RNA–Protein interactions for RNA: ENST00000367404.8

NUP43-203, Transcript of nucleoporin 43, humanhuman

TSL 2 BASIC

Gene NUP43, Length 1,089 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-203ENST00000367404 CTSAP10619 480 aa11.06□□□□□ -0.64
NUP43-203ENST00000367404 FGFR4P22455 802 aa11.06□□□□□ -0.64
NUP43-203ENST00000367404 PHKA2P46019 1235 aa11.06□□□□□ -0.64
NUP43-203ENST00000367404 METAP2P50579 478 aaKnown RBP eCLIP11.06□□□□□ -0.64
NUP43-203ENST00000367404 GIT2Q14161 759 aa11.06□□□□□ -0.64
NUP43-203ENST00000367404 BRICD5Q6PL45 260 aa11.06□□□□□ -0.64
NUP43-203ENST00000367404 ASCL5Q7RTU5 278 aa11.06□□□□□ -0.64
NUP43-203ENST00000367404 TRMT1LQ7Z2T5 733 aaKnown RBP11.06□□□□□ -0.64
NUP43-203ENST00000367404 TDRD5Q8NAT2 981 aaKnown RBP11.06□□□□□ -0.64
NUP43-203ENST00000367404 RNF169Q8NCN4 708 aa11.06□□□□□ -0.64
NUP43-203ENST00000367404 SLC22A17Q8WUG5 538 aa11.06□□□□□ -0.64
NUP43-203ENST00000367404 TMEM169Q96HH4 297 aa11.06□□□□□ -0.64
NUP43-203ENST00000367404 ZNF668Q96K58 619 aaPredicted RBP11.06□□□□□ -0.64
NUP43-203ENST00000367404 YTHDC1Q96MU7 727 aaKnown RBP11.06□□□□□ -0.64
NUP43-203ENST00000367404 RIT2Q99578 217 aa11.06□□□□□ -0.64
NUP43-203ENST00000367404 CHST12Q9NRB3 414 aa11.06□□□□□ -0.64
NUP43-203ENST00000367404 DISC1Q9NRI5 854 aa11.06□□□□□ -0.64
NUP43-203ENST00000367404 NRBP2Q9NSY0 501 aa11.06□□□□□ -0.64
NUP43-203ENST00000367404 PLXNA3P51805 1871 aa11.06□□□□□ -0.64
NUP43-203ENST00000367404 CCDC196A0A1B0GTZ2 297 aa11.05□□□□□ -0.64
NUP43-203ENST00000367404 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.05□□□□□ -0.64
NUP43-203ENST00000367404 NT5C1B-RDH14C9J2C7 533 aa11.05□□□□□ -0.64
NUP43-203ENST00000367404 PRPF3O43395 683 aaKnown RBP11.05□□□□□ -0.64
NUP43-203ENST00000367404 STBD1O95210 358 aa11.05□□□□□ -0.64
NUP43-203ENST00000367404 ASGR2P07307 311 aa11.05□□□□□ -0.64
NUP43-203ENST00000367404 EPCAMP16422 314 aa11.05□□□□□ -0.64
NUP43-203ENST00000367404 GNA11P29992 359 aa11.05□□□□□ -0.64
NUP43-203ENST00000367404 SFNP31947 248 aa11.05□□□□□ -0.64
NUP43-203ENST00000367404 ALDH7A1P49419 539 aaKnown RBP11.05□□□□□ -0.64
NUP43-203ENST00000367404 CLCN5P51795 746 aa11.05□□□□□ -0.64
NUP43-203ENST00000367404 JAK3P52333 1124 aa11.05□□□□□ -0.64
NUP43-203ENST00000367404 TBC1D8BQ0IIM8 1120 aa11.05□□□□□ -0.64
NUP43-203ENST00000367404 DRP2Q13474 957 aa11.05□□□□□ -0.64
NUP43-203ENST00000367404 KRT32Q14532 448 aa11.05□□□□□ -0.64
NUP43-203ENST00000367404 BMP2KLQ5H9B9 411 aa11.05□□□□□ -0.64
NUP43-203ENST00000367404 RARS2Q5T160 578 aaKnown RBP11.05□□□□□ -0.64
NUP43-203ENST00000367404 CWF19L1Q69YN2 538 aaKnown RBP11.05□□□□□ -0.64
NUP43-203ENST00000367404 B3GNT9Q6UX72 402 aa11.05□□□□□ -0.64
NUP43-203ENST00000367404 RNF19BQ6ZMZ0 732 aa11.05□□□□□ -0.64
NUP43-203ENST00000367404 DDX53Q86TM3 631 aaKnown RBP11.05□□□□□ -0.64
NUP43-203ENST00000367404 VPS52Q8N1B4 723 aa11.05□□□□□ -0.64
NUP43-203ENST00000367404 RDM1Q8NG50 284 aa11.05□□□□□ -0.64
NUP43-203ENST00000367404 BCL7CQ8WUZ0 217 aaPredicted RBP11.05□□□□□ -0.64
NUP43-203ENST00000367404 SLC5A5Q92911 643 aa11.05□□□□□ -0.64
NUP43-203ENST00000367404 IGSF21Q96ID5 467 aa11.05□□□□□ -0.64
NUP43-203ENST00000367404 VN1R3Q9BXE9 311 aa11.05□□□□□ -0.64
NUP43-203ENST00000367404 SAMM50Q9Y512 469 aa11.05□□□□□ -0.64
NUP43-203ENST00000367404 ZC3H11AO75152 810 aaKnown RBP eCLIP11.04□□□□□ -0.64
NUP43-203ENST00000367404 CXCL14O95715 111 aa11.04□□□□□ -0.64
NUP43-203ENST00000367404 HMGB1P09429 215 aaKnown RBP11.04□□□□□ -0.64
NUP43-203ENST00000367404 WEE2P0C1S8 567 aa11.04□□□□□ -0.64
NUP43-203ENST00000367404 CDC42EP1Q00587 391 aa11.04□□□□□ -0.64
NUP43-203ENST00000367404 FOXK2Q01167 660 aa11.04□□□□□ -0.64
NUP43-203ENST00000367404 BMS1Q14692 1282 aaKnown RBP11.04□□□□□ -0.64
NUP43-203ENST00000367404 PTPN14Q15678 1187 aa11.04□□□□□ -0.64
NUP43-203ENST00000367404 NTRK3Q16288 839 aa11.04□□□□□ -0.64
NUP43-203ENST00000367404 ZNF410Q86VK4 478 aa11.04□□□□□ -0.64
NUP43-203ENST00000367404 FBXL16Q8N461 479 aa11.04□□□□□ -0.64
NUP43-203ENST00000367404 C12orf76Q8N812 135 aaPredicted RBP11.04□□□□□ -0.64
NUP43-203ENST00000367404 FEZF2Q8TBJ5 459 aa11.04□□□□□ -0.64
NUP43-203ENST00000367404 BICD2Q8TD16 824 aa11.04□□□□□ -0.64
NUP43-203ENST00000367404 AUTS2Q8WXX7 1259 aa11.04□□□□□ -0.64
NUP43-203ENST00000367404 SCLT1Q96NL6 688 aa11.04□□□□□ -0.64
NUP43-203ENST00000367404 NIFKQ9BYG3 293 aaKnown RBP11.04□□□□□ -0.64
NUP43-203ENST00000367404 GCOM2Q9BZD3 368 aaPredicted RBP11.04□□□□□ -0.64
NUP43-203ENST00000367404 UNC45AQ9H3U1 944 aa11.04□□□□□ -0.64
NUP43-203ENST00000367404 NRDE2Q9H7Z3 1164 aa11.04□□□□□ -0.64
NUP43-203ENST00000367404 SFXN1Q9H9B4 322 aa11.04□□□□□ -0.64
NUP43-203ENST00000367404 TBC1D13Q9NVG8 400 aa11.04□□□□□ -0.64
NUP43-203ENST00000367404 A0A087WZ62 844 aa11.03□□□□□ -0.64
NUP43-203ENST00000367404 MEIS3P2A8K0S8 358 aa11.03□□□□□ -0.64
NUP43-203ENST00000367404 CHMP2AO43633 222 aa11.03□□□□□ -0.64
NUP43-203ENST00000367404 B4GALT3O60512 393 aa11.03□□□□□ -0.64
NUP43-203ENST00000367404 GAS7O60861 476 aa11.03□□□□□ -0.64
NUP43-203ENST00000367404 ZNF623O75123 536 aa11.03□□□□□ -0.64
NUP43-203ENST00000367404 CSDE1O75534 798 aaKnown RBP11.03□□□□□ -0.64
NUP43-203ENST00000367404 PSMD10O75832 226 aa11.03□□□□□ -0.64
NUP43-203ENST00000367404 GALTP07902 379 aa11.03□□□□□ -0.64
NUP43-203ENST00000367404 SKIP12755 728 aa11.03□□□□□ -0.64
NUP43-203ENST00000367404 SFPQP23246 707 aaKnown RBP eCLIP11.03□□□□□ -0.64
NUP43-203ENST00000367404 RAB27AP51159 221 aa11.03□□□□□ -0.64
NUP43-203ENST00000367404 USP11P51784 963 aa11.03□□□□□ -0.64
NUP43-203ENST00000367404 NOMO2Q5JPE7 1267 aa11.03□□□□□ -0.64
NUP43-203ENST00000367404 ATAT1Q5SQI0 421 aa11.03□□□□□ -0.64
NUP43-203ENST00000367404 LRCH2Q5VUJ6 765 aa11.03□□□□□ -0.64
NUP43-203ENST00000367404 KANK3Q6NY19 840 aa11.03□□□□□ -0.64
NUP43-203ENST00000367404 GPR149Q86SP6 731 aa11.03□□□□□ -0.64
NUP43-203ENST00000367404 PPFIBP1Q86W92 1011 aa11.03□□□□□ -0.64
NUP43-203ENST00000367404 CCDC148Q8NFR7 591 aa11.03□□□□□ -0.64
NUP43-203ENST00000367404 KCNB2Q92953 911 aa11.03□□□□□ -0.64
NUP43-203ENST00000367404 LPPQ93052 612 aa11.03□□□□□ -0.64
NUP43-203ENST00000367404 CCDC136Q96JN2 1154 aa11.03□□□□□ -0.64
NUP43-203ENST00000367404 FDXACB1Q9BRP7 624 aaPredicted RBP11.03□□□□□ -0.64
NUP43-203ENST00000367404 TEKT3Q9BXF9 490 aa11.03□□□□□ -0.64
NUP43-203ENST00000367404 RNF26Q9BY78 433 aaPredicted RBP11.03□□□□□ -0.64
NUP43-203ENST00000367404 AGXT2Q9BYV1 514 aa11.03□□□□□ -0.64
NUP43-203ENST00000367404 PRDM9Q9NQV7 894 aa11.03□□□□□ -0.64
NUP43-203ENST00000367404 CYP26B1Q9NR63 512 aa11.03□□□□□ -0.64
NUP43-203ENST00000367404 FAM105AQ9NUU6 356 aa11.03□□□□□ -0.64
NUP43-203ENST00000367404 STK39Q9UEW8 545 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms