RNA–Protein interactions for RNA: ENST00000366894.5

PRKN-203, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 1,157 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-203ENST00000366894 MAEAQ7L5Y9 396 aa17.06■□□□□ 0.32
PRKN-203ENST00000366894 CATSPER4Q7RTX7 472 aa17.06■□□□□ 0.32
PRKN-203ENST00000366894 IFNLR1Q8IU57 520 aaPredicted RBP17.06■□□□□ 0.32
PRKN-203ENST00000366894 KSR1Q8IVT5 923 aa17.06■□□□□ 0.32
PRKN-203ENST00000366894 CEP57L1Q8IYX8 460 aa17.06■□□□□ 0.32
PRKN-203ENST00000366894 ZNF689Q96CS4 500 aaPredicted RBP17.06■□□□□ 0.32
PRKN-203ENST00000366894 PRIMPOLQ96LW4 560 aa17.06■□□□□ 0.32
PRKN-203ENST00000366894 YME1L1Q96TA2 773 aa17.06■□□□□ 0.32
PRKN-203ENST00000366894 PLIN2Q99541 437 aa17.06■□□□□ 0.32
PRKN-203ENST00000366894 EPHX3Q9H6B9 360 aa17.06■□□□□ 0.32
PRKN-203ENST00000366894 LRFN2Q9ULH4 789 aa17.06■□□□□ 0.32
PRKN-203ENST00000366894 COL4A4P53420 1690 aaPredicted RBP17.06■□□□□ 0.32
PRKN-203ENST00000366894 LRRIQ4A6NIV6 560 aa17.05■□□□□ 0.32
PRKN-203ENST00000366894 CSDE1O75534 798 aaKnown RBP17.05■□□□□ 0.32
PRKN-203ENST00000366894 DGKIO75912 1065 aa17.05■□□□□ 0.32
PRKN-203ENST00000366894 LINC00271P0C7V0 271 aa17.05■□□□□ 0.32
PRKN-203ENST00000366894 SLC12A3P55017 1021 aa17.05■□□□□ 0.32
PRKN-203ENST00000366894 SPECC1Q5M775 1068 aa17.05■□□□□ 0.32
PRKN-203ENST00000366894 SLC24A5Q71RS6 500 aa17.05■□□□□ 0.32
PRKN-203ENST00000366894 HACE1Q8IYU2 909 aa17.05■□□□□ 0.32
PRKN-203ENST00000366894 CNNM3Q8NE01 707 aa17.05■□□□□ 0.32
PRKN-203ENST00000366894 CCDC51Q96ER9 411 aa17.05■□□□□ 0.32
PRKN-203ENST00000366894 TGS1Q96RS0 853 aaKnown RBP17.05■□□□□ 0.32
PRKN-203ENST00000366894 ADAM2Q99965 735 aa17.05■□□□□ 0.32
PRKN-203ENST00000366894 NTPCRQ9BSD7 190 aaKnown RBP17.05■□□□□ 0.32
PRKN-203ENST00000366894 C17orf80Q9BSJ5 609 aa17.05■□□□□ 0.32
PRKN-203ENST00000366894 XPNPEP1Q9NQW7 623 aa17.05■□□□□ 0.32
PRKN-203ENST00000366894 RGS18Q9NS28 235 aa17.05■□□□□ 0.32
PRKN-203ENST00000366894 PRMT7Q9NVM4 692 aaPredicted RBP17.05■□□□□ 0.32
PRKN-203ENST00000366894 PCDHB7Q9Y5E2 793 aa17.05■□□□□ 0.32
PRKN-203ENST00000366894 A0A1W2PQ27 194 aa17.04■□□□□ 0.32
PRKN-203ENST00000366894 A0A1W2PQ64 194 aa17.04■□□□□ 0.32
PRKN-203ENST00000366894 A0A1W2PQD8 194 aa17.04■□□□□ 0.32
PRKN-203ENST00000366894 C9IYK1 514 aa17.04■□□□□ 0.32
PRKN-203ENST00000366894 INO80B-WBP1J3KQ70 363 aa17.04■□□□□ 0.32
PRKN-203ENST00000366894 K7ERI5 159 aa17.04■□□□□ 0.32
PRKN-203ENST00000366894 HOXA2O43364 376 aa17.04■□□□□ 0.32
PRKN-203ENST00000366894 TBCAO75347 108 aaKnown RBP17.04■□□□□ 0.32
PRKN-203ENST00000366894 EOMESO95936 686 aa17.04■□□□□ 0.32
PRKN-203ENST00000366894 FGFR4P22455 802 aa17.04■□□□□ 0.32
PRKN-203ENST00000366894 GRIN1Q05586 938 aa17.04■□□□□ 0.32
PRKN-203ENST00000366894 MAPK6Q16659 721 aa17.04■□□□□ 0.32
PRKN-203ENST00000366894 RESP18Q5W5W9 173 aa17.04■□□□□ 0.32
PRKN-203ENST00000366894 KANK3Q6NY19 840 aa17.04■□□□□ 0.32
PRKN-203ENST00000366894 GPBP1Q86WP2 473 aa17.04■□□□□ 0.32
PRKN-203ENST00000366894 NPAS4Q8IUM7 802 aa17.04■□□□□ 0.32
PRKN-203ENST00000366894 TNMDQ9H2S6 317 aa17.04■□□□□ 0.32
PRKN-203ENST00000366894 IFT122Q9HBG6 1241 aa17.04■□□□□ 0.32
PRKN-203ENST00000366894 MTUS1Q9ULD2 1270 aa17.04■□□□□ 0.32
PRKN-203ENST00000366894 KCNH3Q9ULD8 1083 aa17.04■□□□□ 0.32
PRKN-203ENST00000366894 CARNS1A5YM72 827 aa17.03■□□□□ 0.32
PRKN-203ENST00000366894 CCDC169A6NNP5 214 aa17.03■□□□□ 0.32
PRKN-203ENST00000366894 FAM13AO94988 1023 aa17.03■□□□□ 0.32
PRKN-203ENST00000366894 MYL1P05976 194 aa17.03■□□□□ 0.32
PRKN-203ENST00000366894 PLS3P13797 630 aa17.03■□□□□ 0.32
PRKN-203ENST00000366894 GLRA2P23416 452 aa17.03■□□□□ 0.32
PRKN-203ENST00000366894 SARSP49591 514 aaKnown RBP17.03■□□□□ 0.32
PRKN-203ENST00000366894 GATMP50440 423 aa17.03■□□□□ 0.32
PRKN-203ENST00000366894 RAB27AP51159 221 aa17.03■□□□□ 0.32
PRKN-203ENST00000366894 FAM189BP81408 668 aa17.03■□□□□ 0.32
PRKN-203ENST00000366894 DHX8Q14562 1220 aaKnown RBP17.03■□□□□ 0.32
PRKN-203ENST00000366894 TMEM132AQ24JP5 1023 aa17.03■□□□□ 0.32
PRKN-203ENST00000366894 AXDND1Q5T1B0 1012 aaPredicted RBP17.03■□□□□ 0.32
PRKN-203ENST00000366894 SPIRE2Q8WWL2 714 aa17.03■□□□□ 0.32
PRKN-203ENST00000366894 PGBD4Q96DM1 585 aa17.03■□□□□ 0.32
PRKN-203ENST00000366894 TRAIPQ9BWF2 469 aa17.03■□□□□ 0.32
PRKN-203ENST00000366894 TMEM134Q9H6X4 195 aa17.03■□□□□ 0.32
PRKN-203ENST00000366894 ELAC1Q9H777 363 aaKnown RBP17.03■□□□□ 0.32
PRKN-203ENST00000366894 PARVGQ9HBI0 331 aa17.03■□□□□ 0.32
PRKN-203ENST00000366894 KMT5AQ9NQR1 393 aa17.03■□□□□ 0.32
PRKN-203ENST00000366894 SEL1LQ9UBV2 794 aa17.03■□□□□ 0.32
PRKN-203ENST00000366894 HOOK1Q9UJC3 728 aaKnown RBP17.03■□□□□ 0.32
PRKN-203ENST00000366894 MYH15Q9Y2K3 1946 aa17.03■□□□□ 0.32
PRKN-203ENST00000366894 ADGRA3Q8IWK6 1321 aa17.02■□□□□ 0.32
PRKN-203ENST00000366894 POLR2DO15514 142 aaKnown RBP17.02■□□□□ 0.32
PRKN-203ENST00000366894 HIP1RO75146 1068 aa17.02■□□□□ 0.32
PRKN-203ENST00000366894 GAP43P17677 238 aa17.02■□□□□ 0.32
PRKN-203ENST00000366894 STRN3Q13033 797 aa17.02■□□□□ 0.32
PRKN-203ENST00000366894 MCM6Q14566 821 aa17.02■□□□□ 0.32
PRKN-203ENST00000366894 NOTUMQ6P988 496 aa17.02■□□□□ 0.32
PRKN-203ENST00000366894 STXBP4Q6ZWJ1 553 aa17.02■□□□□ 0.32
PRKN-203ENST00000366894 MYCT1Q8N699 235 aa17.02■□□□□ 0.32
PRKN-203ENST00000366894 PDILTQ8N807 584 aa17.02■□□□□ 0.32
PRKN-203ENST00000366894 GDPD5Q8WTR4 605 aa17.02■□□□□ 0.32
PRKN-203ENST00000366894 ADPGKQ9BRR6 497 aa17.02■□□□□ 0.32
PRKN-203ENST00000366894 PANK2Q9BZ23 570 aa17.02■□□□□ 0.32
PRKN-203ENST00000366894 UBN1Q9NPG3 1134 aa17.02■□□□□ 0.32
PRKN-203ENST00000366894 MAPTP10636 758 aaKnown RBP17.01■□□□□ 0.31
PRKN-203ENST00000366894 PEX3P56589 373 aa17.01■□□□□ 0.31
PRKN-203ENST00000366894 CAPSQ13938 189 aa17.01■□□□□ 0.31
PRKN-203ENST00000366894 FAM187BQ17R55 369 aa17.01■□□□□ 0.31
PRKN-203ENST00000366894 EPC2Q52LR7 807 aa17.01■□□□□ 0.31
PRKN-203ENST00000366894 TWF2Q6IBS0 349 aaKnown RBP17.01■□□□□ 0.31
PRKN-203ENST00000366894 SHC4Q6S5L8 630 aa17.01■□□□□ 0.31
PRKN-203ENST00000366894 USP49Q70CQ1 688 aa17.01■□□□□ 0.31
PRKN-203ENST00000366894 KCNK18Q7Z418 384 aa17.01■□□□□ 0.31
PRKN-203ENST00000366894 CCDC65Q8IXS2 484 aa17.01■□□□□ 0.31
PRKN-203ENST00000366894 MRPS27Q92552 414 aaKnown RBP17.01■□□□□ 0.31
PRKN-203ENST00000366894 CCDC47Q96A33 483 aaKnown RBP17.01■□□□□ 0.31
PRKN-203ENST00000366894 MINDY3Q9H8M7 445 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms