RNA–Protein interactions for RNA: ENST00000365563.1

RNU6-54P-201, Transcript of RNA, U6 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU6-54P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-54P-201ENST00000365563 MCM8Q9UJA3 840 aa0.69□□□□□ -2.3
RNU6-54P-201ENST00000365563 DENND2AQ9ULE3 1009 aa0.69□□□□□ -2.3
RNU6-54P-201ENST00000365563 WDR3Q9UNX4 943 aaKnown RBP eCLIP0.69□□□□□ -2.3
RNU6-54P-201ENST00000365563 PCDHB1Q9Y5F3 818 aa0.69□□□□□ -2.3
RNU6-54P-201ENST00000365563 FPGT-TNNI3KV9GXZ4 949 aa0.69□□□□□ -2.3
RNU6-54P-201ENST00000365563 IGKV6D-41A0A0C4DH26 115 aa0.68□□□□□ -2.3
RNU6-54P-201ENST00000365563 ARID3CA6NKF2 412 aa0.68□□□□□ -2.3
RNU6-54P-201ENST00000365563 MARCH11A6NNE9 402 aa0.68□□□□□ -2.3
RNU6-54P-201ENST00000365563 PRR5-ARHGAP8B1AHC4 643 aa0.68□□□□□ -2.3
RNU6-54P-201ENST00000365563 ACOT7O00154 380 aa0.68□□□□□ -2.3
RNU6-54P-201ENST00000365563 DAPK3O43293 454 aa0.68□□□□□ -2.3
RNU6-54P-201ENST00000365563 MTSS1O43312 755 aa0.68□□□□□ -2.3
RNU6-54P-201ENST00000365563 DNAJC6O75061 913 aa0.68□□□□□ -2.3
RNU6-54P-201ENST00000365563 TOX4O94842 621 aa0.68□□□□□ -2.3
RNU6-54P-201ENST00000365563 SCG5P05408 212 aa0.68□□□□□ -2.3
RNU6-54P-201ENST00000365563 TMEM191BP0C7N4 346 aa0.68□□□□□ -2.3
RNU6-54P-201ENST00000365563 ZSCAN20P17040 1043 aaPredicted RBP0.68□□□□□ -2.3
RNU6-54P-201ENST00000365563 PTPN1P18031 435 aaKnown RBP0.68□□□□□ -2.3
RNU6-54P-201ENST00000365563 GRK2P25098 689 aa0.68□□□□□ -2.3
RNU6-54P-201ENST00000365563 MGAT1P26572 445 aa0.68□□□□□ -2.3
RNU6-54P-201ENST00000365563 APEX1P27695 318 aaKnown RBP0.68□□□□□ -2.3
RNU6-54P-201ENST00000365563 GRK3P35626 688 aa0.68□□□□□ -2.3
RNU6-54P-201ENST00000365563 ECI1P42126 302 aa0.68□□□□□ -2.3
RNU6-54P-201ENST00000365563 KCNJ6P48051 423 aa0.68□□□□□ -2.3
RNU6-54P-201ENST00000365563 HTR6P50406 440 aa0.68□□□□□ -2.3
RNU6-54P-201ENST00000365563 WNT3AP56704 352 aa0.68□□□□□ -2.3
RNU6-54P-201ENST00000365563 RNASE9P60153 205 aaKnown RBP0.68□□□□□ -2.3
RNU6-54P-201ENST00000365563 NANOS2P60321 138 aaKnown RBP0.68□□□□□ -2.3
RNU6-54P-201ENST00000365563 HERVK_113P62684 666 aa0.68□□□□□ -2.3
RNU6-54P-201ENST00000365563 RESTQ13127 1097 aa0.68□□□□□ -2.3
RNU6-54P-201ENST00000365563 PSMD2Q13200 908 aa0.68□□□□□ -2.3
RNU6-54P-201ENST00000365563 RABEP1Q15276 862 aa0.68□□□□□ -2.3
RNU6-54P-201ENST00000365563 ZYXQ15942 572 aaKnown RBP0.68□□□□□ -2.3
RNU6-54P-201ENST00000365563 KIZQ2M2Z5 673 aa0.68□□□□□ -2.3
RNU6-54P-201ENST00000365563 TSTD2Q5T7W7 516 aa0.68□□□□□ -2.3
RNU6-54P-201ENST00000365563 FBXW10Q5XX13 1052 aa0.68□□□□□ -2.3
RNU6-54P-201ENST00000365563 DOK3Q7L591 496 aa0.68□□□□□ -2.3
RNU6-54P-201ENST00000365563 ZBTB38Q8NAP3 1195 aaPredicted RBP0.68□□□□□ -2.3
RNU6-54P-201ENST00000365563 PLA2G15Q8NCC3 412 aa0.68□□□□□ -2.3
RNU6-54P-201ENST00000365563 ZNF296Q8WUU4 475 aaPredicted RBP0.68□□□□□ -2.3
RNU6-54P-201ENST00000365563 CASKIN2Q8WXE0 1202 aa0.68□□□□□ -2.3
RNU6-54P-201ENST00000365563 PPP1R14AQ96A00 147 aa0.68□□□□□ -2.3
RNU6-54P-201ENST00000365563 APBA2Q99767 749 aa0.68□□□□□ -2.3
RNU6-54P-201ENST00000365563 ADAM2Q99965 735 aa0.68□□□□□ -2.3
RNU6-54P-201ENST00000365563 AIFM2Q9BRQ8 373 aa0.68□□□□□ -2.3
RNU6-54P-201ENST00000365563 JAM3Q9BX67 310 aa0.68□□□□□ -2.3
RNU6-54P-201ENST00000365563 HAPLN2Q9GZV7 340 aa0.68□□□□□ -2.3
RNU6-54P-201ENST00000365563 IL17RBQ9NRM6 502 aa0.68□□□□□ -2.3
RNU6-54P-201ENST00000365563 GJB4Q9NTQ9 266 aa0.68□□□□□ -2.3
RNU6-54P-201ENST00000365563 RIC8BQ9NVN3 520 aa0.68□□□□□ -2.3
RNU6-54P-201ENST00000365563 UBP1Q9NZI7 540 aa0.68□□□□□ -2.3
RNU6-54P-201ENST00000365563 TELO2Q9Y4R8 837 aa0.68□□□□□ -2.3
RNU6-54P-201ENST00000365563 NOX1Q9Y5S8 564 aa0.68□□□□□ -2.3
RNU6-54P-201ENST00000365563 ANTXRLA6NF34 631 aa0.67□□□□□ -2.3
RNU6-54P-201ENST00000365563 PRAMEF25A6NGN4 478 aa0.67□□□□□ -2.3
RNU6-54P-201ENST00000365563 LACTBL1A8MY62 500 aa0.67□□□□□ -2.3
RNU6-54P-201ENST00000365563 PPP6CO00743 305 aa0.67□□□□□ -2.3
RNU6-54P-201ENST00000365563 WNT9AO14904 365 aa0.67□□□□□ -2.3
RNU6-54P-201ENST00000365563 PEX1O43933 1283 aa0.67□□□□□ -2.3
RNU6-54P-201ENST00000365563 SEC24DO94855 1032 aaPredicted RBP0.67□□□□□ -2.3
RNU6-54P-201ENST00000365563 LCP1P13796 627 aa0.67□□□□□ -2.3
RNU6-54P-201ENST00000365563 HSP90B1P14625 803 aaKnown RBP0.67□□□□□ -2.3
RNU6-54P-201ENST00000365563 MC4RP32245 332 aa0.67□□□□□ -2.3
RNU6-54P-201ENST00000365563 NHLH2Q02577 135 aa0.67□□□□□ -2.3
RNU6-54P-201ENST00000365563 LRRC41Q15345 812 aa0.67□□□□□ -2.3
RNU6-54P-201ENST00000365563 ASIC2Q16515 512 aa0.67□□□□□ -2.3
RNU6-54P-201ENST00000365563 FAM153CQ494X1 144 aa0.67□□□□□ -2.3
RNU6-54P-201ENST00000365563 FIGNQ5HY92 759 aa0.67□□□□□ -2.3
RNU6-54P-201ENST00000365563 HABP4Q5JVS0 413 aaKnown RBP0.67□□□□□ -2.3
RNU6-54P-201ENST00000365563 UBAP2Q5T6F2 1119 aaKnown RBP0.67□□□□□ -2.3
RNU6-54P-201ENST00000365563 SLC18B1Q6NT16 456 aa0.67□□□□□ -2.3
RNU6-54P-201ENST00000365563 C9orf47Q6ZRZ4 202 aa0.67□□□□□ -2.3
RNU6-54P-201ENST00000365563 ERMP1Q7Z2K6 904 aa0.67□□□□□ -2.3
RNU6-54P-201ENST00000365563 ZNF329Q86UD4 541 aa0.67□□□□□ -2.3
RNU6-54P-201ENST00000365563 CUZD1Q86UP6 607 aa0.67□□□□□ -2.3
RNU6-54P-201ENST00000365563 THNSL2Q86YJ6 484 aa0.67□□□□□ -2.3
RNU6-54P-201ENST00000365563 RFX6Q8HWS3 928 aa0.67□□□□□ -2.3
RNU6-54P-201ENST00000365563 RBBP8NLQ8NC74 664 aaPredicted RBP0.67□□□□□ -2.3
RNU6-54P-201ENST00000365563 REPS2Q8NFH8 660 aa0.67□□□□□ -2.3
RNU6-54P-201ENST00000365563 PRSS3P2Q8NHM4 247 aa0.67□□□□□ -2.3
RNU6-54P-201ENST00000365563 PIGOQ8TEQ8 1089 aa0.67□□□□□ -2.3
RNU6-54P-201ENST00000365563 DUSP9Q99956 384 aaKnown RBP0.67□□□□□ -2.3
RNU6-54P-201ENST00000365563 NT5C1AQ9BXI3 368 aa0.67□□□□□ -2.3
RNU6-54P-201ENST00000365563 CPEB1Q9BZB8 566 aaKnown RBP0.67□□□□□ -2.3
RNU6-54P-201ENST00000365563 SPRTNQ9H040 489 aaPredicted RBP0.67□□□□□ -2.3
RNU6-54P-201ENST00000365563 SMURF1Q9HCE7 757 aa0.67□□□□□ -2.3
RNU6-54P-201ENST00000365563 GPR27Q9NS67 375 aa0.67□□□□□ -2.3
RNU6-54P-201ENST00000365563 APEX2Q9UBZ4 518 aa0.67□□□□□ -2.3
RNU6-54P-201ENST00000365563 ATP23Q9Y6H3 246 aa0.67□□□□□ -2.3
RNU6-54P-201ENST00000365563 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP0.66□□□□□ -2.3
RNU6-54P-201ENST00000365563 A0A1W2PNU3 283 aaPredicted RBP0.66□□□□□ -2.3
RNU6-54P-201ENST00000365563 C2orf78A6NCI8 922 aa0.66□□□□□ -2.3
RNU6-54P-201ENST00000365563 CD8B2A6NJW9 211 aa0.66□□□□□ -2.3
RNU6-54P-201ENST00000365563 C4orf47A7E2U8 309 aa0.66□□□□□ -2.3
RNU6-54P-201ENST00000365563 GCOM1H8Y6P7 765 aaPredicted RBP0.66□□□□□ -2.3
RNU6-54P-201ENST00000365563 GTPBP1O00178 669 aaKnown RBP0.66□□□□□ -2.3
RNU6-54P-201ENST00000365563 HOXA3O43365 443 aaPredicted RBP0.66□□□□□ -2.3
RNU6-54P-201ENST00000365563 GRID2O43424 1007 aa0.66□□□□□ -2.3
RNU6-54P-201ENST00000365563 CAMTA2O94983 1202 aa0.66□□□□□ -2.3
RNU6-54P-201ENST00000365563 LATS1O95835 1130 aa0.66□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms