RNA–Protein interactions for RNA: ENST00000368010.3

PFDN2-201, Transcript of prefoldin subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN2, Length 677 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN2-201ENST00000368010 PLIN2Q99541 437 aa26.45■■□□□ 1.82
PFDN2-201ENST00000368010 ZSCAN16Q9H4T2 348 aaPredicted RBP26.45■■□□□ 1.82
PFDN2-201ENST00000368010 INPP5FQ9Y2H2 1132 aa26.45■■□□□ 1.82
PFDN2-201ENST00000368010 OFD1O75665 1012 aa26.44■■□□□ 1.82
PFDN2-201ENST00000368010 NCLP19338 710 aaKnown RBP26.44■■□□□ 1.82
PFDN2-201ENST00000368010 DNAJB1P25685 340 aa26.44■■□□□ 1.82
PFDN2-201ENST00000368010 PPM1AP35813 382 aa26.44■■□□□ 1.82
PFDN2-201ENST00000368010 TFF2Q03403 129 aa26.44■■□□□ 1.82
PFDN2-201ENST00000368010 CAMK1Q14012 370 aa26.44■■□□□ 1.82
PFDN2-201ENST00000368010 MAPK6Q16659 721 aa26.44■■□□□ 1.82
PFDN2-201ENST00000368010 NOMO2Q5JPE7 1267 aa26.44■■□□□ 1.82
PFDN2-201ENST00000368010 FAM173BQ6P4H8 233 aa26.44■■□□□ 1.82
PFDN2-201ENST00000368010 AGMOQ6ZNB7 445 aa26.44■■□□□ 1.82
PFDN2-201ENST00000368010 CALML4Q96GE6 196 aa26.44■■□□□ 1.82
PFDN2-201ENST00000368010 RUSC1Q9BVN2 902 aa26.44■■□□□ 1.82
PFDN2-201ENST00000368010 EIF2AQ9BY44 585 aaKnown RBP26.44■■□□□ 1.82
PFDN2-201ENST00000368010 TRIM6Q9C030 488 aaPredicted RBP26.44■■□□□ 1.82
PFDN2-201ENST00000368010 FZD8Q9H461 694 aa26.44■■□□□ 1.82
PFDN2-201ENST00000368010 RSAD1Q9HA92 442 aa26.44■■□□□ 1.82
PFDN2-201ENST00000368010 POLD4Q9HCU8 107 aa26.44■■□□□ 1.82
PFDN2-201ENST00000368010 IPPQ9Y573 584 aa26.44■■□□□ 1.82
PFDN2-201ENST00000368010 CLIC4Q9Y696 253 aa26.44■■□□□ 1.82
PFDN2-201ENST00000368010 UNC80Q8N2C7 3258 aa26.43■■□□□ 1.82
PFDN2-201ENST00000368010 SSBP05455 408 aaKnown RBP eCLIP26.43■■□□□ 1.82
PFDN2-201ENST00000368010 ITGA4P13612 1032 aa26.43■■□□□ 1.82
PFDN2-201ENST00000368010 FAM187BQ17R55 369 aa26.43■■□□□ 1.82
PFDN2-201ENST00000368010 TMEM119Q4V9L6 283 aa26.43■■□□□ 1.82
PFDN2-201ENST00000368010 RINT1Q6NUQ1 792 aa26.43■■□□□ 1.82
PFDN2-201ENST00000368010 URGCPQ8TCY9 931 aa26.43■■□□□ 1.82
PFDN2-201ENST00000368010 SYMPKQ92797 1274 aaKnown RBP26.43■■□□□ 1.82
PFDN2-201ENST00000368010 DRC1Q96MC2 740 aa26.43■■□□□ 1.82
PFDN2-201ENST00000368010 UBN1Q9NPG3 1134 aa26.43■■□□□ 1.82
PFDN2-201ENST00000368010 A0A1B0GUA9 196 aa26.42■■□□□ 1.82
PFDN2-201ENST00000368010 DLL1O00548 723 aa26.42■■□□□ 1.82
PFDN2-201ENST00000368010 PBX3P40426 434 aa26.42■■□□□ 1.82
PFDN2-201ENST00000368010 PLCB3Q01970 1234 aa26.42■■□□□ 1.82
PFDN2-201ENST00000368010 GRIN1Q05586 938 aa26.42■■□□□ 1.82
PFDN2-201ENST00000368010 PTPAQ15257 358 aa26.42■■□□□ 1.82
PFDN2-201ENST00000368010 SLC27A1Q6PCB7 646 aa26.42■■□□□ 1.82
PFDN2-201ENST00000368010 HACE1Q8IYU2 909 aa26.42■■□□□ 1.82
PFDN2-201ENST00000368010 SYT2Q8N9I0 419 aaPredicted RBP26.42■■□□□ 1.82
PFDN2-201ENST00000368010 SMG8Q8ND04 991 aaKnown RBP26.42■■□□□ 1.82
PFDN2-201ENST00000368010 PPP2R3CQ969Q6 453 aa26.42■■□□□ 1.82
PFDN2-201ENST00000368010 TIPINQ9BVW5 301 aa26.42■■□□□ 1.82
PFDN2-201ENST00000368010 UBE2ZQ9H832 354 aaPredicted RBP26.42■■□□□ 1.82
PFDN2-201ENST00000368010 TBC1D13Q9NVG8 400 aa26.42■■□□□ 1.82
PFDN2-201ENST00000368010 HIP1RO75146 1068 aa26.41■■□□□ 1.82
PFDN2-201ENST00000368010 PRKCBP05771 671 aa26.41■■□□□ 1.82
PFDN2-201ENST00000368010 IRS1P35568 1242 aa26.41■■□□□ 1.82
PFDN2-201ENST00000368010 ALDH7A1P49419 539 aaKnown RBP26.41■■□□□ 1.82
PFDN2-201ENST00000368010 EFNA5P52803 228 aa26.41■■□□□ 1.82
PFDN2-201ENST00000368010 RNASELQ05823 741 aaKnown RBP26.41■■□□□ 1.82
PFDN2-201ENST00000368010 PRPF4BQ13523 1007 aaKnown RBP26.41■■□□□ 1.82
PFDN2-201ENST00000368010 TMEM132AQ24JP5 1023 aa26.41■■□□□ 1.82
PFDN2-201ENST00000368010 C1orf186Q6ZWK4 172 aa26.41■■□□□ 1.82
PFDN2-201ENST00000368010 RASSF8Q8NHQ8 419 aa26.41■■□□□ 1.82
PFDN2-201ENST00000368010 MRPS27Q92552 414 aaKnown RBP26.41■■□□□ 1.82
PFDN2-201ENST00000368010 KIFC3Q9BVG8 833 aa26.41■■□□□ 1.82
PFDN2-201ENST00000368010 COL25A1Q9BXS0 654 aaPredicted RBP26.41■■□□□ 1.82
PFDN2-201ENST00000368010 CCDC113Q9H0I3 377 aa26.41■■□□□ 1.82
PFDN2-201ENST00000368010 TLR9Q9NR96 1032 aa26.41■■□□□ 1.82
PFDN2-201ENST00000368010 SPG21Q9NZD8 308 aa26.41■■□□□ 1.82
PFDN2-201ENST00000368010 PUF60Q9UHX1 559 aaKnown RBP26.41■■□□□ 1.82
PFDN2-201ENST00000368010 LZTS1Q9Y250 596 aa26.41■■□□□ 1.82
PFDN2-201ENST00000368010 CARNS1A5YM72 827 aa26.4■■□□□ 1.82
PFDN2-201ENST00000368010 ZC3H11AO75152 810 aaKnown RBP eCLIP26.4■■□□□ 1.82
PFDN2-201ENST00000368010 PLA2G4BP0C869 781 aa26.4■■□□□ 1.82
PFDN2-201ENST00000368010 LIG1P18858 919 aa26.4■■□□□ 1.82
PFDN2-201ENST00000368010 GUCY2CP25092 1073 aa26.4■■□□□ 1.82
PFDN2-201ENST00000368010 BCAR1P56945 870 aa26.4■■□□□ 1.82
PFDN2-201ENST00000368010 CEBPZQ03701 1054 aaKnown RBP26.4■■□□□ 1.82
PFDN2-201ENST00000368010 KRT17Q04695 432 aa26.4■■□□□ 1.82
PFDN2-201ENST00000368010 DMP1Q13316 513 aaPredicted RBP26.4■■□□□ 1.82
PFDN2-201ENST00000368010 CDR2LQ86X02 465 aaPredicted RBP26.4■■□□□ 1.82
PFDN2-201ENST00000368010 DAW1Q8N136 415 aa26.4■■□□□ 1.82
PFDN2-201ENST00000368010 SLC39A11Q8N1S5 342 aa26.4■■□□□ 1.82
PFDN2-201ENST00000368010 MICAL1Q8TDZ2 1067 aa26.4■■□□□ 1.82
PFDN2-201ENST00000368010 PABPC5Q96DU9 382 aaKnown RBP26.4■■□□□ 1.82
PFDN2-201ENST00000368010 KCND2Q9NZV8 630 aa26.4■■□□□ 1.82
PFDN2-201ENST00000368010 KANSL3Q9P2N6 904 aa26.4■■□□□ 1.82
PFDN2-201ENST00000368010 HES2Q9Y543 173 aa26.4■■□□□ 1.82
PFDN2-201ENST00000368010 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP26.39■■□□□ 1.82
PFDN2-201ENST00000368010 CCDC169A6NNP5 214 aa26.39■■□□□ 1.82
PFDN2-201ENST00000368010 ACKR2O00590 384 aa26.39■■□□□ 1.82
PFDN2-201ENST00000368010 NCK2O43639 380 aa26.39■■□□□ 1.82
PFDN2-201ENST00000368010 NPTXRO95502 500 aa26.39■■□□□ 1.82
PFDN2-201ENST00000368010 PDIA4P13667 645 aaKnown RBP26.39■■□□□ 1.82
PFDN2-201ENST00000368010 MARCKSP29966 332 aaPredicted RBP26.39■■□□□ 1.82
PFDN2-201ENST00000368010 SLC12A3P55017 1021 aa26.39■■□□□ 1.82
PFDN2-201ENST00000368010 PEX3P56589 373 aa26.39■■□□□ 1.82
PFDN2-201ENST00000368010 MAPK7Q13164 816 aa26.39■■□□□ 1.82
PFDN2-201ENST00000368010 USP28Q96RU2 1077 aa26.39■■□□□ 1.82
PFDN2-201ENST00000368010 APOL6Q9BWW8 343 aa26.39■■□□□ 1.82
PFDN2-201ENST00000368010 NXF3Q9H4D5 531 aaKnown RBP26.39■■□□□ 1.82
PFDN2-201ENST00000368010 NRDE2Q9H7Z3 1164 aa26.39■■□□□ 1.82
PFDN2-201ENST00000368010 C17orf75Q9HAS0 396 aa26.39■■□□□ 1.82
PFDN2-201ENST00000368010 PLXNA4Q9HCM2 1894 aa26.38■■□□□ 1.81
PFDN2-201ENST00000368010 N4BP3O15049 544 aa26.38■■□□□ 1.81
PFDN2-201ENST00000368010 KCNA5P22460 613 aa26.38■■□□□ 1.81
PFDN2-201ENST00000368010 NPTX2P47972 431 aa26.38■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms