RNA–Protein interactions for RNA: ENST00000369089.3

PRDM1-201, Transcript of PR/SET domain 1, humanhuman

TSL 1 (best) BASIC

Gene PRDM1, Length 4,675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-201ENST00000369089 TEX28O15482 410 aa11.08□□□□□ -0.64
PRDM1-201ENST00000369089 KRT20P35900 424 aa11.08□□□□□ -0.64
PRDM1-201ENST00000369089 NONOQ15233 471 aaKnown RBP eCLIP11.08□□□□□ -0.64
PRDM1-201ENST00000369089 TMTC4Q5T4D3 741 aa11.08□□□□□ -0.64
PRDM1-201ENST00000369089 ADSSL1Q8N142 457 aa11.08□□□□□ -0.64
PRDM1-201ENST00000369089 CEP44Q9C0F1 390 aa11.08□□□□□ -0.64
PRDM1-201ENST00000369089 NDST4Q9H3R1 872 aa11.08□□□□□ -0.64
PRDM1-201ENST00000369089 NOL6Q9H6R4 1146 aaKnown RBP11.08□□□□□ -0.64
PRDM1-201ENST00000369089 AK5Q9Y6K8 562 aa11.08□□□□□ -0.64
PRDM1-201ENST00000369089 GRIN2DO15399 1336 aa11.08□□□□□ -0.64
PRDM1-201ENST00000369089 TMEM120BA0PK00 339 aa11.08□□□□□ -0.64
PRDM1-201ENST00000369089 SPTLC1O15269 473 aa11.08□□□□□ -0.64
PRDM1-201ENST00000369089 FKBP6O75344 327 aa11.08□□□□□ -0.64
PRDM1-201ENST00000369089 MFN2O95140 757 aa11.08□□□□□ -0.64
PRDM1-201ENST00000369089 ENO2P09104 434 aaPredicted RBP11.08□□□□□ -0.64
PRDM1-201ENST00000369089 POLGP54098 1239 aaPredicted RBP11.08□□□□□ -0.64
PRDM1-201ENST00000369089 LPIN2Q92539 896 aa11.08□□□□□ -0.64
PRDM1-201ENST00000369089 SUCLG2Q96I99 432 aa11.08□□□□□ -0.64
PRDM1-201ENST00000369089 DDX47Q9H0S4 455 aaKnown RBP11.08□□□□□ -0.64
PRDM1-201ENST00000369089 C12orf4Q9NQ89 552 aa11.08□□□□□ -0.64
PRDM1-201ENST00000369089 PCMTD2Q9NV79 361 aa11.08□□□□□ -0.64
PRDM1-201ENST00000369089 IGSF1Q8N6C5 1336 aa11.07□□□□□ -0.64
PRDM1-201ENST00000369089 MAP3K4Q9Y6R4 1608 aa11.07□□□□□ -0.64
PRDM1-201ENST00000369089 PFDN6O15212 129 aa11.07□□□□□ -0.64
PRDM1-201ENST00000369089 GTPBP6O43824 516 aaPredicted RBP11.07□□□□□ -0.64
PRDM1-201ENST00000369089 BAIAP3O94812 1187 aa11.07□□□□□ -0.64
PRDM1-201ENST00000369089 ASLP04424 464 aa11.07□□□□□ -0.64
PRDM1-201ENST00000369089 LDHBP07195 334 aaKnown RBP11.07□□□□□ -0.64
PRDM1-201ENST00000369089 TNFAIP3P21580 790 aa11.07□□□□□ -0.64
PRDM1-201ENST00000369089 OLR1P78380 273 aa11.07□□□□□ -0.64
PRDM1-201ENST00000369089 ADAM17P78536 824 aa11.07□□□□□ -0.64
PRDM1-201ENST00000369089 SPIDRQ14159 915 aa11.07□□□□□ -0.64
PRDM1-201ENST00000369089 GCKRQ14397 625 aa11.07□□□□□ -0.64
PRDM1-201ENST00000369089 AIPL1Q9NZN9 384 aa11.07□□□□□ -0.64
PRDM1-201ENST00000369089 STRIP2Q9ULQ0 834 aa11.07□□□□□ -0.64
PRDM1-201ENST00000369089 TMEM98Q9Y2Y6 226 aa11.07□□□□□ -0.64
PRDM1-201ENST00000369089 BCORL1Q5H9F3 1711 aa11.07□□□□□ -0.64
PRDM1-201ENST00000369089 CCDC162PA2VCL2 907 aa11.07□□□□□ -0.64
PRDM1-201ENST00000369089 HNRNPCL2B2RXH8 293 aa11.07□□□□□ -0.64
PRDM1-201ENST00000369089 MTRF1O75570 445 aaKnown RBP11.07□□□□□ -0.64
PRDM1-201ENST00000369089 LYNP07948 512 aa11.07□□□□□ -0.64
PRDM1-201ENST00000369089 JAK1P23458 1154 aa11.07□□□□□ -0.64
PRDM1-201ENST00000369089 FXR1P51114 621 aaKnown RBP eCLIP11.07□□□□□ -0.64
PRDM1-201ENST00000369089 BPIFB4P59827 614 aa11.07□□□□□ -0.64
PRDM1-201ENST00000369089 HAUS3Q68CZ6 603 aa11.07□□□□□ -0.64
PRDM1-201ENST00000369089 GATAD2AQ86YP4 633 aa11.07□□□□□ -0.64
PRDM1-201ENST00000369089 CCDC103Q8IW40 242 aa11.07□□□□□ -0.64
PRDM1-201ENST00000369089 L3MBTL3Q96JM7 780 aaPredicted RBP11.07□□□□□ -0.64
PRDM1-201ENST00000369089 STK33Q9BYT3 514 aa11.07□□□□□ -0.64
PRDM1-201ENST00000369089 TRPM1Q7Z4N2 1603 aa11.07□□□□□ -0.64
PRDM1-201ENST00000369089 TTC26A0AVF1 554 aa11.07□□□□□ -0.64
PRDM1-201ENST00000369089 A6NHS1 94 aa11.07□□□□□ -0.64
PRDM1-201ENST00000369089 EYA2O00167 538 aa11.07□□□□□ -0.64
PRDM1-201ENST00000369089 TRAF5O00463 557 aa11.07□□□□□ -0.64
PRDM1-201ENST00000369089 UNC5CO95185 931 aa11.07□□□□□ -0.64
PRDM1-201ENST00000369089 SKIV2L2P42285 1042 aaKnown RBP11.07□□□□□ -0.64
PRDM1-201ENST00000369089 GEN1Q17RS7 908 aa11.07□□□□□ -0.64
PRDM1-201ENST00000369089 AFAP1L2Q8N4X5 818 aa11.07□□□□□ -0.64
PRDM1-201ENST00000369089 TTC39CQ8N584 583 aa11.07□□□□□ -0.64
PRDM1-201ENST00000369089 CASKIN2Q8WXE0 1202 aa11.07□□□□□ -0.64
PRDM1-201ENST00000369089 CNBD2Q96M20 576 aa11.07□□□□□ -0.64
PRDM1-201ENST00000369089 CHP1Q99653 195 aa11.07□□□□□ -0.64
PRDM1-201ENST00000369089 KIFC3Q9BVG8 833 aa11.07□□□□□ -0.64
PRDM1-201ENST00000369089 IMPG2Q9BZV3 1241 aa11.07□□□□□ -0.64
PRDM1-201ENST00000369089 MARCH7Q9H992 704 aa11.07□□□□□ -0.64
PRDM1-201ENST00000369089 FAM153AQ9UHL3 310 aa11.07□□□□□ -0.64
PRDM1-201ENST00000369089 DMTF1Q9Y222 760 aa11.07□□□□□ -0.64
PRDM1-201ENST00000369089 NOC2LQ9Y3T9 749 aaKnown RBP11.07□□□□□ -0.64
PRDM1-201ENST00000369089 EXOC1LA0A1B0GW35 172 aa11.06□□□□□ -0.64
PRDM1-201ENST00000369089 PORP16435 677 aaPredicted RBP11.06□□□□□ -0.64
PRDM1-201ENST00000369089 PRLRP16471 622 aa11.06□□□□□ -0.64
PRDM1-201ENST00000369089 CHN2P52757 468 aa11.06□□□□□ -0.64
PRDM1-201ENST00000369089 DEFA1P59665 94 aa11.06□□□□□ -0.64
PRDM1-201ENST00000369089 DEFA3P59666 94 aa11.06□□□□□ -0.64
PRDM1-201ENST00000369089 PARP6Q2NL67 630 aa11.06□□□□□ -0.64
PRDM1-201ENST00000369089 NXNQ6DKJ4 435 aa11.06□□□□□ -0.64
PRDM1-201ENST00000369089 PACS1Q6VY07 963 aa11.06□□□□□ -0.64
PRDM1-201ENST00000369089 CATIPQ7Z7H3 387 aa11.06□□□□□ -0.64
PRDM1-201ENST00000369089 CCDC125Q86Z20 511 aa11.06□□□□□ -0.64
PRDM1-201ENST00000369089 GALNT4Q8N4A0 578 aa11.06□□□□□ -0.64
PRDM1-201ENST00000369089 RMDN1Q96DB5 314 aa11.06□□□□□ -0.64
PRDM1-201ENST00000369089 THTPAQ9BU02 230 aa11.06□□□□□ -0.64
PRDM1-201ENST00000369089 PIDD1Q9HB75 910 aa11.06□□□□□ -0.64
PRDM1-201ENST00000369089 ZNF233A6NK53 670 aa11.06□□□□□ -0.64
PRDM1-201ENST00000369089 B2RBV5 119 aa11.06□□□□□ -0.64
PRDM1-201ENST00000369089 IDH3BO43837 385 aa11.06□□□□□ -0.64
PRDM1-201ENST00000369089 PSMG1O95456 288 aa11.06□□□□□ -0.64
PRDM1-201ENST00000369089 ZNF12P17014 697 aa11.06□□□□□ -0.64
PRDM1-201ENST00000369089 CYP7A1P22680 504 aa11.06□□□□□ -0.64
PRDM1-201ENST00000369089 EPHB2P29323 1055 aa11.06□□□□□ -0.64
PRDM1-201ENST00000369089 HALP42357 657 aa11.06□□□□□ -0.64
PRDM1-201ENST00000369089 ARHGAP4P98171 946 aa11.06□□□□□ -0.64
PRDM1-201ENST00000369089 OASLQ15646 514 aaKnown RBP11.06□□□□□ -0.64
PRDM1-201ENST00000369089 EZH2Q15910 746 aaKnown RBP11.06□□□□□ -0.64
PRDM1-201ENST00000369089 ATXN2LQ8WWM7 1075 aaKnown RBP11.06□□□□□ -0.64
PRDM1-201ENST00000369089 APPBP2Q92624 585 aa11.06□□□□□ -0.64
PRDM1-201ENST00000369089 DACH2Q96NX9 599 aa11.06□□□□□ -0.64
PRDM1-201ENST00000369089 DEPDC7Q96QD5 511 aa11.06□□□□□ -0.64
PRDM1-201ENST00000369089 DBNDD2Q9BQY9 259 aa11.06□□□□□ -0.64
PRDM1-201ENST00000369089 UBN1Q9NPG3 1134 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms