RNA–Protein interactions for RNA: ENST00000366747.7

MRPL55-218, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL55, Length 603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-218ENST00000366747 ARF4P18085 180 aaPredicted RBP16.16■□□□□ 0.18
MRPL55-218ENST00000366747 UBXN11Q5T124 520 aa16.16■□□□□ 0.18
MRPL55-218ENST00000366747 PDE12Q6L8Q7 609 aaKnown RBP16.16■□□□□ 0.18
MRPL55-218ENST00000366747 SLC27A1Q6PCB7 646 aa16.16■□□□□ 0.18
MRPL55-218ENST00000366747 KCNK18Q7Z418 384 aa16.16■□□□□ 0.18
MRPL55-218ENST00000366747 APBB1IPQ7Z5R6 666 aaPredicted RBP16.16■□□□□ 0.18
MRPL55-218ENST00000366747 KRI1Q8N9T8 703 aaKnown RBP16.16■□□□□ 0.18
MRPL55-218ENST00000366747 URGCPQ8TCY9 931 aa16.16■□□□□ 0.18
MRPL55-218ENST00000366747 ATXN2LQ8WWM7 1075 aaKnown RBP16.16■□□□□ 0.18
MRPL55-218ENST00000366747 BSNDQ8WZ55 320 aa16.16■□□□□ 0.18
MRPL55-218ENST00000366747 PPP2R3CQ969Q6 453 aa16.16■□□□□ 0.18
MRPL55-218ENST00000366747 USP28Q96RU2 1077 aa16.16■□□□□ 0.18
MRPL55-218ENST00000366747 RUSC1Q9BVN2 902 aa16.16■□□□□ 0.18
MRPL55-218ENST00000366747 TRIM6Q9C030 488 aaPredicted RBP16.16■□□□□ 0.18
MRPL55-218ENST00000366747 CCDC113Q9H0I3 377 aa16.16■□□□□ 0.18
MRPL55-218ENST00000366747 CWH43Q9H720 699 aa16.16■□□□□ 0.18
MRPL55-218ENST00000366747 RSAD1Q9HA92 442 aa16.16■□□□□ 0.18
MRPL55-218ENST00000366747 THEGQ9P2T0 379 aa16.16■□□□□ 0.18
MRPL55-218ENST00000366747 STK17AQ9UEE5 414 aa16.16■□□□□ 0.18
MRPL55-218ENST00000366747 CCDC39Q9UFE4 941 aa16.16■□□□□ 0.18
MRPL55-218ENST00000366747 ODF2LQ9ULJ1 636 aa16.16■□□□□ 0.18
MRPL55-218ENST00000366747 PLAGL2Q9UPG8 496 aa16.16■□□□□ 0.18
MRPL55-218ENST00000366747 LZTS1Q9Y250 596 aa16.16■□□□□ 0.18
MRPL55-218ENST00000366747 MYO9BQ13459 2157 aa16.16■□□□□ 0.18
MRPL55-218ENST00000366747 H0YCG3 227 aa16.15■□□□□ 0.18
MRPL55-218ENST00000366747 INPPL1O15357 1258 aa16.15■□□□□ 0.18
MRPL55-218ENST00000366747 HIP1RO75146 1068 aa16.15■□□□□ 0.18
MRPL55-218ENST00000366747 PPP6R2O75170 966 aa16.15■□□□□ 0.18
MRPL55-218ENST00000366747 PRKCBP05771 671 aa16.15■□□□□ 0.18
MRPL55-218ENST00000366747 PLCB3Q01970 1234 aa16.15■□□□□ 0.18
MRPL55-218ENST00000366747 PRPF4BQ13523 1007 aaKnown RBP16.15■□□□□ 0.18
MRPL55-218ENST00000366747 BECN1Q14457 450 aa16.15■□□□□ 0.18
MRPL55-218ENST00000366747 AAK1Q2M2I8 961 aa16.15■□□□□ 0.18
MRPL55-218ENST00000366747 NOMO2Q5JPE7 1267 aa16.15■□□□□ 0.18
MRPL55-218ENST00000366747 MICALL1Q8N3F8 863 aa16.15■□□□□ 0.18
MRPL55-218ENST00000366747 KLHL23Q8NBE8 558 aa16.15■□□□□ 0.18
MRPL55-218ENST00000366747 COLGALT1Q8NBJ5 622 aa16.15■□□□□ 0.18
MRPL55-218ENST00000366747 HELQQ8TDG4 1101 aa16.15■□□□□ 0.18
MRPL55-218ENST00000366747 SPIRE2Q8WWL2 714 aa16.15■□□□□ 0.18
MRPL55-218ENST00000366747 KCNN1Q92952 543 aa16.15■□□□□ 0.18
MRPL55-218ENST00000366747 ZNF558Q96NG5 402 aa16.15■□□□□ 0.18
MRPL55-218ENST00000366747 ADPGKQ9BRR6 497 aa16.15■□□□□ 0.18
MRPL55-218ENST00000366747 NTPCRQ9BSD7 190 aaKnown RBP16.15■□□□□ 0.18
MRPL55-218ENST00000366747 NSUN3Q9H649 340 aaKnown RBP16.15■□□□□ 0.18
MRPL55-218ENST00000366747 TMEM134Q9H6X4 195 aa16.15■□□□□ 0.18
MRPL55-218ENST00000366747 STK39Q9UEW8 545 aa16.15■□□□□ 0.18
MRPL55-218ENST00000366747 GIT1Q9Y2X7 761 aa16.15■□□□□ 0.18
MRPL55-218ENST00000366747 IPPQ9Y573 584 aa16.15■□□□□ 0.18
MRPL55-218ENST00000366747 FSD2A1L4K1 749 aa16.14■□□□□ 0.17
MRPL55-218ENST00000366747 OFD1O75665 1012 aa16.14■□□□□ 0.17
MRPL55-218ENST00000366747 F13A1P00488 732 aa16.14■□□□□ 0.17
MRPL55-218ENST00000366747 SSBP05455 408 aaKnown RBP eCLIP16.14■□□□□ 0.17
MRPL55-218ENST00000366747 ITGB1P05556 798 aa16.14■□□□□ 0.17
MRPL55-218ENST00000366747 ITGA4P13612 1032 aa16.14■□□□□ 0.17
MRPL55-218ENST00000366747 PLS3P13797 630 aa16.14■□□□□ 0.17
MRPL55-218ENST00000366747 MARCKSP29966 332 aaPredicted RBP16.14■□□□□ 0.17
MRPL55-218ENST00000366747 ABCD1P33897 745 aa16.14■□□□□ 0.17
MRPL55-218ENST00000366747 NPTX2P47972 431 aa16.14■□□□□ 0.17
MRPL55-218ENST00000366747 SMTNP53814 917 aa16.14■□□□□ 0.17
MRPL55-218ENST00000366747 GRIN1Q05586 938 aa16.14■□□□□ 0.17
MRPL55-218ENST00000366747 MAPK7Q13164 816 aa16.14■□□□□ 0.17
MRPL55-218ENST00000366747 STK38Q15208 465 aa16.14■□□□□ 0.17
MRPL55-218ENST00000366747 FAM173BQ6P4H8 233 aa16.14■□□□□ 0.17
MRPL55-218ENST00000366747 KCNT2Q6UVM3 1135 aa16.14■□□□□ 0.17
MRPL55-218ENST00000366747 AGMOQ6ZNB7 445 aa16.14■□□□□ 0.17
MRPL55-218ENST00000366747 DAW1Q8N136 415 aa16.14■□□□□ 0.17
MRPL55-218ENST00000366747 LINC00301Q8NCQ3 95 aa16.14■□□□□ 0.17
MRPL55-218ENST00000366747 SPPL3Q8TCT6 385 aa16.14■□□□□ 0.17
MRPL55-218ENST00000366747 RAD54LQ92698 747 aa16.14■□□□□ 0.17
MRPL55-218ENST00000366747 LARSQ9P2J5 1176 aaKnown RBP16.14■□□□□ 0.17
MRPL55-218ENST00000366747 ARHGAP28Q9P2N2 729 aa16.14■□□□□ 0.17
MRPL55-218ENST00000366747 PUF60Q9UHX1 559 aaKnown RBP16.14■□□□□ 0.17
MRPL55-218ENST00000366747 COL6A3P12111 3177 aa16.13■□□□□ 0.17
MRPL55-218ENST00000366747 K7ERI5 159 aa16.13■□□□□ 0.17
MRPL55-218ENST00000366747 GRM6O15303 877 aa16.13■□□□□ 0.17
MRPL55-218ENST00000366747 FGF18O76093 207 aa16.13■□□□□ 0.17
MRPL55-218ENST00000366747 PLCG1P19174 1290 aa16.13■□□□□ 0.17
MRPL55-218ENST00000366747 ALDH7A1P49419 539 aaKnown RBP16.13■□□□□ 0.17
MRPL55-218ENST00000366747 PEX3P56589 373 aa16.13■□□□□ 0.17
MRPL55-218ENST00000366747 KRT17Q04695 432 aa16.13■□□□□ 0.17
MRPL55-218ENST00000366747 KARSQ15046 597 aaKnown RBP16.13■□□□□ 0.17
MRPL55-218ENST00000366747 SKIV2LQ15477 1246 aaKnown RBP16.13■□□□□ 0.17
MRPL55-218ENST00000366747 CCDC85BQ15834 202 aaPredicted RBP16.13■□□□□ 0.17
MRPL55-218ENST00000366747 TMEM132AQ24JP5 1023 aa16.13■□□□□ 0.17
MRPL55-218ENST00000366747 DCAF4L1Q3SXM0 396 aa16.13■□□□□ 0.17
MRPL55-218ENST00000366747 CCDC73Q6ZRK6 1079 aa16.13■□□□□ 0.17
MRPL55-218ENST00000366747 LRRC55Q6ZSA7 311 aa16.13■□□□□ 0.17
MRPL55-218ENST00000366747 THNSL1Q8IYQ7 743 aa16.13■□□□□ 0.17
MRPL55-218ENST00000366747 KCNG4Q8TDN1 519 aa16.13■□□□□ 0.17
MRPL55-218ENST00000366747 PPM1EQ8WY54 764 aa16.13■□□□□ 0.17
MRPL55-218ENST00000366747 LARP4BQ92615 738 aaKnown RBP16.13■□□□□ 0.17
MRPL55-218ENST00000366747 CPB2Q96IY4 423 aa16.13■□□□□ 0.17
MRPL55-218ENST00000366747 KMT5AQ9NQR1 393 aa16.13■□□□□ 0.17
MRPL55-218ENST00000366747 BLOC1S4Q9NUP1 217 aa16.13■□□□□ 0.17
MRPL55-218ENST00000366747 TBC1D13Q9NVG8 400 aa16.13■□□□□ 0.17
MRPL55-218ENST00000366747 SPG21Q9NZD8 308 aa16.13■□□□□ 0.17
MRPL55-218ENST00000366747 CFAP45Q9UL16 551 aa16.13■□□□□ 0.17
MRPL55-218ENST00000366747 FNDC1Q4ZHG4 1894 aaPredicted RBP16.12■□□□□ 0.17
MRPL55-218ENST00000366747 NLRC5Q86WI3 1866 aa16.12■□□□□ 0.17
MRPL55-218ENST00000366747 CCDC169A6NNP5 214 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms