RNA–Protein interactions for RNA: ENST00000370848.8

SS18L1-202, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best) BASIC

Gene SS18L1, Length 1,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-202ENST00000370848 S1PR5Q9H228 398 aa16.86■□□□□ 0.29
SS18L1-202ENST00000370848 NGRNQ9NPE2 291 aaKnown RBP16.86■□□□□ 0.29
SS18L1-202ENST00000370848 ANKEF1Q9NU02 776 aa16.86■□□□□ 0.29
SS18L1-202ENST00000370848 BARX2Q9UMQ3 279 aaPredicted RBP16.86■□□□□ 0.29
SS18L1-202ENST00000370848 A0A087WZ62 844 aa16.85■□□□□ 0.29
SS18L1-202ENST00000370848 CARNS1A5YM72 827 aa16.85■□□□□ 0.29
SS18L1-202ENST00000370848 USO1O60763 962 aaKnown RBP16.85■□□□□ 0.29
SS18L1-202ENST00000370848 ZSCAN20P17040 1043 aaPredicted RBP16.85■□□□□ 0.29
SS18L1-202ENST00000370848 RFC5P40937 340 aa16.85■□□□□ 0.29
SS18L1-202ENST00000370848 PDIA5Q14554 519 aa16.85■□□□□ 0.29
SS18L1-202ENST00000370848 HAUS3Q68CZ6 603 aa16.85■□□□□ 0.29
SS18L1-202ENST00000370848 ZNF410Q86VK4 478 aa16.85■□□□□ 0.29
SS18L1-202ENST00000370848 RHPN2Q8IUC4 686 aa16.85■□□□□ 0.29
SS18L1-202ENST00000370848 THNSL1Q8IYQ7 743 aa16.85■□□□□ 0.29
SS18L1-202ENST00000370848 NLRP7Q8WX94 980 aa16.85■□□□□ 0.29
SS18L1-202ENST00000370848 SLC7A3Q8WY07 619 aa16.85■□□□□ 0.29
SS18L1-202ENST00000370848 NLRP4Q96MN2 994 aa16.85■□□□□ 0.29
SS18L1-202ENST00000370848 SCLT1Q96NL6 688 aa16.85■□□□□ 0.29
SS18L1-202ENST00000370848 FDXACB1Q9BRP7 624 aaPredicted RBP16.85■□□□□ 0.29
SS18L1-202ENST00000370848 DACT1Q9NYF0 836 aa16.85■□□□□ 0.29
SS18L1-202ENST00000370848 MUTYHQ9UIF7 546 aa16.85■□□□□ 0.29
SS18L1-202ENST00000370848 PPME1Q9Y570 386 aa16.85■□□□□ 0.29
SS18L1-202ENST00000370848 IBSPP21815 317 aaPredicted RBP16.84■□□□□ 0.29
SS18L1-202ENST00000370848 CEBPZQ03701 1054 aaKnown RBP16.84■□□□□ 0.29
SS18L1-202ENST00000370848 PTPAQ15257 358 aa16.84■□□□□ 0.29
SS18L1-202ENST00000370848 HFE2Q6ZVN8 426 aa16.84■□□□□ 0.29
SS18L1-202ENST00000370848 RBM23Q86U06 439 aaKnown RBP16.84■□□□□ 0.29
SS18L1-202ENST00000370848 SLC39A11Q8N1S5 342 aa16.84■□□□□ 0.29
SS18L1-202ENST00000370848 PRPF31Q8WWY3 499 aaKnown RBP16.84■□□□□ 0.29
SS18L1-202ENST00000370848 CCDC43Q96MW1 224 aaKnown RBP16.84■□□□□ 0.29
SS18L1-202ENST00000370848 ZNF558Q96NG5 402 aa16.84■□□□□ 0.29
SS18L1-202ENST00000370848 MTRQ99707 1265 aa16.84■□□□□ 0.29
SS18L1-202ENST00000370848 MRPL9Q9BYD2 267 aaKnown RBP16.84■□□□□ 0.29
SS18L1-202ENST00000370848 GPRC5CQ9NQ84 441 aa16.84■□□□□ 0.29
SS18L1-202ENST00000370848 DDX19AQ9NUU7 478 aaKnown RBP16.84■□□□□ 0.29
SS18L1-202ENST00000370848 PUF60Q9UHX1 559 aaKnown RBP16.84■□□□□ 0.29
SS18L1-202ENST00000370848 KIAA1024Q9UPX6 916 aa16.84■□□□□ 0.29
SS18L1-202ENST00000370848 IRAK3Q9Y616 596 aa16.84■□□□□ 0.29
SS18L1-202ENST00000370848 ZNF623O75123 536 aa16.83■□□□□ 0.28
SS18L1-202ENST00000370848 HOXB8P17481 243 aaPredicted RBP16.83■□□□□ 0.28
SS18L1-202ENST00000370848 DNM2P50570 870 aa16.83■□□□□ 0.28
SS18L1-202ENST00000370848 ZRSR1Q15695 479 aaKnown RBP16.83■□□□□ 0.28
SS18L1-202ENST00000370848 SPOUT1Q5T280 376 aaKnown RBP16.83■□□□□ 0.28
SS18L1-202ENST00000370848 MAEAQ7L5Y9 396 aa16.83■□□□□ 0.28
SS18L1-202ENST00000370848 KCNK18Q7Z418 384 aa16.83■□□□□ 0.28
SS18L1-202ENST00000370848 ASAP3Q8TDY4 903 aa16.83■□□□□ 0.28
SS18L1-202ENST00000370848 PNMA5Q96PV4 448 aa16.83■□□□□ 0.28
SS18L1-202ENST00000370848 NACC1Q96RE7 527 aa16.83■□□□□ 0.28
SS18L1-202ENST00000370848 USP28Q96RU2 1077 aa16.83■□□□□ 0.28
SS18L1-202ENST00000370848 PLIN2Q99541 437 aa16.83■□□□□ 0.28
SS18L1-202ENST00000370848 TCF25Q9BQ70 676 aa16.83■□□□□ 0.28
SS18L1-202ENST00000370848 JPH2Q9BR39 696 aaPredicted RBP16.83■□□□□ 0.28
SS18L1-202ENST00000370848 RAB34Q9BZG1 259 aa16.83■□□□□ 0.28
SS18L1-202ENST00000370848 SPG21Q9NZD8 308 aa16.83■□□□□ 0.28
SS18L1-202ENST00000370848 COL4A3BPQ9Y5P4 624 aa16.83■□□□□ 0.28
SS18L1-202ENST00000370848 ARID2Q68CP9 1835 aa16.82■□□□□ 0.28
SS18L1-202ENST00000370848 E9PMD0 336 aa16.82■□□□□ 0.28
SS18L1-202ENST00000370848 PER2O15055 1255 aa16.82■□□□□ 0.28
SS18L1-202ENST00000370848 DGAT1O75907 488 aa16.82■□□□□ 0.28
SS18L1-202ENST00000370848 CSPG5O95196 566 aa16.82■□□□□ 0.28
SS18L1-202ENST00000370848 SRGAP2BP0DMP2 458 aa16.82■□□□□ 0.28
SS18L1-202ENST00000370848 MARCKSP29966 332 aaPredicted RBP16.82■□□□□ 0.28
SS18L1-202ENST00000370848 PHKA2P46019 1235 aa16.82■□□□□ 0.28
SS18L1-202ENST00000370848 RBM10P98175 930 aaKnown RBP16.82■□□□□ 0.28
SS18L1-202ENST00000370848 LAMTOR4Q0VGL1 99 aa16.82■□□□□ 0.28
SS18L1-202ENST00000370848 FOXD4L6Q3SYB3 417 aaPredicted RBP16.82■□□□□ 0.28
SS18L1-202ENST00000370848 KRT79Q5XKE5 535 aa16.82■□□□□ 0.28
SS18L1-202ENST00000370848 ARL6IP4Q66PJ3 421 aaKnown RBP16.82■□□□□ 0.28
SS18L1-202ENST00000370848 ANKRD54Q6NXT1 300 aa16.82■□□□□ 0.28
SS18L1-202ENST00000370848 SYCE2Q6PIF2 218 aa16.82■□□□□ 0.28
SS18L1-202ENST00000370848 FOXD4L3Q6VB84 417 aaPredicted RBP16.82■□□□□ 0.28
SS18L1-202ENST00000370848 ABI1Q8IZP0 508 aa16.82■□□□□ 0.28
SS18L1-202ENST00000370848 PSPC1Q8WXF1 523 aaKnown RBP16.82■□□□□ 0.28
SS18L1-202ENST00000370848 GCOM2Q9BZD3 368 aaPredicted RBP16.82■□□□□ 0.28
SS18L1-202ENST00000370848 INO80BQ9C086 356 aaPredicted RBP16.82■□□□□ 0.28
SS18L1-202ENST00000370848 POLD4Q9HCU8 107 aa16.82■□□□□ 0.28
SS18L1-202ENST00000370848 DBR1Q9UK59 544 aaKnown RBP16.82■□□□□ 0.28
SS18L1-202ENST00000370848 KMT2EQ8IZD2 1858 aa16.82■□□□□ 0.28
SS18L1-202ENST00000370848 HIDE1A8MVS5 230 aa16.81■□□□□ 0.28
SS18L1-202ENST00000370848 SRGAP2CP0DJJ0 459 aa16.81■□□□□ 0.28
SS18L1-202ENST00000370848 SKIP12755 728 aa16.81■□□□□ 0.28
SS18L1-202ENST00000370848 XRCC6P12956 609 aaKnown RBP eCLIP16.81■□□□□ 0.28
SS18L1-202ENST00000370848 SFPQP23246 707 aaKnown RBP eCLIP16.81■□□□□ 0.28
SS18L1-202ENST00000370848 KRT17Q04695 432 aa16.81■□□□□ 0.28
SS18L1-202ENST00000370848 PADI6Q6TGC4 694 aa16.81■□□□□ 0.28
SS18L1-202ENST00000370848 TRIM67Q6ZTA4 783 aa16.81■□□□□ 0.28
SS18L1-202ENST00000370848 MRPL43Q8N983 215 aaKnown RBP16.81■□□□□ 0.28
SS18L1-202ENST00000370848 MICAL1Q8TDZ2 1067 aa16.81■□□□□ 0.28
SS18L1-202ENST00000370848 LRRC15Q8TF66 581 aa16.81■□□□□ 0.28
SS18L1-202ENST00000370848 MFSD14AQ96MC6 490 aa16.81■□□□□ 0.28
SS18L1-202ENST00000370848 POLR3FQ9H1D9 316 aaPredicted RBP16.81■□□□□ 0.28
SS18L1-202ENST00000370848 BHMT2Q9H2M3 363 aa16.81■□□□□ 0.28
SS18L1-202ENST00000370848 ZSCAN16Q9H4T2 348 aaPredicted RBP16.81■□□□□ 0.28
SS18L1-202ENST00000370848 MINDY3Q9H8M7 445 aa16.81■□□□□ 0.28
SS18L1-202ENST00000370848 IFT122Q9HBG6 1241 aa16.81■□□□□ 0.28
SS18L1-202ENST00000370848 ARHGEF35A5YM69 484 aa16.8■□□□□ 0.28
SS18L1-202ENST00000370848 C2orf71A6NGG8 1288 aa16.8■□□□□ 0.28
SS18L1-202ENST00000370848 BMP15O95972 392 aa16.8■□□□□ 0.28
SS18L1-202ENST00000370848 F13A1P00488 732 aa16.8■□□□□ 0.28
SS18L1-202ENST00000370848 ZSCAN22P10073 491 aaPredicted RBP16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms