RNA–Protein interactions for RNA: ENST00000368671.3

CLRN3-201, Transcript of clarin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLRN3, Length 1,152 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN3-201ENST00000368671 TPRNQ4KMQ1 711 aa11.6□□□□□ -0.55
CLRN3-201ENST00000368671 CES5AQ6NT32 575 aa11.6□□□□□ -0.55
CLRN3-201ENST00000368671 MOXD1Q6UVY6 613 aa11.6□□□□□ -0.55
CLRN3-201ENST00000368671 ANO5Q75V66 913 aa11.6□□□□□ -0.55
CLRN3-201ENST00000368671 CATSPER4Q7RTX7 472 aa11.6□□□□□ -0.55
CLRN3-201ENST00000368671 KRT25Q7Z3Z0 450 aa11.6□□□□□ -0.55
CLRN3-201ENST00000368671 ZNF410Q86VK4 478 aa11.6□□□□□ -0.55
CLRN3-201ENST00000368671 TMEM173Q86WV6 379 aaPredicted RBP11.6□□□□□ -0.55
CLRN3-201ENST00000368671 FBXL6Q8N531 539 aa11.6□□□□□ -0.55
CLRN3-201ENST00000368671 TMEM87AQ8NBN3 555 aa11.6□□□□□ -0.55
CLRN3-201ENST00000368671 AUTS2Q8WXX7 1259 aa11.6□□□□□ -0.55
CLRN3-201ENST00000368671 ZNF274Q96GC6 653 aaPredicted RBP11.6□□□□□ -0.55
CLRN3-201ENST00000368671 MBOAT7Q96N66 472 aa11.6□□□□□ -0.55
CLRN3-201ENST00000368671 INO80BQ9C086 356 aaPredicted RBP11.6□□□□□ -0.55
CLRN3-201ENST00000368671 GBP3Q9H0R5 595 aa11.6□□□□□ -0.55
CLRN3-201ENST00000368671 SLKQ9H2G2 1235 aaPredicted RBP11.6□□□□□ -0.55
CLRN3-201ENST00000368671 FAM105AQ9NUU6 356 aa11.6□□□□□ -0.55
CLRN3-201ENST00000368671 ARID2Q68CP9 1835 aa11.6□□□□□ -0.55
CLRN3-201ENST00000368671 CCDC194A0A1B0GVG4 234 aa11.59□□□□□ -0.55
CLRN3-201ENST00000368671 MEIS3P2A8K0S8 358 aa11.59□□□□□ -0.55
CLRN3-201ENST00000368671 EML1O00423 815 aa11.59□□□□□ -0.55
CLRN3-201ENST00000368671 DTNBO60941 627 aa11.59□□□□□ -0.55
CLRN3-201ENST00000368671 WEE2P0C1S8 567 aa11.59□□□□□ -0.55
CLRN3-201ENST00000368671 SKIP12755 728 aa11.59□□□□□ -0.55
CLRN3-201ENST00000368671 NPEPPSP55786 919 aa11.59□□□□□ -0.55
CLRN3-201ENST00000368671 RNASELQ05823 741 aaKnown RBP11.59□□□□□ -0.55
CLRN3-201ENST00000368671 NOMO2Q5JPE7 1267 aa11.59□□□□□ -0.55
CLRN3-201ENST00000368671 RARS2Q5T160 578 aaKnown RBP11.59□□□□□ -0.55
CLRN3-201ENST00000368671 GALNT17Q6IS24 598 aa11.59□□□□□ -0.55
CLRN3-201ENST00000368671 GLB1LQ6UWU2 654 aa11.59□□□□□ -0.55
CLRN3-201ENST00000368671 VPS52Q8N1B4 723 aa11.59□□□□□ -0.55
CLRN3-201ENST00000368671 PHOX2BQ99453 314 aa11.59□□□□□ -0.55
CLRN3-201ENST00000368671 JPH2Q9BR39 696 aaPredicted RBP11.59□□□□□ -0.55
CLRN3-201ENST00000368671 ZBP1Q9H171 429 aa11.59□□□□□ -0.55
CLRN3-201ENST00000368671 POMKQ9H5K3 350 aa11.59□□□□□ -0.55
CLRN3-201ENST00000368671 NRDE2Q9H7Z3 1164 aa11.59□□□□□ -0.55
CLRN3-201ENST00000368671 PDRG1Q9NUG6 133 aa11.59□□□□□ -0.55
CLRN3-201ENST00000368671 TBC1D13Q9NVG8 400 aa11.59□□□□□ -0.55
CLRN3-201ENST00000368671 NR2E1Q9Y466 385 aa11.59□□□□□ -0.55
CLRN3-201ENST00000368671 C2CD4DB7Z1M9 353 aa11.58□□□□□ -0.56
CLRN3-201ENST00000368671 BHMG1C9JSJ3 638 aaPredicted RBP11.58□□□□□ -0.56
CLRN3-201ENST00000368671 MARCH6O60337 910 aa11.58□□□□□ -0.56
CLRN3-201ENST00000368671 OFD1O75665 1012 aa11.58□□□□□ -0.56
CLRN3-201ENST00000368671 QARSP47897 775 aaKnown RBP11.58□□□□□ -0.56
CLRN3-201ENST00000368671 RAB27AP51159 221 aa11.58□□□□□ -0.56
CLRN3-201ENST00000368671 POLGP54098 1239 aaPredicted RBP11.58□□□□□ -0.56
CLRN3-201ENST00000368671 PTPN5P54829 565 aa11.58□□□□□ -0.56
CLRN3-201ENST00000368671 VCPP55072 806 aaKnown RBP11.58□□□□□ -0.56
CLRN3-201ENST00000368671 ITIH3Q06033 890 aa11.58□□□□□ -0.56
CLRN3-201ENST00000368671 KANK3Q6NY19 840 aa11.58□□□□□ -0.56
CLRN3-201ENST00000368671 NEK8Q86SG6 692 aa11.58□□□□□ -0.56
CLRN3-201ENST00000368671 C12orf76Q8N812 135 aaPredicted RBP11.58□□□□□ -0.56
CLRN3-201ENST00000368671 BCL7CQ8WUZ0 217 aaPredicted RBP11.58□□□□□ -0.56
CLRN3-201ENST00000368671 PGBD4Q96DM1 585 aa11.58□□□□□ -0.56
CLRN3-201ENST00000368671 ASIC4Q96FT7 647 aa11.58□□□□□ -0.56
CLRN3-201ENST00000368671 IGSF21Q96ID5 467 aa11.58□□□□□ -0.56
CLRN3-201ENST00000368671 CEP170P1Q96L14 293 aa11.58□□□□□ -0.56
CLRN3-201ENST00000368671 TRAIPQ9BWF2 469 aa11.58□□□□□ -0.56
CLRN3-201ENST00000368671 ADAM7Q9H2U9 754 aa11.58□□□□□ -0.56
CLRN3-201ENST00000368671 CYP26B1Q9NR63 512 aa11.58□□□□□ -0.56
CLRN3-201ENST00000368671 DNAJB4Q9UDY4 337 aa11.58□□□□□ -0.56
CLRN3-201ENST00000368671 VAV3Q9UKW4 847 aa11.58□□□□□ -0.56
CLRN3-201ENST00000368671 COL4A3BPQ9Y5P4 624 aa11.58□□□□□ -0.56
CLRN3-201ENST00000368671 TECTAO75443 2155 aa11.58□□□□□ -0.56
CLRN3-201ENST00000368671 EPB41L2O43491 1005 aaKnown RBP11.57□□□□□ -0.56
CLRN3-201ENST00000368671 CCNT1O60563 726 aaKnown RBP11.57□□□□□ -0.56
CLRN3-201ENST00000368671 DKC1O60832 514 aaKnown RBP eCLIP11.57□□□□□ -0.56
CLRN3-201ENST00000368671 CDKL5O76039 1030 aa11.57□□□□□ -0.56
CLRN3-201ENST00000368671 GALTP07902 379 aa11.57□□□□□ -0.56
CLRN3-201ENST00000368671 SRGAP2CP0DJJ0 459 aa11.57□□□□□ -0.56
CLRN3-201ENST00000368671 CTSAP10619 480 aa11.57□□□□□ -0.56
CLRN3-201ENST00000368671 EPCAMP16422 314 aa11.57□□□□□ -0.56
CLRN3-201ENST00000368671 MTHFRP42898 656 aa11.57□□□□□ -0.56
CLRN3-201ENST00000368671 SLC11A1P49279 550 aa11.57□□□□□ -0.56
CLRN3-201ENST00000368671 SCRN1Q12765 414 aa11.57□□□□□ -0.56
CLRN3-201ENST00000368671 PPP2R5CQ13362 524 aa11.57□□□□□ -0.56
CLRN3-201ENST00000368671 PROX2Q3B8N5 592 aa11.57□□□□□ -0.56
CLRN3-201ENST00000368671 NCAPH2Q6IBW4 605 aa11.57□□□□□ -0.56
CLRN3-201ENST00000368671 PIK3AP1Q6ZUJ8 805 aa11.57□□□□□ -0.56
CLRN3-201ENST00000368671 DDX53Q86TM3 631 aaKnown RBP11.57□□□□□ -0.56
CLRN3-201ENST00000368671 FAM177A1Q8N128 213 aaPredicted RBP11.57□□□□□ -0.56
CLRN3-201ENST00000368671 KREMEN2Q8NCW0 462 aa11.57□□□□□ -0.56
CLRN3-201ENST00000368671 URGCPQ8TCY9 931 aa11.57□□□□□ -0.56
CLRN3-201ENST00000368671 SLC7A3Q8WY07 619 aa11.57□□□□□ -0.56
CLRN3-201ENST00000368671 RSPH1Q8WYR4 309 aa11.57□□□□□ -0.56
CLRN3-201ENST00000368671 TMEM143Q96AN5 459 aa11.57□□□□□ -0.56
CLRN3-201ENST00000368671 RIPOR3Q96MK2 946 aa11.57□□□□□ -0.56
CLRN3-201ENST00000368671 NECTIN4Q96NY8 510 aa11.57□□□□□ -0.56
CLRN3-201ENST00000368671 PRRX2Q99811 253 aa11.57□□□□□ -0.56
CLRN3-201ENST00000368671 PHF20Q9BVI0 1012 aa11.57□□□□□ -0.56
CLRN3-201ENST00000368671 TM6SF1Q9BZW5 370 aa11.57□□□□□ -0.56
CLRN3-201ENST00000368671 IFT122Q9HBG6 1241 aa11.57□□□□□ -0.56
CLRN3-201ENST00000368671 GJB4Q9NTQ9 266 aa11.57□□□□□ -0.56
CLRN3-201ENST00000368671 AGPAT5Q9NUQ2 364 aa11.57□□□□□ -0.56
CLRN3-201ENST00000368671 WRAP73Q9P2S5 460 aaPredicted RBP11.57□□□□□ -0.56
CLRN3-201ENST00000368671 PCDHB2Q9Y5E7 798 aa11.57□□□□□ -0.56
CLRN3-201ENST00000368671 C5orf42Q9H799 3197 aa11.57□□□□□ -0.56
CLRN3-201ENST00000368671 B4GALT3O60512 393 aa11.56□□□□□ -0.56
CLRN3-201ENST00000368671 DDHD2O94830 711 aa11.56□□□□□ -0.56
CLRN3-201ENST00000368671 PDGFBP01127 241 aaPredicted RBP11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms