RNA–Protein interactions for RNA: ENST00000361901.6

CALD1-202, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,114 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-202ENST00000361901 RIN2Q8WYP3 895 aaPredicted RBP9.91□□□□□ -0.82
CALD1-202ENST00000361901 FAXDC2Q96IV6 333 aa9.91□□□□□ -0.82
CALD1-202ENST00000361901 ASCC2Q9H1I8 757 aaPredicted RBP9.91□□□□□ -0.82
CALD1-202ENST00000361901 RRAGCQ9HB90 399 aa9.91□□□□□ -0.82
CALD1-202ENST00000361901 MOCS3O95396 460 aa9.9□□□□□ -0.82
CALD1-202ENST00000361901 PCK1P35558 622 aa9.9□□□□□ -0.82
CALD1-202ENST00000361901 ACTR2P61160 394 aa9.9□□□□□ -0.82
CALD1-202ENST00000361901 ERVK-24P63145 666 aa9.9□□□□□ -0.82
CALD1-202ENST00000361901 CCNA1P78396 465 aa9.9□□□□□ -0.82
CALD1-202ENST00000361901 MRPS9P82933 396 aaKnown RBP9.9□□□□□ -0.82
CALD1-202ENST00000361901 PRKCEQ02156 737 aa9.9□□□□□ -0.82
CALD1-202ENST00000361901 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.9□□□□□ -0.82
CALD1-202ENST00000361901 SPATS2Q86XZ4 545 aaKnown RBP9.9□□□□□ -0.82
CALD1-202ENST00000361901 ZNF483Q8TF39 744 aaPredicted RBP9.9□□□□□ -0.82
CALD1-202ENST00000361901 FAM213AQ9BRX8 229 aa9.9□□□□□ -0.82
CALD1-202ENST00000361901 SPATC1LQ9H0A9 340 aa9.9□□□□□ -0.82
CALD1-202ENST00000361901 MCM8Q9UJA3 840 aa9.9□□□□□ -0.82
CALD1-202ENST00000361901 SPDYE16A6NNV3 312 aaPredicted RBP9.9□□□□□ -0.82
CALD1-202ENST00000361901 TXNP10599 105 aaKnown RBP9.9□□□□□ -0.82
CALD1-202ENST00000361901 PECAM1P16284 738 aaPredicted RBP9.9□□□□□ -0.82
CALD1-202ENST00000361901 ITGB3BPQ13352 177 aaPredicted RBP9.9□□□□□ -0.82
CALD1-202ENST00000361901 PREPLQ4J6C6 727 aaPredicted RBP9.9□□□□□ -0.82
CALD1-202ENST00000361901 SEZ6Q53EL9 994 aa9.9□□□□□ -0.82
CALD1-202ENST00000361901 PCNX4Q63HM2 1172 aa9.9□□□□□ -0.82
CALD1-202ENST00000361901 CATSPERGQ6ZRH7 1159 aa9.9□□□□□ -0.82
CALD1-202ENST00000361901 SLC5A5Q92911 643 aa9.9□□□□□ -0.82
CALD1-202ENST00000361901 SPATA33Q96N06 139 aa9.9□□□□□ -0.82
CALD1-202ENST00000361901 FAM167BQ9BTA0 163 aa9.9□□□□□ -0.82
CALD1-202ENST00000361901 MOV10L1Q9BXT6 1211 aaKnown RBP9.9□□□□□ -0.82
CALD1-202ENST00000361901 IMPG2Q9BZV3 1241 aa9.9□□□□□ -0.82
CALD1-202ENST00000361901 POLR3FQ9H1D9 316 aaPredicted RBP9.9□□□□□ -0.82
CALD1-202ENST00000361901 HDAC6Q9UBN7 1215 aa9.9□□□□□ -0.82
CALD1-202ENST00000361901 FAM184BQ9ULE4 1060 aa9.9□□□□□ -0.82
CALD1-202ENST00000361901 DOCK2Q92608 1830 aa9.9□□□□□ -0.82
CALD1-202ENST00000361901 CYP3A7-CYP3A51PA0A087WV96 503 aa9.9□□□□□ -0.83
CALD1-202ENST00000361901 LRRD1A4D1F6 860 aa9.9□□□□□ -0.83
CALD1-202ENST00000361901 E7EVH7 732 aa9.9□□□□□ -0.83
CALD1-202ENST00000361901 PIK3CDO00329 1044 aa9.9□□□□□ -0.83
CALD1-202ENST00000361901 AKAP3O75969 853 aa9.9□□□□□ -0.83
CALD1-202ENST00000361901 MYCP01106 439 aaPredicted RBP9.9□□□□□ -0.83
CALD1-202ENST00000361901 MYBL1P10243 752 aa9.9□□□□□ -0.83
CALD1-202ENST00000361901 CYP3A7P24462 503 aa9.9□□□□□ -0.83
CALD1-202ENST00000361901 SFNP31947 248 aa9.9□□□□□ -0.83
CALD1-202ENST00000361901 CIITAP33076 1130 aa9.9□□□□□ -0.83
CALD1-202ENST00000361901 LY6KQ17RY6 165 aa9.9□□□□□ -0.83
CALD1-202ENST00000361901 TRIM50Q86XT4 487 aa9.9□□□□□ -0.83
CALD1-202ENST00000361901 FBXO16Q8IX29 292 aaPredicted RBP9.9□□□□□ -0.83
CALD1-202ENST00000361901 LRRC71Q8N4P6 559 aa9.9□□□□□ -0.83
CALD1-202ENST00000361901 C3orf20Q8ND61 904 aa9.9□□□□□ -0.83
CALD1-202ENST00000361901 PPP1R12CQ9BZL4 782 aa9.9□□□□□ -0.83
CALD1-202ENST00000361901 ABT1Q9ULW3 272 aaKnown RBP9.9□□□□□ -0.83
CALD1-202ENST00000361901 CAPN11Q9UMQ6 739 aa9.9□□□□□ -0.83
CALD1-202ENST00000361901 AKT3Q9Y243 479 aa9.9□□□□□ -0.83
CALD1-202ENST00000361901 SCN9AQ15858 1988 aa9.9□□□□□ -0.83
CALD1-202ENST00000361901 EME2A4GXA9 379 aaPredicted RBP9.89□□□□□ -0.83
CALD1-202ENST00000361901 MEFVO15553 781 aaPredicted RBP9.89□□□□□ -0.83
CALD1-202ENST00000361901 NOVP48745 357 aa9.89□□□□□ -0.83
CALD1-202ENST00000361901 STAT5BP51692 787 aa9.89□□□□□ -0.83
CALD1-202ENST00000361901 WDR44Q5JSH3 913 aa9.89□□□□□ -0.83
CALD1-202ENST00000361901 FAM160B1Q5W0V3 765 aa9.89□□□□□ -0.83
CALD1-202ENST00000361901 THNSL1Q8IYQ7 743 aa9.89□□□□□ -0.83
CALD1-202ENST00000361901 RETREG2Q8NC44 543 aa9.89□□□□□ -0.83
CALD1-202ENST00000361901 CEP63Q96MT8 703 aa9.89□□□□□ -0.83
CALD1-202ENST00000361901 HAUS4Q9H6D7 363 aa9.89□□□□□ -0.83
CALD1-202ENST00000361901 TMEM206Q9H813 350 aa9.89□□□□□ -0.83
CALD1-202ENST00000361901 ARAP2Q8WZ64 1704 aa9.89□□□□□ -0.83
CALD1-202ENST00000361901 PDXKO00764 312 aa9.89□□□□□ -0.83
CALD1-202ENST00000361901 NKRFO15226 690 aaKnown RBP eCLIP9.89□□□□□ -0.83
CALD1-202ENST00000361901 PFDN1O60925 122 aa9.89□□□□□ -0.83
CALD1-202ENST00000361901 YBX3P16989 372 aaKnown RBP eCLIP9.89□□□□□ -0.83
CALD1-202ENST00000361901 HUNKP57058 714 aa9.89□□□□□ -0.83
CALD1-202ENST00000361901 PDCLQ13371 301 aa9.89□□□□□ -0.83
CALD1-202ENST00000361901 FASTKD5Q7L8L6 764 aaKnown RBP9.89□□□□□ -0.83
CALD1-202ENST00000361901 XXYLT1Q8NBI6 393 aa9.89□□□□□ -0.83
CALD1-202ENST00000361901 TCP11Q8WWU5 503 aa9.89□□□□□ -0.83
CALD1-202ENST00000361901 CLEC4DQ8WXI8 215 aa9.89□□□□□ -0.83
CALD1-202ENST00000361901 LENG9Q96B70 501 aa9.89□□□□□ -0.83
CALD1-202ENST00000361901 IWS1Q96ST2 819 aa9.89□□□□□ -0.83
CALD1-202ENST00000361901 CBWD1Q9BRT8 395 aa9.89□□□□□ -0.83
CALD1-202ENST00000361901 FAM49AQ9H0Q0 323 aaPredicted RBP9.89□□□□□ -0.83
CALD1-202ENST00000361901 PPANQ9NQ55 473 aaKnown RBP9.89□□□□□ -0.83
CALD1-202ENST00000361901 VAV3Q9UKW4 847 aa9.89□□□□□ -0.83
CALD1-202ENST00000361901 DUSP10Q9Y6W6 482 aa9.89□□□□□ -0.83
CALD1-202ENST00000361901 TIAM2Q8IVF5 1701 aa9.89□□□□□ -0.83
CALD1-202ENST00000361901 PITPNM2Q9BZ72 1349 aa9.89□□□□□ -0.83
CALD1-202ENST00000361901 IGLV3-22A0A075B6J6 115 aa9.89□□□□□ -0.83
CALD1-202ENST00000361901 PYGLP06737 847 aa9.89□□□□□ -0.83
CALD1-202ENST00000361901 CYP3A4P08684 503 aa9.89□□□□□ -0.83
CALD1-202ENST00000361901 ACOT2P49753 483 aa9.89□□□□□ -0.83
CALD1-202ENST00000361901 MXI1P50539 228 aa9.89□□□□□ -0.83
CALD1-202ENST00000361901 SNAPC2Q13487 334 aa9.89□□□□□ -0.83
CALD1-202ENST00000361901 UGCGQ16739 394 aa9.89□□□□□ -0.83
CALD1-202ENST00000361901 PPP4R3CPQ6ZMV5 832 aa9.89□□□□□ -0.83
CALD1-202ENST00000361901 ADAT2Q7Z6V5 191 aaKnown RBP9.89□□□□□ -0.83
CALD1-202ENST00000361901 RHPN2Q8IUC4 686 aa9.89□□□□□ -0.83
CALD1-202ENST00000361901 LMBR1Q8WVP7 490 aa9.89□□□□□ -0.83
CALD1-202ENST00000361901 NOX5Q96PH1 765 aa9.89□□□□□ -0.83
CALD1-202ENST00000361901 OSBPL9Q96SU4 736 aa9.89□□□□□ -0.83
CALD1-202ENST00000361901 ATP6V0A4Q9HBG4 840 aa9.89□□□□□ -0.83
CALD1-202ENST00000361901 BATF3Q9NR55 127 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms