RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 SPATA4Q8NEY3 305 aa16.15■□□□□ 0.18
COL5A1-201ENST00000371817 MPP4Q96JB8 637 aa16.15■□□□□ 0.18
COL5A1-201ENST00000371817 OLFM1Q99784 485 aa16.15■□□□□ 0.18
COL5A1-201ENST00000371817 ARIH2O95376 493 aa16.15■□□□□ 0.18
COL5A1-201ENST00000371817 SERPINB8P50452 374 aa16.15■□□□□ 0.18
COL5A1-201ENST00000371817 AQRO60306 1485 aaKnown RBP eCLIP16.15■□□□□ 0.18
COL5A1-201ENST00000371817 P3H2Q8IVL5 708 aa16.15■□□□□ 0.18
COL5A1-201ENST00000371817 TEKT3Q9BXF9 490 aa16.15■□□□□ 0.18
COL5A1-201ENST00000371817 HDAC6Q9UBN7 1215 aa16.15■□□□□ 0.18
COL5A1-201ENST00000371817 PNMA6EA0A0J9YXQ4 647 aa16.15■□□□□ 0.18
COL5A1-201ENST00000371817 DDAH1O94760 285 aa16.15■□□□□ 0.18
COL5A1-201ENST00000371817 ATP5JP18859 108 aa16.15■□□□□ 0.18
COL5A1-201ENST00000371817 IRAK1P51617 712 aa16.15■□□□□ 0.18
COL5A1-201ENST00000371817 AGBL2Q5U5Z8 902 aa16.15■□□□□ 0.18
COL5A1-201ENST00000371817 SPATA5Q8NB90 893 aa16.15■□□□□ 0.18
COL5A1-201ENST00000371817 AGR3Q8TD06 166 aa16.15■□□□□ 0.18
COL5A1-201ENST00000371817 TRABDQ9H4I3 376 aa16.15■□□□□ 0.18
COL5A1-201ENST00000371817 OSBPL10Q9BXB5 764 aa16.15■□□□□ 0.18
COL5A1-201ENST00000371817 VCPKMTQ9H867 229 aa16.15■□□□□ 0.18
COL5A1-201ENST00000371817 FGFR4P22455 802 aa16.15■□□□□ 0.18
COL5A1-201ENST00000371817 CPXCR1Q8N123 301 aa16.15■□□□□ 0.18
COL5A1-201ENST00000371817 CEP44Q9C0F1 390 aa16.15■□□□□ 0.18
COL5A1-201ENST00000371817 DCLRE1BQ9H816 532 aa16.15■□□□□ 0.18
COL5A1-201ENST00000371817 HERC5Q9UII4 1024 aaKnown RBP16.15■□□□□ 0.18
COL5A1-201ENST00000371817 RCOR1Q9UKL0 485 aa16.15■□□□□ 0.18
COL5A1-201ENST00000371817 HPCAL4Q9UM19 191 aa16.15■□□□□ 0.18
COL5A1-201ENST00000371817 ZBED4O75132 1171 aa16.14■□□□□ 0.17
COL5A1-201ENST00000371817 NCAPHQ15003 741 aa16.14■□□□□ 0.17
COL5A1-201ENST00000371817 SH2D3CQ8N5H7 860 aa16.14■□□□□ 0.17
COL5A1-201ENST00000371817 ZWILCHQ9H900 591 aa16.14■□□□□ 0.17
COL5A1-201ENST00000371817 DAPK2Q9UIK4 370 aa16.14■□□□□ 0.17
COL5A1-201ENST00000371817 PCDHGB4Q9UN71 923 aa16.14■□□□□ 0.17
COL5A1-201ENST00000371817 MYO1DO94832 1006 aa16.14■□□□□ 0.17
COL5A1-201ENST00000371817 GUCA1CO95843 209 aa16.14■□□□□ 0.17
COL5A1-201ENST00000371817 HMOX2P30519 316 aa16.14■□□□□ 0.17
COL5A1-201ENST00000371817 ADARP55265 1226 aaKnown RBP16.14■□□□□ 0.17
COL5A1-201ENST00000371817 LBRQ14739 615 aaKnown RBP16.14■□□□□ 0.17
COL5A1-201ENST00000371817 DIS3LQ8TF46 1054 aaKnown RBP16.14■□□□□ 0.17
COL5A1-201ENST00000371817 LRRC59Q96AG4 307 aaKnown RBP16.14■□□□□ 0.17
COL5A1-201ENST00000371817 EYA3Q99504 573 aa16.14■□□□□ 0.17
COL5A1-201ENST00000371817 GPBP1L1Q9HC44 474 aaPredicted RBP16.14■□□□□ 0.17
COL5A1-201ENST00000371817 KLHL8Q9P2G9 620 aaPredicted RBP16.14■□□□□ 0.17
COL5A1-201ENST00000371817 FAM45BPQ6NSW5 357 aa16.14■□□□□ 0.17
COL5A1-201ENST00000371817 GRAMD1CQ8IYS0 662 aa16.14■□□□□ 0.17
COL5A1-201ENST00000371817 NSL1Q96IY1 281 aa16.14■□□□□ 0.17
COL5A1-201ENST00000371817 OSBPL8Q9BZF1 889 aa16.14■□□□□ 0.17
COL5A1-201ENST00000371817 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.14■□□□□ 0.17
COL5A1-201ENST00000371817 TESPA1A2RU30 521 aaPredicted RBP16.14■□□□□ 0.17
COL5A1-201ENST00000371817 CDH16O75309 829 aa16.14■□□□□ 0.17
COL5A1-201ENST00000371817 USP1O94782 785 aa16.14■□□□□ 0.17
COL5A1-201ENST00000371817 VSNL1P62760 191 aa16.14■□□□□ 0.17
COL5A1-201ENST00000371817 PTH1RQ03431 593 aa16.14■□□□□ 0.17
COL5A1-201ENST00000371817 KRT33BQ14525 404 aa16.14■□□□□ 0.17
COL5A1-201ENST00000371817 ZNF710Q8N1W2 664 aa16.14■□□□□ 0.17
COL5A1-201ENST00000371817 FAM192AQ9GZU8 254 aa16.14■□□□□ 0.17
COL5A1-201ENST00000371817 CEP72Q9P209 647 aa16.14■□□□□ 0.17
COL5A1-201ENST00000371817 MAST3O60307 1309 aa16.14■□□□□ 0.17
COL5A1-201ENST00000371817 SYNDIG1LA6NDD5 238 aa16.14■□□□□ 0.17
COL5A1-201ENST00000371817 PPIP5K2O43314 1243 aa16.14■□□□□ 0.17
COL5A1-201ENST00000371817 TYK2P29597 1187 aa16.14■□□□□ 0.17
COL5A1-201ENST00000371817 FASTKD1Q53R41 847 aaKnown RBP16.14■□□□□ 0.17
COL5A1-201ENST00000371817 ATP8B4Q8TF62 1192 aa16.14■□□□□ 0.17
COL5A1-201ENST00000371817 MYO1GB0I1T2 1018 aa16.14■□□□□ 0.17
COL5A1-201ENST00000371817 PDIA2Q13087 525 aaKnown RBP16.14■□□□□ 0.17
COL5A1-201ENST00000371817 ARMC4Q5T2S8 1044 aa16.14■□□□□ 0.17
COL5A1-201ENST00000371817 LINC00301Q8NCQ3 95 aa16.14■□□□□ 0.17
COL5A1-201ENST00000371817 MTA3Q9BTC8 594 aa16.14■□□□□ 0.17
COL5A1-201ENST00000371817 KLHL4Q9C0H6 718 aa16.14■□□□□ 0.17
COL5A1-201ENST00000371817 WNT8AQ9H1J5 351 aa16.14■□□□□ 0.17
COL5A1-201ENST00000371817 PALD1Q9ULE6 856 aa16.14■□□□□ 0.17
COL5A1-201ENST00000371817 ZNF18P17022 549 aa16.13■□□□□ 0.17
COL5A1-201ENST00000371817 PAX7P23759 505 aa16.13■□□□□ 0.17
COL5A1-201ENST00000371817 KYNUQ16719 465 aa16.13■□□□□ 0.17
COL5A1-201ENST00000371817 CALML6Q8TD86 181 aa16.13■□□□□ 0.17
COL5A1-201ENST00000371817 TBC1D22AQ8WUA7 517 aa16.13■□□□□ 0.17
COL5A1-201ENST00000371817 DEPDC7Q96QD5 511 aa16.13■□□□□ 0.17
COL5A1-201ENST00000371817 CROCCQ5TZA2 2017 aa16.13■□□□□ 0.17
COL5A1-201ENST00000371817 ACCSQ96QU6 501 aa16.13■□□□□ 0.17
COL5A1-201ENST00000371817 CFAP99D6REC4 459 aa16.13■□□□□ 0.17
COL5A1-201ENST00000371817 RGS20O76081 388 aa16.13■□□□□ 0.17
COL5A1-201ENST00000371817 R3HDM1Q15032 1099 aaKnown RBP16.13■□□□□ 0.17
COL5A1-201ENST00000371817 RSBN1Q5VWQ0 802 aaPredicted RBP16.13■□□□□ 0.17
COL5A1-201ENST00000371817 CCDC60Q8IWA6 550 aaPredicted RBP16.13■□□□□ 0.17
COL5A1-201ENST00000371817 KIRREL3Q8IZU9 778 aa16.13■□□□□ 0.17
COL5A1-201ENST00000371817 C3orf20Q8ND61 904 aa16.13■□□□□ 0.17
COL5A1-201ENST00000371817 FHDC1Q9C0D6 1143 aaPredicted RBP16.13■□□□□ 0.17
COL5A1-201ENST00000371817 FAM25AB3EWG3 89 aa16.13■□□□□ 0.17
COL5A1-201ENST00000371817 FAM25CB3EWG5 89 aa16.13■□□□□ 0.17
COL5A1-201ENST00000371817 FAM25GB3EWG6 89 aa16.13■□□□□ 0.17
COL5A1-201ENST00000371817 PSMA4P25789 261 aaKnown RBP16.13■□□□□ 0.17
COL5A1-201ENST00000371817 GFPT1Q06210 699 aaPredicted RBP16.13■□□□□ 0.17
COL5A1-201ENST00000371817 NAALADL2Q58DX5 795 aa16.13■□□□□ 0.17
COL5A1-201ENST00000371817 RMDN1Q96DB5 314 aa16.13■□□□□ 0.17
COL5A1-201ENST00000371817 METTL22Q9BUU2 404 aaPredicted RBP16.13■□□□□ 0.17
COL5A1-201ENST00000371817 EPC1Q9H2F5 836 aa16.13■□□□□ 0.17
COL5A1-201ENST00000371817 DMRT2Q9Y5R5 561 aa16.13■□□□□ 0.17
COL5A1-201ENST00000371817 KLHL17Q6TDP4 642 aa16.13■□□□□ 0.17
COL5A1-201ENST00000371817 PASD1Q8IV76 773 aa16.13■□□□□ 0.17
COL5A1-201ENST00000371817 IMPAD1Q9NX62 359 aa16.13■□□□□ 0.17
COL5A1-201ENST00000371817 CYTH3O43739 400 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms