RNA–Protein interactions for RNA: ENST00000372077.8

VEGFA-206, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 2,834 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-206ENST00000372077 MTG1Q9BT17 334 aaPredicted RBP20.18■□□□□ 0.82
VEGFA-206ENST00000372077 TMEM206Q9H813 350 aa20.18■□□□□ 0.82
VEGFA-206ENST00000372077 HMX1Q9NP08 348 aaPredicted RBP20.18■□□□□ 0.82
VEGFA-206ENST00000372077 VGLL3A8MV65 326 aa20.18■□□□□ 0.82
VEGFA-206ENST00000372077 MSCO60682 206 aa20.18■□□□□ 0.82
VEGFA-206ENST00000372077 ABCD1P33897 745 aa20.18■□□□□ 0.82
VEGFA-206ENST00000372077 FKBP3Q00688 224 aaKnown RBP20.18■□□□□ 0.82
VEGFA-206ENST00000372077 MXD4Q14582 209 aaPredicted RBP20.18■□□□□ 0.82
VEGFA-206ENST00000372077 NFIL3Q16649 462 aa20.18■□□□□ 0.82
VEGFA-206ENST00000372077 ZBTB10Q96DT7 871 aa20.18■□□□□ 0.82
VEGFA-206ENST00000372077 KIFC3Q9BVG8 833 aa20.18■□□□□ 0.82
VEGFA-206ENST00000372077 SUCLA2Q9P2R7 463 aaPredicted RBP20.18■□□□□ 0.82
VEGFA-206ENST00000372077 TFR2Q9UP52 801 aa20.18■□□□□ 0.82
VEGFA-206ENST00000372077 CALUO43852 315 aaPredicted RBP20.17■□□□□ 0.82
VEGFA-206ENST00000372077 CAPSQ13938 189 aa20.17■□□□□ 0.82
VEGFA-206ENST00000372077 SETD4Q9NVD3 440 aa20.17■□□□□ 0.82
VEGFA-206ENST00000372077 PUF60Q9UHX1 559 aaKnown RBP20.17■□□□□ 0.82
VEGFA-206ENST00000372077 TBX20Q9UMR3 447 aa20.17■□□□□ 0.82
VEGFA-206ENST00000372077 FGFR1OPO95684 399 aaKnown RBP20.17■□□□□ 0.82
VEGFA-206ENST00000372077 DNM2P50570 870 aa20.17■□□□□ 0.82
VEGFA-206ENST00000372077 ADAM17P78536 824 aa20.17■□□□□ 0.82
VEGFA-206ENST00000372077 SPAG1Q07617 926 aa20.17■□□□□ 0.82
VEGFA-206ENST00000372077 APTXQ7Z2E3 356 aaKnown RBP20.17■□□□□ 0.82
VEGFA-206ENST00000372077 UBXN4Q92575 508 aa20.17■□□□□ 0.82
VEGFA-206ENST00000372077 VPS16Q9H269 839 aa20.17■□□□□ 0.82
VEGFA-206ENST00000372077 DENND3A2RUS2 1198 aa20.17■□□□□ 0.82
VEGFA-206ENST00000372077 LRRC10BA6NIK2 292 aa20.17■□□□□ 0.82
VEGFA-206ENST00000372077 ASAP2O43150 1006 aa20.17■□□□□ 0.82
VEGFA-206ENST00000372077 CLCN3P51790 818 aa20.17■□□□□ 0.82
VEGFA-206ENST00000372077 GYS2P54840 703 aa20.17■□□□□ 0.82
VEGFA-206ENST00000372077 LAMTOR4Q0VGL1 99 aa20.17■□□□□ 0.82
VEGFA-206ENST00000372077 MAP4K3Q8IVH8 894 aa20.17■□□□□ 0.82
VEGFA-206ENST00000372077 TC2NQ8N9U0 490 aa20.17■□□□□ 0.82
VEGFA-206ENST00000372077 LMBR1Q8WVP7 490 aa20.17■□□□□ 0.82
VEGFA-206ENST00000372077 GBP3Q9H0R5 595 aa20.17■□□□□ 0.82
VEGFA-206ENST00000372077 RNF216Q9NWF9 866 aaPredicted RBP20.17■□□□□ 0.82
VEGFA-206ENST00000372077 LIMA1Q9UHB6 759 aaKnown RBP20.17■□□□□ 0.82
VEGFA-206ENST00000372077 HOXC8P31273 242 aa20.16■□□□□ 0.82
VEGFA-206ENST00000372077 TCP11X2Q5H9J9 407 aa20.16■□□□□ 0.82
VEGFA-206ENST00000372077 LHX8Q68G74 356 aa20.16■□□□□ 0.82
VEGFA-206ENST00000372077 TAS1R3Q7RTX0 852 aa20.16■□□□□ 0.82
VEGFA-206ENST00000372077 METTL13Q8N6R0 699 aa20.16■□□□□ 0.82
VEGFA-206ENST00000372077 CEP63Q96MT8 703 aa20.16■□□□□ 0.82
VEGFA-206ENST00000372077 IKZF4Q9H2S9 585 aa20.16■□□□□ 0.82
VEGFA-206ENST00000372077 MBLAC1A4D2B0 266 aaPredicted RBP20.16■□□□□ 0.82
VEGFA-206ENST00000372077 TMEM139Q8IV31 216 aa20.16■□□□□ 0.82
VEGFA-206ENST00000372077 PCNTO95613 3336 aa20.15■□□□□ 0.82
VEGFA-206ENST00000372077 KCNJ18B7U540 433 aa20.15■□□□□ 0.82
VEGFA-206ENST00000372077 EEF1GP26641 437 aaKnown RBP20.15■□□□□ 0.82
VEGFA-206ENST00000372077 SNRPFP62306 86 aaKnown RBP20.15■□□□□ 0.82
VEGFA-206ENST00000372077 RBL2Q08999 1139 aa20.15■□□□□ 0.82
VEGFA-206ENST00000372077 KCNJ12Q14500 433 aa20.15■□□□□ 0.82
VEGFA-206ENST00000372077 KCNA10Q16322 511 aa20.15■□□□□ 0.82
VEGFA-206ENST00000372077 CXCL17Q6UXB2 119 aa20.15■□□□□ 0.82
VEGFA-206ENST00000372077 FAM114A1Q8IWE2 563 aa20.15■□□□□ 0.82
VEGFA-206ENST00000372077 DEPTORQ8TB45 409 aa20.15■□□□□ 0.82
VEGFA-206ENST00000372077 GOLGA5Q8TBA6 731 aa20.15■□□□□ 0.82
VEGFA-206ENST00000372077 TMEM174Q8WUU8 243 aa20.15■□□□□ 0.82
VEGFA-206ENST00000372077 HINFPQ9BQA5 517 aa20.15■□□□□ 0.82
VEGFA-206ENST00000372077 TMEM134Q9H6X4 195 aa20.15■□□□□ 0.82
VEGFA-206ENST00000372077 SCN10AQ9Y5Y9 1956 aa20.15■□□□□ 0.82
VEGFA-206ENST00000372077 LRRIQ4A6NIV6 560 aa20.15■□□□□ 0.82
VEGFA-206ENST00000372077 CBFA2T2O43439 604 aa20.15■□□□□ 0.82
VEGFA-206ENST00000372077 TMOD1P28289 359 aa20.15■□□□□ 0.82
VEGFA-206ENST00000372077 HIC1Q14526 733 aa20.15■□□□□ 0.82
VEGFA-206ENST00000372077 CDCA2Q69YH5 1023 aaPredicted RBP20.15■□□□□ 0.82
VEGFA-206ENST00000372077 PCSK9Q8NBP7 692 aaKnown RBP20.15■□□□□ 0.82
VEGFA-206ENST00000372077 SH3TC2Q8TF17 1288 aa20.15■□□□□ 0.82
VEGFA-206ENST00000372077 EXOC7Q9UPT5 735 aa20.15■□□□□ 0.82
VEGFA-206ENST00000372077 KAT6AQ92794 2004 aa20.14■□□□□ 0.82
VEGFA-206ENST00000372077 ASGR1P07306 291 aa20.14■□□□□ 0.82
VEGFA-206ENST00000372077 POU5F1BQ06416 359 aa20.14■□□□□ 0.82
VEGFA-206ENST00000372077 ADAM9Q13443 819 aa20.14■□□□□ 0.82
VEGFA-206ENST00000372077 NFRKBQ6P4R8 1299 aa20.14■□□□□ 0.82
VEGFA-206ENST00000372077 HS2ST1Q7LGA3 356 aa20.14■□□□□ 0.82
VEGFA-206ENST00000372077 SYCP3Q8IZU3 236 aa20.14■□□□□ 0.82
VEGFA-206ENST00000372077 AGPAT3Q9NRZ7 376 aa20.14■□□□□ 0.82
VEGFA-206ENST00000372077 SIP14410 1827 aa20.14■□□□□ 0.81
VEGFA-206ENST00000372077 EVPLQ92817 2033 aa20.14■□□□□ 0.81
VEGFA-206ENST00000372077 SPECC1LQ69YQ0 1117 aa20.14■□□□□ 0.81
VEGFA-206ENST00000372077 RNF180Q86T96 592 aa20.14■□□□□ 0.81
VEGFA-206ENST00000372077 RHPN2Q8IUC4 686 aa20.14■□□□□ 0.81
VEGFA-206ENST00000372077 DMAC2Q9NW81 257 aa20.14■□□□□ 0.81
VEGFA-206ENST00000372077 HDAC6Q9UBN7 1215 aa20.14■□□□□ 0.81
VEGFA-206ENST00000372077 NR3C1P04150 777 aa20.13■□□□□ 0.81
VEGFA-206ENST00000372077 NR2F2P24468 414 aa20.13■□□□□ 0.81
VEGFA-206ENST00000372077 CHMP4BP1P59074 171 aa20.13■□□□□ 0.81
VEGFA-206ENST00000372077 MYBPC2Q14324 1141 aa20.13■□□□□ 0.81
VEGFA-206ENST00000372077 KRT31Q15323 416 aa20.13■□□□□ 0.81
VEGFA-206ENST00000372077 SLC9A9Q8IVB4 645 aa20.13■□□□□ 0.81
VEGFA-206ENST00000372077 C12orf56Q8IXR9 622 aa20.13■□□□□ 0.81
VEGFA-206ENST00000372077 CNOT6LQ96LI5 555 aaKnown RBP20.13■□□□□ 0.81
VEGFA-206ENST00000372077 MAGEC2Q9UBF1 373 aaPredicted RBP20.13■□□□□ 0.81
VEGFA-206ENST00000372077 RNF225M0QZC1 329 aaPredicted RBP20.13■□□□□ 0.81
VEGFA-206ENST00000372077 CETN3O15182 167 aa20.13■□□□□ 0.81
VEGFA-206ENST00000372077 RPL13P26373 211 aaKnown RBP20.13■□□□□ 0.81
VEGFA-206ENST00000372077 CASQ1P31415 396 aa20.13■□□□□ 0.81
VEGFA-206ENST00000372077 TFDP1Q14186 410 aa20.13■□□□□ 0.81
VEGFA-206ENST00000372077 KIAA0319LQ8IZA0 1049 aa20.13■□□□□ 0.81
VEGFA-206ENST00000372077 KRT222Q8N1A0 295 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms