RNA–Protein interactions for RNA: ENST00000366442.2

SHC1-201, Transcript of SHC adaptor protein 1, humanhuman

TSL 3

Gene SHC1, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-201ENST00000366442 NCLP19338 710 aaKnown RBP26.22■■□□□ 1.79
SHC1-201ENST00000366442 SMAD4Q13485 552 aaKnown RBP26.22■■□□□ 1.79
SHC1-201ENST00000366442 SMAD2Q15796 467 aaKnown RBP26.22■■□□□ 1.79
SHC1-201ENST00000366442 DUSP6Q16828 381 aa26.22■■□□□ 1.79
SHC1-201ENST00000366442 LONRF3Q496Y0 759 aa26.22■■□□□ 1.79
SHC1-201ENST00000366442 AGMOQ6ZNB7 445 aa26.22■■□□□ 1.79
SHC1-201ENST00000366442 RBM23Q86U06 439 aaKnown RBP26.22■■□□□ 1.79
SHC1-201ENST00000366442 MSLNLQ96KJ4 702 aa26.22■■□□□ 1.79
SHC1-201ENST00000366442 TCF25Q9BQ70 676 aa26.22■■□□□ 1.79
SHC1-201ENST00000366442 CLEC1BQ9P126 229 aa26.22■■□□□ 1.79
SHC1-201ENST00000366442 CD207Q9UJ71 328 aa26.22■■□□□ 1.79
SHC1-201ENST00000366442 PCDHB6Q9Y5E3 794 aa26.22■■□□□ 1.79
SHC1-201ENST00000366442 PTGDRQ13258 359 aa26.21■■□□□ 1.79
SHC1-201ENST00000366442 RAB34Q9BZG1 259 aa26.21■■□□□ 1.79
SHC1-201ENST00000366442 RSAD1Q9HA92 442 aa26.21■■□□□ 1.79
SHC1-201ENST00000366442 UBN1Q9NPG3 1134 aa26.21■■□□□ 1.79
SHC1-201ENST00000366442 ENTPD7Q9NQZ7 604 aa26.21■■□□□ 1.79
SHC1-201ENST00000366442 LRWD1Q9UFC0 647 aa26.21■■□□□ 1.79
SHC1-201ENST00000366442 INPP5FQ9Y2H2 1132 aa26.21■■□□□ 1.79
SHC1-201ENST00000366442 MBTPS2O43462 519 aa26.2■■□□□ 1.78
SHC1-201ENST00000366442 ZC3H11AO75152 810 aaKnown RBP eCLIP26.2■■□□□ 1.78
SHC1-201ENST00000366442 EYA4O95677 639 aa26.2■■□□□ 1.78
SHC1-201ENST00000366442 GLP2RO95838 553 aa26.2■■□□□ 1.78
SHC1-201ENST00000366442 GJB2P29033 226 aa26.2■■□□□ 1.78
SHC1-201ENST00000366442 COASYQ13057 564 aa26.2■■□□□ 1.78
SHC1-201ENST00000366442 AMHR2Q16671 573 aa26.2■■□□□ 1.78
SHC1-201ENST00000366442 PLPP4Q5VZY2 271 aa26.2■■□□□ 1.78
SHC1-201ENST00000366442 GJD3Q8N144 294 aa26.2■■□□□ 1.78
SHC1-201ENST00000366442 IGSF22Q8N9C0 903 aa26.2■■□□□ 1.78
SHC1-201ENST00000366442 URGCPQ8TCY9 931 aa26.2■■□□□ 1.78
SHC1-201ENST00000366442 CSRNP2Q9H175 543 aa26.2■■□□□ 1.78
SHC1-201ENST00000366442 NRDE2Q9H7Z3 1164 aa26.2■■□□□ 1.78
SHC1-201ENST00000366442 CD320Q9NPF0 282 aa26.2■■□□□ 1.78
SHC1-201ENST00000366442 KANSL3Q9P2N6 904 aa26.2■■□□□ 1.78
SHC1-201ENST00000366442 ARHGEF35A5YM69 484 aa26.19■■□□□ 1.78
SHC1-201ENST00000366442 PER2O15055 1255 aa26.19■■□□□ 1.78
SHC1-201ENST00000366442 CYP11B2P19099 503 aa26.19■■□□□ 1.78
SHC1-201ENST00000366442 CCT6AP40227 531 aaKnown RBP26.19■■□□□ 1.78
SHC1-201ENST00000366442 PRPHP41219 470 aa26.19■■□□□ 1.78
SHC1-201ENST00000366442 RNASELQ05823 741 aaKnown RBP26.19■■□□□ 1.78
SHC1-201ENST00000366442 CLUL1Q15846 466 aa26.19■■□□□ 1.78
SHC1-201ENST00000366442 RILPL1Q5EBL4 403 aa26.19■■□□□ 1.78
SHC1-201ENST00000366442 PADI6Q6TGC4 694 aa26.19■■□□□ 1.78
SHC1-201ENST00000366442 TMC7Q7Z402 723 aa26.19■■□□□ 1.78
SHC1-201ENST00000366442 SMG8Q8ND04 991 aaKnown RBP26.19■■□□□ 1.78
SHC1-201ENST00000366442 TMEM169Q96HH4 297 aa26.19■■□□□ 1.78
SHC1-201ENST00000366442 GPRC5CQ9NQ84 441 aa26.19■■□□□ 1.78
SHC1-201ENST00000366442 EIF4ENIF1Q9NRA8 985 aaKnown RBP26.19■■□□□ 1.78
SHC1-201ENST00000366442 C5orf42Q9H799 3197 aa26.18■■□□□ 1.78
SHC1-201ENST00000366442 GALTP07902 379 aa26.18■■□□□ 1.78
SHC1-201ENST00000366442 ARF4P18085 180 aaPredicted RBP26.18■■□□□ 1.78
SHC1-201ENST00000366442 ZP2Q05996 745 aa26.18■■□□□ 1.78
SHC1-201ENST00000366442 CDCA2Q69YH5 1023 aaPredicted RBP26.18■■□□□ 1.78
SHC1-201ENST00000366442 MCTP1Q6DN14 999 aa26.18■■□□□ 1.78
SHC1-201ENST00000366442 TMEM184AQ6ZMB5 413 aa26.18■■□□□ 1.78
SHC1-201ENST00000366442 MAEAQ7L5Y9 396 aa26.18■■□□□ 1.78
SHC1-201ENST00000366442 ADHFE1Q8IWW8 467 aa26.18■■□□□ 1.78
SHC1-201ENST00000366442 SMRP1Q8NCR6 262 aa26.18■■□□□ 1.78
SHC1-201ENST00000366442 IGSF21Q96ID5 467 aa26.18■■□□□ 1.78
SHC1-201ENST00000366442 CPB2Q96IY4 423 aa26.18■■□□□ 1.78
SHC1-201ENST00000366442 C1QTNF1Q9BXJ1 281 aa26.18■■□□□ 1.78
SHC1-201ENST00000366442 IPPQ9Y573 584 aa26.18■■□□□ 1.78
SHC1-201ENST00000366442 HIDE1A8MVS5 230 aa26.17■■□□□ 1.78
SHC1-201ENST00000366442 NT5C1B-RDH14C9J2C7 533 aa26.17■■□□□ 1.78
SHC1-201ENST00000366442 H3BQV1 296 aa26.17■■□□□ 1.78
SHC1-201ENST00000366442 INPPL1O15357 1258 aa26.17■■□□□ 1.78
SHC1-201ENST00000366442 ITGA4P13612 1032 aa26.17■■□□□ 1.78
SHC1-201ENST00000366442 KCNC3Q14003 757 aa26.17■■□□□ 1.78
SHC1-201ENST00000366442 SMC1AQ14683 1233 aaKnown RBP26.17■■□□□ 1.78
SHC1-201ENST00000366442 BMS1Q14692 1282 aaKnown RBP26.17■■□□□ 1.78
SHC1-201ENST00000366442 ECM1Q16610 540 aa26.17■■□□□ 1.78
SHC1-201ENST00000366442 PPP4R3CPQ6ZMV5 832 aa26.17■■□□□ 1.78
SHC1-201ENST00000366442 PRIMPOLQ96LW4 560 aa26.17■■□□□ 1.78
SHC1-201ENST00000366442 EIF2AQ9BY44 585 aaKnown RBP26.17■■□□□ 1.78
SHC1-201ENST00000366442 BARX2Q9UMQ3 279 aaPredicted RBP26.17■■□□□ 1.78
SHC1-201ENST00000366442 ZSCAN21Q9Y5A6 473 aaPredicted RBP26.17■■□□□ 1.78
SHC1-201ENST00000366442 LRRIQ4A6NIV6 560 aa26.16■■□□□ 1.78
SHC1-201ENST00000366442 C19orf67A6NJJ6 358 aa26.16■■□□□ 1.78
SHC1-201ENST00000366442 SRGAP2BP0DMP2 458 aa26.16■■□□□ 1.78
SHC1-201ENST00000366442 SSTR3P32745 418 aaPredicted RBP26.16■■□□□ 1.78
SHC1-201ENST00000366442 DDX53Q86TM3 631 aaKnown RBP26.16■■□□□ 1.78
SHC1-201ENST00000366442 ZBTB8OSQ8IWT0 167 aa26.16■■□□□ 1.78
SHC1-201ENST00000366442 MRPL43Q8N983 215 aaKnown RBP26.16■■□□□ 1.78
SHC1-201ENST00000366442 VN1R2Q8NFZ6 395 aa26.16■■□□□ 1.78
SHC1-201ENST00000366442 TMEM175Q9BSA9 504 aa26.16■■□□□ 1.78
SHC1-201ENST00000366442 C2orf40Q9H1Z8 148 aa26.16■■□□□ 1.78
SHC1-201ENST00000366442 PRMT7Q9NVM4 692 aaPredicted RBP26.16■■□□□ 1.78
SHC1-201ENST00000366442 STK39Q9UEW8 545 aa26.16■■□□□ 1.78
SHC1-201ENST00000366442 SMC3Q9UQE7 1217 aa26.16■■□□□ 1.78
SHC1-201ENST00000366442 A0A1B0GUA9 196 aa26.15■■□□□ 1.78
SHC1-201ENST00000366442 FAM187BQ17R55 369 aa26.15■■□□□ 1.78
SHC1-201ENST00000366442 SLC27A1Q6PCB7 646 aa26.15■■□□□ 1.78
SHC1-201ENST00000366442 DTHD1Q6ZMT9 781 aa26.15■■□□□ 1.78
SHC1-201ENST00000366442 TMEM173Q86WV6 379 aaPredicted RBP26.15■■□□□ 1.78
SHC1-201ENST00000366442 ZNF280BQ86YH2 543 aa26.15■■□□□ 1.78
SHC1-201ENST00000366442 HACE1Q8IYU2 909 aa26.15■■□□□ 1.78
SHC1-201ENST00000366442 SNX29Q8TEQ0 813 aa26.15■■□□□ 1.78
SHC1-201ENST00000366442 POP1Q99575 1024 aaKnown RBP26.15■■□□□ 1.78
SHC1-201ENST00000366442 GBP3Q9H0R5 595 aa26.15■■□□□ 1.78
SHC1-201ENST00000366442 BHMT2Q9H2M3 363 aa26.15■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms