RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 FZD8Q9H461 694 aa20.99■□□□□ 0.95
CKS1B-203ENST00000368439 POLD4Q9HCU8 107 aa20.99■□□□□ 0.95
CKS1B-203ENST00000368439 PCDHGC5Q9Y5F6 944 aa20.99■□□□□ 0.95
CKS1B-203ENST00000368439 LRRIQ4A6NIV6 560 aa20.98■□□□□ 0.95
CKS1B-203ENST00000368439 FSCN2O14926 492 aa20.98■□□□□ 0.95
CKS1B-203ENST00000368439 CSPG5O95196 566 aa20.98■□□□□ 0.95
CKS1B-203ENST00000368439 GTF2F1P35269 517 aaKnown RBP eCLIP20.98■□□□□ 0.95
CKS1B-203ENST00000368439 LTBRP36941 435 aa20.98■□□□□ 0.95
CKS1B-203ENST00000368439 AFF1P51825 1210 aaKnown RBP20.98■□□□□ 0.95
CKS1B-203ENST00000368439 ERVFC1P60507 584 aa20.98■□□□□ 0.95
CKS1B-203ENST00000368439 RESTQ13127 1097 aa20.98■□□□□ 0.95
CKS1B-203ENST00000368439 FAM187BQ17R55 369 aa20.98■□□□□ 0.95
CKS1B-203ENST00000368439 NOMO2Q5JPE7 1267 aa20.98■□□□□ 0.95
CKS1B-203ENST00000368439 NOTUMQ6P988 496 aa20.98■□□□□ 0.95
CKS1B-203ENST00000368439 GLB1LQ6UWU2 654 aa20.98■□□□□ 0.95
CKS1B-203ENST00000368439 ADGRD2Q7Z7M1 963 aa20.98■□□□□ 0.95
CKS1B-203ENST00000368439 ZNF558Q96NG5 402 aa20.98■□□□□ 0.95
CKS1B-203ENST00000368439 CSRNP2Q9H175 543 aa20.98■□□□□ 0.95
CKS1B-203ENST00000368439 TBC1D13Q9NVG8 400 aa20.98■□□□□ 0.95
CKS1B-203ENST00000368439 DNM3Q9UQ16 869 aa20.98■□□□□ 0.95
CKS1B-203ENST00000368439 LZTS1Q9Y250 596 aa20.98■□□□□ 0.95
CKS1B-203ENST00000368439 IPPQ9Y573 584 aa20.98■□□□□ 0.95
CKS1B-203ENST00000368439 NCOR1O75376 2440 aa20.97■□□□□ 0.95
CKS1B-203ENST00000368439 A0A1B0GUA9 196 aa20.97■□□□□ 0.95
CKS1B-203ENST00000368439 TTLL13PA6NNM8 815 aa20.97■□□□□ 0.95
CKS1B-203ENST00000368439 B4GALT3O60512 393 aa20.97■□□□□ 0.95
CKS1B-203ENST00000368439 NAMPTP43490 491 aa20.97■□□□□ 0.95
CKS1B-203ENST00000368439 SF3A1Q15459 793 aaKnown RBP20.97■□□□□ 0.95
CKS1B-203ENST00000368439 LEXMQ3ZCV2 418 aa20.97■□□□□ 0.95
CKS1B-203ENST00000368439 DAW1Q8N136 415 aa20.97■□□□□ 0.95
CKS1B-203ENST00000368439 SLC39A11Q8N1S5 342 aa20.97■□□□□ 0.95
CKS1B-203ENST00000368439 ADAMTS19Q8TE59 1207 aa20.97■□□□□ 0.95
CKS1B-203ENST00000368439 MRPS27Q92552 414 aaKnown RBP20.97■□□□□ 0.95
CKS1B-203ENST00000368439 PRIMPOLQ96LW4 560 aa20.97■□□□□ 0.95
CKS1B-203ENST00000368439 CCDC113Q9H0I3 377 aa20.97■□□□□ 0.95
CKS1B-203ENST00000368439 RNF39Q9H2S5 420 aa20.97■□□□□ 0.95
CKS1B-203ENST00000368439 NRDE2Q9H7Z3 1164 aa20.97■□□□□ 0.95
CKS1B-203ENST00000368439 MTMR6Q9Y217 621 aa20.97■□□□□ 0.95
CKS1B-203ENST00000368439 CNTNAP2Q9UHC6 1331 aa20.97■□□□□ 0.95
CKS1B-203ENST00000368439 TDRD15B5MCY1 1934 aaKnown RBP20.96■□□□□ 0.95
CKS1B-203ENST00000368439 MYH11P35749 1972 aa20.96■□□□□ 0.95
CKS1B-203ENST00000368439 INPPL1O15357 1258 aa20.96■□□□□ 0.95
CKS1B-203ENST00000368439 EDN1P05305 212 aa20.96■□□□□ 0.95
CKS1B-203ENST00000368439 KCNA5P22460 613 aa20.96■□□□□ 0.95
CKS1B-203ENST00000368439 BCAR1P56945 870 aa20.96■□□□□ 0.95
CKS1B-203ENST00000368439 GRIN1Q05586 938 aa20.96■□□□□ 0.95
CKS1B-203ENST00000368439 RINT1Q6NUQ1 792 aa20.96■□□□□ 0.95
CKS1B-203ENST00000368439 C1orf186Q6ZWK4 172 aa20.96■□□□□ 0.95
CKS1B-203ENST00000368439 CDR2LQ86X02 465 aaPredicted RBP20.96■□□□□ 0.95
CKS1B-203ENST00000368439 CNNM3Q8NE01 707 aa20.96■□□□□ 0.95
CKS1B-203ENST00000368439 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.96■□□□□ 0.95
CKS1B-203ENST00000368439 KIFAP3Q92845 792 aa20.96■□□□□ 0.95
CKS1B-203ENST00000368439 RUSC1Q9BVN2 902 aa20.96■□□□□ 0.95
CKS1B-203ENST00000368439 C2orf40Q9H1Z8 148 aa20.96■□□□□ 0.95
CKS1B-203ENST00000368439 RSAD1Q9HA92 442 aa20.96■□□□□ 0.95
CKS1B-203ENST00000368439 TLR9Q9NR96 1032 aa20.96■□□□□ 0.95
CKS1B-203ENST00000368439 FOXD4L1Q9NU39 408 aa20.96■□□□□ 0.95
CKS1B-203ENST00000368439 PRMT7Q9NVM4 692 aaPredicted RBP20.96■□□□□ 0.95
CKS1B-203ENST00000368439 SPG21Q9NZD8 308 aa20.96■□□□□ 0.95
CKS1B-203ENST00000368439 INPP5FQ9Y2H2 1132 aa20.96■□□□□ 0.95
CKS1B-203ENST00000368439 MYH15Q9Y2K3 1946 aa20.96■□□□□ 0.95
CKS1B-203ENST00000368439 NCK2O43639 380 aa20.95■□□□□ 0.94
CKS1B-203ENST00000368439 BMP15O95972 392 aa20.95■□□□□ 0.94
CKS1B-203ENST00000368439 PPM1AP35813 382 aa20.95■□□□□ 0.94
CKS1B-203ENST00000368439 NCBP1Q09161 790 aaKnown RBP20.95■□□□□ 0.94
CKS1B-203ENST00000368439 MAPK7Q13164 816 aa20.95■□□□□ 0.94
CKS1B-203ENST00000368439 PTPAQ15257 358 aa20.95■□□□□ 0.94
CKS1B-203ENST00000368439 TMEM119Q4V9L6 283 aa20.95■□□□□ 0.94
CKS1B-203ENST00000368439 TMEM173Q86WV6 379 aaPredicted RBP20.95■□□□□ 0.94
CKS1B-203ENST00000368439 ZNF280BQ86YH2 543 aa20.95■□□□□ 0.94
CKS1B-203ENST00000368439 ZBTB8OSQ8IWT0 167 aa20.95■□□□□ 0.94
CKS1B-203ENST00000368439 KCTD17Q8N5Z5 321 aa20.95■□□□□ 0.94
CKS1B-203ENST00000368439 AK8Q96MA6 479 aa20.95■□□□□ 0.94
CKS1B-203ENST00000368439 KIFC3Q9BVG8 833 aa20.95■□□□□ 0.94
CKS1B-203ENST00000368439 HES2Q9Y543 173 aa20.95■□□□□ 0.94
CKS1B-203ENST00000368439 NT5C1B-RDH14C9J2C7 533 aa20.94■□□□□ 0.94
CKS1B-203ENST00000368439 LINC01565O15544 149 aa20.94■□□□□ 0.94
CKS1B-203ENST00000368439 DDHD2O94830 711 aa20.94■□□□□ 0.94
CKS1B-203ENST00000368439 ITGA4P13612 1032 aa20.94■□□□□ 0.94
CKS1B-203ENST00000368439 DLX2Q07687 328 aaPredicted RBP20.94■□□□□ 0.94
CKS1B-203ENST00000368439 ADAM15Q13444 863 aa20.94■□□□□ 0.94
CKS1B-203ENST00000368439 PPP2R5AQ15172 486 aa20.94■□□□□ 0.94
CKS1B-203ENST00000368439 FAM173BQ6P4H8 233 aa20.94■□□□□ 0.94
CKS1B-203ENST00000368439 SLC27A1Q6PCB7 646 aa20.94■□□□□ 0.94
CKS1B-203ENST00000368439 LRRC15Q8TF66 581 aa20.94■□□□□ 0.94
CKS1B-203ENST00000368439 PLIN2Q99541 437 aa20.94■□□□□ 0.94
CKS1B-203ENST00000368439 NT5C3AQ9H0P0 336 aa20.94■□□□□ 0.94
CKS1B-203ENST00000368439 NXF3Q9H4D5 531 aaKnown RBP20.94■□□□□ 0.94
CKS1B-203ENST00000368439 CLDND1Q9NY35 253 aa20.94■□□□□ 0.94
CKS1B-203ENST00000368439 DNAJB4Q9UDY4 337 aa20.94■□□□□ 0.94
CKS1B-203ENST00000368439 CLIC4Q9Y696 253 aa20.94■□□□□ 0.94
CKS1B-203ENST00000368439 H3BQ06 376 aaPredicted RBP20.93■□□□□ 0.94
CKS1B-203ENST00000368439 ACKR2O00590 384 aa20.93■□□□□ 0.94
CKS1B-203ENST00000368439 HIP1RO75146 1068 aa20.93■□□□□ 0.94
CKS1B-203ENST00000368439 ZC3H11AO75152 810 aaKnown RBP eCLIP20.93■□□□□ 0.94
CKS1B-203ENST00000368439 GALTP07902 379 aa20.93■□□□□ 0.94
CKS1B-203ENST00000368439 SLC12A3P55017 1021 aa20.93■□□□□ 0.94
CKS1B-203ENST00000368439 ZRSR1Q15695 479 aaKnown RBP20.93■□□□□ 0.94
CKS1B-203ENST00000368439 CABP7Q86V35 215 aa20.93■□□□□ 0.94
CKS1B-203ENST00000368439 SYT2Q8N9I0 419 aaPredicted RBP20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms