ9BUI4 534 aaPredicted RBP25.46■■□□□ 1.67
RAPGEF1-203ENST00000372195 KRT17Q04695 432 aa25.45■■□□□ 1.67
RAPGEF1-203ENST00000372195 ACAD11Q709F0 780 aa25.45■■□□□ 1.67
RAPGEF1-203ENST00000372195 SNF8Q96H20 258 aa25.45■■□□□ 1.67
RAPGEF1-203ENST00000372195 LRRC37BQ96QE4 947 aa25.45■■□□□ 1.67
RAPGEF1-203ENST00000372195 YY1AP1Q9H869 796 aa25.45■■□□□ 1.67
RAPGEF1-203ENST00000372195 CD209Q9NNX6 404 aa25.45■■□□□ 1.67
RAPGEF1-203ENST00000372195 NMT1P30419 496 aaKnown RBP25.45■■□□□ 1.66
RAPGEF1-203ENST00000372195 GPSM2P81274 684 aa25.45■■□□□ 1.66
RAPGEF1-203ENST00000372195 FGFR1OP2Q9NVK5 253 aa25.45■■□□□ 1.66
RAPGEF1-203ENST00000372195 CFAP69A5D8W1 941 aa25.45■■□□□ 1.66
RAPGEF1-203ENST00000372195 MCF2P10911 925 aa25.45■■□□□ 1.66
RAPGEF1-203ENST00000372195 QRICH1Q2TAL8 776 aa25.45■■□□□ 1.66
RAPGEF1-203ENST00000372195 RCSD1Q6JBY9 416 aa25.45■■□□□ 1.66
RAPGEF1-203ENST00000372195 SRBD1Q8N5C6 995 aaKnown RBP25.45■■□□□ 1.66
RAPGEF1-203ENST00000372195 ATP6V1G3Q96LB4 118 aa25.45■■□□□ 1.66
RAPGEF1-203ENST00000372195 CYP26A1O43174 497 aa25.45■■□□□ 1.66
RAPGEF1-203ENST00000372195 LCP1P13796 627 aa25.45■■□□□ 1.66
RAPGEF1-203ENST00000372195 IREB2P48200 963 aaKnown RBP25.45■■□□□ 1.66
RAPGEF1-203ENST00000372195 MID2Q9UJV3 735 aa25.45■■□□□ 1.66
RAPGEF1-203ENST00000372195 FEM1BQ9UK73 627 aa25.45■■□□□ 1.66
RAPGEF1-203ENST00000372195 ZBTB22O15209 634 aa25.45■■□□□ 1.66
RAPGEF1-203ENST00000372195 ROR1Q01973 937 aa25.45■■□□□ 1.66
RAPGEF1-203ENST00000372195 PDXDC1Q6P996 788 aa25.45■■□□□ 1.66
RAPGEF1-203ENST00000372195 BZW1Q7L1Q6 419 aaKnown RBP25.45■■□□□ 1.66
RAPGEF1-203ENST00000372195 LIMA1Q9UHB6 759 aaKnown RBP25.45■■□□□ 1.66
RAPGEF1-203ENST00000372195 ANO9A1A5B4 782 aa25.44■■□□□ 1.66
RAPGEF1-203ENST00000372195 ANP32DO95626 131 aa25.44■■□□□ 1.66
RAPGEF1-203ENST00000372195 FOXO4P98177 505 aa25.44■■□□□ 1.66
RAPGEF1-203ENST00000372195 DALRD3Q5D0E6 543 aaKnown RBP25.44■■□□□ 1.66
RAPGEF1-203ENST00000372195 SLC30A5Q8TAD4 765 aa25.44■■□□□ 1.66
RAPGEF1-203ENST00000372195 ZNF507Q8TCN5 953 aa25.44■■□□□ 1.66
RAPGEF1-203ENST00000372195 SNX19Q92543 992 aa25.44■■□□□ 1.66
RAPGEF1-203ENST00000372195 MOCS2O96007 188 aaPredicted RBP25.44■■□□□ 1.66
RAPGEF1-203ENST00000372195 DNAJC6O75061 913 aa25.44■■□□□ 1.66
RAPGEF1-203ENST00000372195 CALB1P05937 261 aa25.44■■□□□ 1.66
RAPGEF1-203ENST00000372195 KLHL38Q2WGJ6 581 aa25.44■■□□□ 1.66
RAPGEF1-203ENST00000372195 IZUMO3Q5VZ72 239 aa25.44■■□□□ 1.66
RAPGEF1-203ENST00000372195 SH2D3CQ8N5H7 860 aa25.44■■□□□ 1.66
RAPGEF1-203ENST00000372195 CFAP74Q9C0B2 1584 aa25.44■■□□□ 1.66
RAPGEF1-203ENST00000372195 MASTLQ96GX5 879 aa25.44■■□□□ 1.66
RAPGEF1-203ENST00000372195 AFF4Q9UHB7 1163 aaKnown RBP25.44■■□□□ 1.66
RAPGEF1-203ENST00000372195 KRT38O76015 456 aa25.44■■□□□ 1.66
RAPGEF1-203ENST00000372195 ESRRBO95718 433 aa25.44■■□□□ 1.66
RAPGEF1-203ENST00000372195 GIPC2Q8TF65 315 aa25.44■■□□□ 1.66
RAPGEF1-203ENST00000372195 CCDC124Q96CT7 223 aaKnown RBP25.44■■□□□ 1.66
RAPGEF1-203ENST00000372195 OSBPL1AQ9BXW6 950 aa25.44■■□□□ 1.66
RAPGEF1-203ENST00000372195 LMCD1Q9NZU5 365 aa25.44■■□□□ 1.66
RAPGEF1-203ENST00000372195 MROH7-TTC4A0A0A0MT08 1334 aa25.43■■□□□ 1.66
RAPGEF1-203ENST00000372195 ARFIP2P53365 341 aa25.43■■□□□ 1.66
RAPGEF1-203ENST00000372195 WRNIP1Q96S55 665 aa25.43■■□□□ 1.66
RAPGEF1-203ENST00000372195 C16orf87Q6PH81 154 aa25.43■■□□□ 1.66
RAPGEF1-203ENST00000372195 SLC10A4Q96EP9 437 aa25.43■■□□□ 1.66
RAPGEF1-203ENST00000372195 SHROOM2Q13796 1616 aa25.43■■□□□ 1.66
RAPGEF1-203ENST00000372195 PVALEFA0A1B0GWK0 134 aa25.43■■□□□ 1.66
RAPGEF1-203ENST00000372195 CACNB2Q08289 660 aaPredicted RBP25.43■■□□□ 1.66
RAPGEF1-203ENST00000372195 ETNK1Q9HBU6 452 aa25.43■■□□□ 1.66
RAPGEF1-203ENST00000372195 WARS2Q9UGM6 360 aaKnown RBP25.43■■□□□ 1.66
RAPGEF1-203ENST00000372195 SUN2Q9UH99 717 aa25.43■■□□□ 1.66
RAPGEF1-203ENST00000372195 IP6K2Q9UHH9 426 aa25.43■■□□□ 1.66
RAPGEF1-203ENST00000372195 RBBP7Q16576 425 aa25.43■■□□□ 1.66
RAPGEF1-203ENST00000372195 RC3H1Q5TC82 1133 aaKnown RBP25.43■■□□□ 1.66
RAPGEF1-203ENST00000372195 TWF2Q6IBS0 349 aaKnown RBP25.43■■□□□ 1.66
RAPGEF1-203ENST00000372195 TRIM51Q9BSJ1 452 aa25.43■■□□□ 1.66
RAPGEF1-203ENST00000372195 RGL1Q9NZL6 768 aa25.43■■□□□ 1.66
RAPGEF1-203ENST00000372195 FAM8A1Q9UBU6 413 aa25.43■■□□□ 1.66
RAPGEF1-203ENST00000372195 FBXO2Q9UK22 296 aaPredicted RBP25.43■■□□□ 1.66
RAPGEF1-203ENST00000372195 MBD5Q9P267 1494 aa25.43■■□□□ 1.66
RAPGEF1-203ENST00000372195 ZBTB17Q13105 803 aa25.42■■□□□ 1.66
RAPGEF1-203ENST00000372195 AFG1LQ8WV93 481 aa25.42■■□□□ 1.66
RAPGEF1-203ENST00000372195 DHX35Q9H5Z1 703 aaKnown RBP25.42■■□□□ 1.66
RAPGEF1-203ENST00000372195 LMNAP02545 664 aaKnown RBP25.42■■□□□ 1.66
RAPGEF1-203ENST00000372195 KLK7P49862 253 aa25.42■■□□□ 1.66
RAPGEF1-203ENST00000372195 VPS39Q96JC1 886 aa25.42■■□□□ 1.66
RAPGEF1-203ENST00000372195 FAM118BQ9BPY3 351 aa25.42■■□□□ 1.66
RAPGEF1-203ENST00000372195 SLITRK6Q9H5Y7 841 aa25.42■■□□□ 1.66
RAPGEF1-203ENST00000372195 SLC9A2Q9UBY0 812 aa25.42■■□□□ 1.66
RAPGEF1-203ENST00000372195 GRID2IPA4D2P6 1211 aa25.42■■□□□ 1.66
RAPGEF1-203ENST00000372195 FSCBQ5H9T9 825 aa25.42■■□□□ 1.66
RAPGEF1-203ENST00000372195 ARSEP51690 589 aa25.42■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms